prot_H-elongata_contig75883.15274.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig75883.15274.1
Unique Nameprot_H-elongata_contig75883.15274.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length124
Homology
BLAST of mRNA_H-elongata_contig75883.15274.1 vs. uniprot
Match: A0A6H5L4K3_9PHAE (PCI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4K3_9PHAE)

HSP 1 Score: 215 bits (548), Expect = 5.750e-67
Identity = 108/121 (89.26%), Postives = 113/121 (93.39%), Query Frame = 0
Query:    2 MSAQPALVNRAIFTKEKIALLCLMNMVFERQSQDRNIPFEEIATRTKLPVDQVEWLVMRAMSLKLVKGVMDEVERLVHVTWVQPRVLDNKQLACLNDRLEEWRGRVGKAHLYVEEQTPELF 122
            MSAQPALV+RA FTKEKIALLCLMNMVFER SQDRNIPFEEIA RTKLPVDQVEWLVMRAMSLKLVKGVMDEVERLVHV+WVQPRVL+N QLA L DRL EWRGRV +AH+YVEEQTPELF
Sbjct:  258 MSAQPALVSRATFTKEKIALLCLMNMVFERHSQDRNIPFEEIAARTKLPVDQVEWLVMRAMSLKLVKGVMDEVERLVHVSWVQPRVLENSQLARLADRLGEWRGRVDEAHVYVEEQTPELF 378          
BLAST of mRNA_H-elongata_contig75883.15274.1 vs. uniprot
Match: A0A836CML5_9STRA (26S proteasome subunit like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CML5_9STRA)

HSP 1 Score: 162 bits (411), Expect = 2.010e-46
Identity = 78/120 (65.00%), Postives = 95/120 (79.17%), Query Frame = 0
Query:    3 SAQPALVNRAIFTKEKIALLCLMNMVFERQSQDRNIPFEEIATRTKLPVDQVEWLVMRAMSLKLVKGVMDEVERLVHVTWVQPRVLDNKQLACLNDRLEEWRGRVGKAHLYVEEQTPELF 122
            ++QP L  RA F KEK+AL+CL+NMVFER S +R+ PF E+A RT+LP+DQVEWLVMRAMS  LV+GVMDEV ++VHVTWVQPRVLD +Q+  L  RLE W+  VG A  Y+E QTPELF
Sbjct:  260 ASQPVLATRAEFVKEKMALMCLVNMVFERSSHERDFPFAEVAKRTRLPLDQVEWLVMRAMSQGLVRGVMDEVAQVVHVTWVQPRVLDRQQIGHLEARLESWKTSVGSALQYMETQTPELF 379          
BLAST of mRNA_H-elongata_contig75883.15274.1 vs. uniprot
Match: A0A484E6Y0_BRELC (PCI domain-containing protein n=2 Tax=Peronosporaceae TaxID=4777 RepID=A0A484E6Y0_BRELC)

HSP 1 Score: 154 bits (389), Expect = 4.000e-43
Identity = 76/119 (63.87%), Postives = 93/119 (78.15%), Query Frame = 0
Query:    4 AQPALVNRAIFTKEKIALLCLMNMVFERQSQDRNIPFEEIATRTKLPVDQVEWLVMRAMSLKLVKGVMDEVERLVHVTWVQPRVLDNKQLACLNDRLEEWRGRVGKAHLYVEEQTPELF 122
            AQPALV++  + KEK+ALL LM +VF+R S +RNIPF EIA  T+LP++QVEWLVMRA+S KL+KG +DEV+ +V VTWVQPRVLDN QL  L  RL+ W  +V    LYVEEQTPELF
Sbjct:  264 AQPALVSKQAYMKEKVALLALMVLVFQRPSHERNIPFYEIAETTRLPLEQVEWLVMRALSCKLIKGSIDEVDGIVRVTWVQPRVLDNSQLQKLVTRLDGWEKKVNSTLLYVEEQTPELF 382          
BLAST of mRNA_H-elongata_contig75883.15274.1 vs. uniprot
Match: G4YXL1_PHYSP (PCI domain-containing protein n=18 Tax=Peronosporaceae TaxID=4777 RepID=G4YXL1_PHYSP)

HSP 1 Score: 153 bits (387), Expect = 7.920e-43
Identity = 75/120 (62.50%), Postives = 94/120 (78.33%), Query Frame = 0
Query:    3 SAQPALVNRAIFTKEKIALLCLMNMVFERQSQDRNIPFEEIATRTKLPVDQVEWLVMRAMSLKLVKGVMDEVERLVHVTWVQPRVLDNKQLACLNDRLEEWRGRVGKAHLYVEEQTPELF 122
            +AQPALV++  + KEK+ALL LM +VF+R S +RNIPF EIA  T+LP++QVEWLVMRA+S KL+KG +D+V+ +V VTWVQPRVLDN QL  L  RL+ W  +V    LYVEEQTPELF
Sbjct:  263 NAQPALVSKQEYVKEKVALLALMVLVFQRPSHERNIPFHEIAEATRLPLEQVEWLVMRALSCKLIKGSIDQVDGIVRVTWVQPRVLDNSQLQELVTRLDGWEKKVNSTLLYVEEQTPELF 382          
BLAST of mRNA_H-elongata_contig75883.15274.1 vs. uniprot
Match: A0A7S2V5A0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5A0_9STRA)

HSP 1 Score: 153 bits (386), Expect = 1.070e-42
Identity = 76/120 (63.33%), Postives = 95/120 (79.17%), Query Frame = 0
Query:    4 AQPALVNRAIFTKEKIALLCLMNMVFERQSQDRNIPFEEIATRTKLPVDQVEWLVMRAMSLKLVKGVMDEVERLVHVTWVQPRVLDNKQLACLNDRLEEWRGRVGKAHLYVEEQTPELFD 123
            AQ AL +R    KEK+ALLCLMNMVFER S  RNI FEEIA RT+LP+DQVEWLVMRAMSL L+KG+MD V++ + V+WVQPRVL+N QL  L +RLE+W+     A +++E+QTPELF+
Sbjct:  262 AQVALSSREDVVKEKMALLCLMNMVFERPSHQRNIKFEEIAQRTRLPLDQVEWLVMRAMSLGLIKGIMDGVDQELSVSWVQPRVLENAQLKHLGERLEKWQNVSNNALIFMEDQTPELFN 381          
BLAST of mRNA_H-elongata_contig75883.15274.1 vs. uniprot
Match: A0A7S2BH76_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BH76_9STRA)

HSP 1 Score: 152 bits (383), Expect = 4.470e-42
Identity = 75/119 (63.03%), Postives = 91/119 (76.47%), Query Frame = 0
Query:    4 AQPALVNRAIFTKEKIALLCLMNMVFERQSQDRNIPFEEIATRTKLPVDQVEWLVMRAMSLKLVKGVMDEVERLVHVTWVQPRVLDNKQLACLNDRLEEWRGRVGKAHLYVEEQTPELF 122
            AQPAL  R  F KEK+ALL LMN +FE  S DRNIPF  IA RT+LP+DQVEWL MRAMSL+L+KG MDEV++++HV WVQPRVLDN Q++ L DRL EW  +V  A  ++ +QTPEL 
Sbjct:  282 AQPALKLRHNFIKEKLALLSLMNFLFETPSHDRNIPFAAIADRTRLPLDQVEWLAMRAMSLELIKGSMDEVDQILHVDWVQPRVLDNDQMSHLADRLGEWSEKVATASNFITDQTPELL 400          
BLAST of mRNA_H-elongata_contig75883.15274.1 vs. uniprot
Match: A0A3R7J303_9STRA (PCI domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J303_9STRA)

HSP 1 Score: 150 bits (378), Expect = 1.680e-41
Identity = 73/120 (60.83%), Postives = 93/120 (77.50%), Query Frame = 0
Query:    3 SAQPALVNRAIFTKEKIALLCLMNMVFERQSQDRNIPFEEIATRTKLPVDQVEWLVMRAMSLKLVKGVMDEVERLVHVTWVQPRVLDNKQLACLNDRLEEWRGRVGKAHLYVEEQTPELF 122
            +AQPALV++  + KEK+ALL LM +VF+R S +RNIPF EIA  T+LP++QVEWLVMRA+S KL+KG +D+V+ +V VTWVQPRVLD+ QL  L  R + W  +V    LYVEEQTPELF
Sbjct:  262 NAQPALVSKQEYVKEKVALLALMVLVFQRPSHERNIPFHEIAEVTRLPLEQVEWLVMRALSCKLIKGSIDQVDNIVRVTWVQPRVLDSSQLQELVTRFDGWEKKVNSTLLYVEEQTPELF 381          
BLAST of mRNA_H-elongata_contig75883.15274.1 vs. uniprot
Match: H3HCI8_PHYRM (PCI domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HCI8_PHYRM)

HSP 1 Score: 154 bits (390), Expect = 2.830e-41
Identity = 75/120 (62.50%), Postives = 94/120 (78.33%), Query Frame = 0
Query:    3 SAQPALVNRAIFTKEKIALLCLMNMVFERQSQDRNIPFEEIATRTKLPVDQVEWLVMRAMSLKLVKGVMDEVERLVHVTWVQPRVLDNKQLACLNDRLEEWRGRVGKAHLYVEEQTPELF 122
            +AQPALV++  + KEK+ALL LM +VF+R S +RNIPF EIA  T+LP++QVEWLVMRA+S KL+KG +D+V+ +V VTWVQPRVLDN QL  L  RL+ W  +V    LYVEEQTPELF
Sbjct:  677 NAQPALVSKQEYVKEKVALLALMVLVFKRPSHERNIPFHEIAEATRLPLEQVEWLVMRALSCKLIKGTIDQVDAIVRVTWVQPRVLDNSQLQELVSRLDGWEKKVNSTLLYVEEQTPELF 796          
BLAST of mRNA_H-elongata_contig75883.15274.1 vs. uniprot
Match: M4B5F7_HYAAE (PCI domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B5F7_HYAAE)

HSP 1 Score: 149 bits (375), Expect = 4.760e-41
Identity = 74/120 (61.67%), Postives = 91/120 (75.83%), Query Frame = 0
Query:    3 SAQPALVNRAIFTKEKIALLCLMNMVFERQSQDRNIPFEEIATRTKLPVDQVEWLVMRAMSLKLVKGVMDEVERLVHVTWVQPRVLDNKQLACLNDRLEEWRGRVGKAHLYVEEQTPELF 122
            +AQPALV +  + KEK+ALL LM +VF+R S +RNI F EIA  T+LP DQVEW+VMRA+S KL+KG +D+V+ +V VTWVQPRVLDN QL  L  RL+ W  +V    LYVEEQTPELF
Sbjct:  263 NAQPALVTKQEYVKEKVALLALMVLVFQRPSHERNISFREIAEATRLPQDQVEWVVMRALSCKLIKGSIDQVDGIVRVTWVQPRVLDNSQLQELVARLDGWEKKVNSTLLYVEEQTPELF 382          
BLAST of mRNA_H-elongata_contig75883.15274.1 vs. uniprot
Match: A0A8K1CIP6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIP6_PYTOL)

HSP 1 Score: 148 bits (374), Expect = 6.700e-41
Identity = 73/120 (60.83%), Postives = 92/120 (76.67%), Query Frame = 0
Query:    3 SAQPALVNRAIFTKEKIALLCLMNMVFERQSQDRNIPFEEIATRTKLPVDQVEWLVMRAMSLKLVKGVMDEVERLVHVTWVQPRVLDNKQLACLNDRLEEWRGRVGKAHLYVEEQTPELF 122
            ++QPAL  +  + KEK+ALL LM +VF+R S +RNI F EIA  T+LPV+QVEWLVMRA+SL L+KG +D+V+ +V V+WVQPRVLDN QL  L DRL+ W  +V    LYVEEQTPELF
Sbjct:  263 NSQPALATKREYIKEKVALLALMVLVFQRPSHERNISFVEIAEVTRLPVEQVEWLVMRALSLNLIKGSIDQVDAIVRVSWVQPRVLDNSQLKELADRLDSWGKKVNSTLLYVEEQTPELF 382          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig75883.15274.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4K3_9PHAE5.750e-6789.26PCI domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836CML5_9STRA2.010e-4665.0026S proteasome subunit like protein n=1 Tax=Tribon... [more]
A0A484E6Y0_BRELC4.000e-4363.87PCI domain-containing protein n=2 Tax=Peronosporac... [more]
G4YXL1_PHYSP7.920e-4362.50PCI domain-containing protein n=18 Tax=Peronospora... [more]
A0A7S2V5A0_9STRA1.070e-4263.33Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2BH76_9STRA4.470e-4263.03Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A3R7J303_9STRA1.680e-4160.83PCI domain-containing protein n=3 Tax=Phytophthora... [more]
H3HCI8_PHYRM2.830e-4162.50PCI domain-containing protein n=1 Tax=Phytophthora... [more]
M4B5F7_HYAAE4.760e-4161.67PCI domain-containing protein n=1 Tax=Hyaloperonos... [more]
A0A8K1CIP6_PYTOL6.700e-4160.83Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00753PINTcoord: 10..103
e-value: 6.4E-12
score: 55.6
NoneNo IPR availableGENE3D1.25.40.570coord: 1..86
e-value: 3.6E-30
score: 107.0
NoneNo IPR availablePANTHERPTHR10539:SF026S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13coord: 2..122
IPR000717Proteasome component (PCI) domainSMARTSM00088PINT_4coord: 10..103
e-value: 6.4E-12
score: 55.6
IPR000717Proteasome component (PCI) domainPFAMPF01399PCIcoord: 18..81
e-value: 1.4E-6
score: 28.7
IPR03529826S Proteasome non-ATPase regulatory subunit 13PANTHERPTHR1053926S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13coord: 2..122
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 36..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig75883contigH-elongata_contig75883:1889..2747 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig75883.15274.1mRNA_H-elongata_contig75883.15274.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig75883 1889..2753 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig75883.15274.1 ID=prot_H-elongata_contig75883.15274.1|Name=mRNA_H-elongata_contig75883.15274.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=124bp
MMSAQPALVNRAIFTKEKIALLCLMNMVFERQSQDRNIPFEEIATRTKLP
VDQVEWLVMRAMSLKLVKGVMDEVERLVHVTWVQPRVLDNKQLACLNDRL
EEWRGRVGKAHLYVEEQTPELFD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000717PCI_dom
IPR035298PSMD13
IPR036390WH_DNA-bd_sf