mRNA_H-elongata_contig75883.15274.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig75883.15274.1 vs. uniprot
Match: A0A6H5L4K3_9PHAE (PCI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4K3_9PHAE) HSP 1 Score: 216 bits (549), Expect = 4.410e-67 Identity = 108/121 (89.26%), Postives = 113/121 (93.39%), Query Frame = 1
Query: 10 MSAQPALVNRAIFTKEKIALLCLMNMVFERQSQDRNIPFEEIATRTKLPVDQVEWLVMRAMSLKLVKGVMDEVERLVHVTWVQPRVLDNKQLACLNDRLEEWRGRVGKAHLYVEEQTPELF 372
MSAQPALV+RA FTKEKIALLCLMNMVFER SQDRNIPFEEIA RTKLPVDQVEWLVMRAMSLKLVKGVMDEVERLVHV+WVQPRVL+N QLA L DRL EWRGRV +AH+YVEEQTPELF
Sbjct: 258 MSAQPALVSRATFTKEKIALLCLMNMVFERHSQDRNIPFEEIAARTKLPVDQVEWLVMRAMSLKLVKGVMDEVERLVHVSWVQPRVLENSQLARLADRLGEWRGRVDEAHVYVEEQTPELF 378
BLAST of mRNA_H-elongata_contig75883.15274.1 vs. uniprot
Match: A0A836CML5_9STRA (26S proteasome subunit like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CML5_9STRA) HSP 1 Score: 163 bits (412), Expect = 1.540e-46 Identity = 78/121 (64.46%), Postives = 96/121 (79.34%), Query Frame = 1
Query: 10 MSAQPALVNRAIFTKEKIALLCLMNMVFERQSQDRNIPFEEIATRTKLPVDQVEWLVMRAMSLKLVKGVMDEVERLVHVTWVQPRVLDNKQLACLNDRLEEWRGRVGKAHLYVEEQTPELF 372
+++QP L RA F KEK+AL+CL+NMVFER S +R+ PF E+A RT+LP+DQVEWLVMRAMS LV+GVMDEV ++VHVTWVQPRVLD +Q+ L RLE W+ VG A Y+E QTPELF
Sbjct: 259 IASQPVLATRAEFVKEKMALMCLVNMVFERSSHERDFPFAEVAKRTRLPLDQVEWLVMRAMSQGLVRGVMDEVAQVVHVTWVQPRVLDRQQIGHLEARLESWKTSVGSALQYMETQTPELF 379
BLAST of mRNA_H-elongata_contig75883.15274.1 vs. uniprot
Match: G4YXL1_PHYSP (PCI domain-containing protein n=18 Tax=Peronosporaceae TaxID=4777 RepID=G4YXL1_PHYSP) HSP 1 Score: 154 bits (389), Expect = 4.330e-43 Identity = 76/123 (61.79%), Postives = 95/123 (77.24%), Query Frame = 1
Query: 4 KMMSAQPALVNRAIFTKEKIALLCLMNMVFERQSQDRNIPFEEIATRTKLPVDQVEWLVMRAMSLKLVKGVMDEVERLVHVTWVQPRVLDNKQLACLNDRLEEWRGRVGKAHLYVEEQTPELF 372
K +AQPALV++ + KEK+ALL LM +VF+R S +RNIPF EIA T+LP++QVEWLVMRA+S KL+KG +D+V+ +V VTWVQPRVLDN QL L RL+ W +V LYVEEQTPELF
Sbjct: 260 KEFNAQPALVSKQEYVKEKVALLALMVLVFQRPSHERNIPFHEIAEATRLPLEQVEWLVMRALSCKLIKGSIDQVDGIVRVTWVQPRVLDNSQLQELVTRLDGWEKKVNSTLLYVEEQTPELF 382
BLAST of mRNA_H-elongata_contig75883.15274.1 vs. uniprot
Match: A0A484E6Y0_BRELC (PCI domain-containing protein n=2 Tax=Peronosporaceae TaxID=4777 RepID=A0A484E6Y0_BRELC) HSP 1 Score: 154 bits (389), Expect = 4.330e-43 Identity = 76/119 (63.87%), Postives = 93/119 (78.15%), Query Frame = 1
Query: 16 AQPALVNRAIFTKEKIALLCLMNMVFERQSQDRNIPFEEIATRTKLPVDQVEWLVMRAMSLKLVKGVMDEVERLVHVTWVQPRVLDNKQLACLNDRLEEWRGRVGKAHLYVEEQTPELF 372
AQPALV++ + KEK+ALL LM +VF+R S +RNIPF EIA T+LP++QVEWLVMRA+S KL+KG +DEV+ +V VTWVQPRVLDN QL L RL+ W +V LYVEEQTPELF
Sbjct: 264 AQPALVSKQAYMKEKVALLALMVLVFQRPSHERNIPFYEIAETTRLPLEQVEWLVMRALSCKLIKGSIDEVDGIVRVTWVQPRVLDNSQLQKLVTRLDGWEKKVNSTLLYVEEQTPELF 382
BLAST of mRNA_H-elongata_contig75883.15274.1 vs. uniprot
Match: A0A7S2V5A0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5A0_9STRA) HSP 1 Score: 153 bits (387), Expect = 8.220e-43 Identity = 77/125 (61.60%), Postives = 96/125 (76.80%), Query Frame = 1
Query: 1 RKMMSAQPALVNRAIFTKEKIALLCLMNMVFERQSQDRNIPFEEIATRTKLPVDQVEWLVMRAMSLKLVKGVMDEVERLVHVTWVQPRVLDNKQLACLNDRLEEWRGRVGKAHLYVEEQTPELFD 375
R AQ AL +R KEK+ALLCLMNMVFER S RNI FEEIA RT+LP+DQVEWLVMRAMSL L+KG+MD V++ + V+WVQPRVL+N QL L +RLE+W+ A +++E+QTPELF+
Sbjct: 257 RPAFDAQVALSSREDVVKEKMALLCLMNMVFERPSHQRNIKFEEIAQRTRLPLDQVEWLVMRAMSLGLIKGIMDGVDQELSVSWVQPRVLENAQLKHLGERLEKWQNVSNNALIFMEDQTPELFN 381
BLAST of mRNA_H-elongata_contig75883.15274.1 vs. uniprot
Match: A0A7S2BH76_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BH76_9STRA) HSP 1 Score: 152 bits (383), Expect = 4.830e-42 Identity = 75/119 (63.03%), Postives = 91/119 (76.47%), Query Frame = 1
Query: 16 AQPALVNRAIFTKEKIALLCLMNMVFERQSQDRNIPFEEIATRTKLPVDQVEWLVMRAMSLKLVKGVMDEVERLVHVTWVQPRVLDNKQLACLNDRLEEWRGRVGKAHLYVEEQTPELF 372
AQPAL R F KEK+ALL LMN +FE S DRNIPF IA RT+LP+DQVEWL MRAMSL+L+KG MDEV++++HV WVQPRVLDN Q++ L DRL EW +V A ++ +QTPEL
Sbjct: 282 AQPALKLRHNFIKEKLALLSLMNFLFETPSHDRNIPFAAIADRTRLPLDQVEWLAMRAMSLELIKGSMDEVDQILHVDWVQPRVLDNDQMSHLADRLGEWSEKVATASNFITDQTPELL 400
BLAST of mRNA_H-elongata_contig75883.15274.1 vs. uniprot
Match: A0A3R7J303_9STRA (PCI domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J303_9STRA) HSP 1 Score: 150 bits (380), Expect = 9.160e-42 Identity = 74/123 (60.16%), Postives = 94/123 (76.42%), Query Frame = 1
Query: 4 KMMSAQPALVNRAIFTKEKIALLCLMNMVFERQSQDRNIPFEEIATRTKLPVDQVEWLVMRAMSLKLVKGVMDEVERLVHVTWVQPRVLDNKQLACLNDRLEEWRGRVGKAHLYVEEQTPELF 372
K +AQPALV++ + KEK+ALL LM +VF+R S +RNIPF EIA T+LP++QVEWLVMRA+S KL+KG +D+V+ +V VTWVQPRVLD+ QL L R + W +V LYVEEQTPELF
Sbjct: 259 KEFNAQPALVSKQEYVKEKVALLALMVLVFQRPSHERNIPFHEIAEVTRLPLEQVEWLVMRALSCKLIKGSIDQVDNIVRVTWVQPRVLDSSQLQELVTRFDGWEKKVNSTLLYVEEQTPELF 381
BLAST of mRNA_H-elongata_contig75883.15274.1 vs. uniprot
Match: H3HCI8_PHYRM (PCI domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HCI8_PHYRM) HSP 1 Score: 155 bits (392), Expect = 1.630e-41 Identity = 76/123 (61.79%), Postives = 95/123 (77.24%), Query Frame = 1
Query: 4 KMMSAQPALVNRAIFTKEKIALLCLMNMVFERQSQDRNIPFEEIATRTKLPVDQVEWLVMRAMSLKLVKGVMDEVERLVHVTWVQPRVLDNKQLACLNDRLEEWRGRVGKAHLYVEEQTPELF 372
K +AQPALV++ + KEK+ALL LM +VF+R S +RNIPF EIA T+LP++QVEWLVMRA+S KL+KG +D+V+ +V VTWVQPRVLDN QL L RL+ W +V LYVEEQTPELF
Sbjct: 674 KEFNAQPALVSKQEYVKEKVALLALMVLVFKRPSHERNIPFHEIAEATRLPLEQVEWLVMRALSCKLIKGTIDQVDAIVRVTWVQPRVLDNSQLQELVSRLDGWEKKVNSTLLYVEEQTPELF 796
BLAST of mRNA_H-elongata_contig75883.15274.1 vs. uniprot
Match: M4B5F7_HYAAE (PCI domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B5F7_HYAAE) HSP 1 Score: 149 bits (377), Expect = 2.600e-41 Identity = 75/123 (60.98%), Postives = 92/123 (74.80%), Query Frame = 1
Query: 4 KMMSAQPALVNRAIFTKEKIALLCLMNMVFERQSQDRNIPFEEIATRTKLPVDQVEWLVMRAMSLKLVKGVMDEVERLVHVTWVQPRVLDNKQLACLNDRLEEWRGRVGKAHLYVEEQTPELF 372
K +AQPALV + + KEK+ALL LM +VF+R S +RNI F EIA T+LP DQVEW+VMRA+S KL+KG +D+V+ +V VTWVQPRVLDN QL L RL+ W +V LYVEEQTPELF
Sbjct: 260 KEFNAQPALVTKQEYVKEKVALLALMVLVFQRPSHERNISFREIAEATRLPQDQVEWVVMRALSCKLIKGSIDQVDGIVRVTWVQPRVLDNSQLQELVARLDGWEKKVNSTLLYVEEQTPELF 382
BLAST of mRNA_H-elongata_contig75883.15274.1 vs. uniprot
Match: A0A8K1CIP6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIP6_PYTOL) HSP 1 Score: 148 bits (374), Expect = 7.240e-41 Identity = 73/120 (60.83%), Postives = 92/120 (76.67%), Query Frame = 1
Query: 13 SAQPALVNRAIFTKEKIALLCLMNMVFERQSQDRNIPFEEIATRTKLPVDQVEWLVMRAMSLKLVKGVMDEVERLVHVTWVQPRVLDNKQLACLNDRLEEWRGRVGKAHLYVEEQTPELF 372
++QPAL + + KEK+ALL LM +VF+R S +RNI F EIA T+LPV+QVEWLVMRA+SL L+KG +D+V+ +V V+WVQPRVLDN QL L DRL+ W +V LYVEEQTPELF
Sbjct: 263 NSQPALATKREYIKEKVALLALMVLVFQRPSHERNISFVEIAEVTRLPVEQVEWLVMRALSLNLIKGSIDQVDAIVRVSWVQPRVLDNSQLKELADRLDSWGKKVNSTLLYVEEQTPELF 382 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig75883.15274.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig75883.15274.1 >prot_H-elongata_contig75883.15274.1 ID=prot_H-elongata_contig75883.15274.1|Name=mRNA_H-elongata_contig75883.15274.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=124bp MMSAQPALVNRAIFTKEKIALLCLMNMVFERQSQDRNIPFEEIATRTKLPback to top mRNA from alignment at H-elongata_contig75883:1889..2753- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig75883.15274.1 ID=mRNA_H-elongata_contig75883.15274.1|Name=mRNA_H-elongata_contig75883.15274.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=865bp|location=Sequence derived from alignment at H-elongata_contig75883:1889..2753- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig75883:1889..2753- >mRNA_H-elongata_contig75883.15274.1 ID=mRNA_H-elongata_contig75883.15274.1|Name=mRNA_H-elongata_contig75883.15274.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=744bp|location=Sequence derived from alignment at H-elongata_contig75883:1889..2753- (Himanthalia elongata Himel1 dioecious)back to top |