prot_H-elongata_contig75866.15272.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig75866.15272.1
Unique Nameprot_H-elongata_contig75866.15272.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length147
Homology
BLAST of mRNA_H-elongata_contig75866.15272.1 vs. uniprot
Match: D7FH27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH27_ECTSI)

HSP 1 Score: 241 bits (614), Expect = 4.770e-78
Identity = 117/140 (83.57%), Postives = 128/140 (91.43%), Query Frame = 0
Query:    7 QGDPKRAASWFPLVGKCYDSLEDVINNWEKYTLRQDGDAIRRMIGTVGVSSPLSSLRKAFVSIRDAEEESQGDVDVMAYVEAYMEVLTALGDAENDLYSANFADYAGGGGTTGSQFIAKANKSLKIAEARFKEVNGILGI 146
            +G+PK AASWFPL+ KCY SLEDV+ NWEKYT RQDGDAIRR+IGT+GVSSPLSS+RKAF SIRDAEE SQGD+DV+ YVEAYMEVLTALGDAENDLYSANFADY+GGGGT GSQFIAKANKSLKIA+  FKEVN ILGI
Sbjct:  124 EGNPKEAASWFPLLAKCYQSLEDVLENWEKYTARQDGDAIRRLIGTIGVSSPLSSIRKAFTSIRDAEEASQGDIDVIEYVEAYMEVLTALGDAENDLYSANFADYSGGGGTKGSQFIAKANKSLKIAKDEFKEVNKILGI 263          
BLAST of mRNA_H-elongata_contig75866.15272.1 vs. uniprot
Match: A0A835ZH00_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH00_9STRA)

HSP 1 Score: 143 bits (361), Expect = 4.540e-41
Identity = 73/135 (54.07%), Postives = 99/135 (73.33%), Query Frame = 0
Query:    8 GDPKRAASWFPLVGKCYDSLEDVINNWEKYTLR--QDGDAIRRMIGTVGVSSPLSSLRKAFVSIRDAEEESQGDVDVMAYVEAYMEVLTALGDAENDLYSANFADYAGGGGTTGSQFIAKANKSLKIAEARFKEV 140
            GDPK AASWFPL+   Y +L+D++ NW+        DGDA+RR IGTVGVSSPLS+++K F +IRD+E+ ++ ++D+  +VEAY  VLT L DAENDLYSANFAD++GGG   G+ FI  A KS+  A+  F+E+
Sbjct:   18 GDPKVAASWFPLLKLQYAALKDLLANWDAVAPAGSTDGDAVRRKIGTVGVSSPLSAVKKTFSAIRDSEDVAE-EIDLADFVEAYQAVLTDLSDAENDLYSANFADFSGGGQLKGTNFIKAAKKSIAAAKLNFEEI 151          
BLAST of mRNA_H-elongata_contig75866.15272.1 vs. uniprot
Match: A0A7S2UXU3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXU3_9STRA)

HSP 1 Score: 112 bits (279), Expect = 9.680e-28
Identity = 60/137 (43.80%), Postives = 85/137 (62.04%), Query Frame = 0
Query:    8 GDPKRAASWFPLVGKCYDSLEDVINNWEKYTLRQDGDAIRRMIGTVGVSSPLSSLRKAFVSIRDAEEESQGDVDVMAYVEAYMEVLTALGDAENDLYSANFADYAGGGGTTGSQFIAKANKSLKIAEARFKEVNGIL 144
            G+PK   +W P V   Y  LE ++ NW++   + +GD +RR +GTVGVSS L+S +KA   +RDA +      D + + E   EV+T LGDAEND YSANFA+++GGG    +QFI KA   +K A   +K V G++
Sbjct:  103 GNPKSYKTWAPQVRDGYKRLEIMVENWDEIAAKDNGDEMRRFLGTVGVSSSLTSFKKALYGVRDAVD-LPSSFDEIEWAEKAEEVVTCLGDAENDFYSANFAEFSGGGQLKSAQFIKKARPFVKKA---YKIVGGMV 235          
BLAST of mRNA_H-elongata_contig75866.15272.1 vs. uniprot
Match: A0A7S4DIQ5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DIQ5_HETAK)

HSP 1 Score: 107 bits (266), Expect = 7.140e-26
Identity = 57/135 (42.22%), Postives = 85/135 (62.96%), Query Frame = 0
Query:    8 GDPKRAASWFPLVGKCYDSLEDVINNWEKYTLRQDGDAIRRMIGTVGVSSPLS--SLRKAFVSIRDAEEESQGDVDVMAYVEAYMEVLTALGDAENDLYSANFADYAGGGGTTGSQFIAKANKSLKIAEARFKEV 140
            G P   ++W   + +    L +V+ NW+   LR +GD +R+ IGTVG  S L+  SL++AF+ + +A++     VD+  Y E Y EVLTAL DAEN+ YSANFAD++GGG    SQFI ++ K + +A+   KE+
Sbjct:   95 GPPASFSTWLAQLEEGEKILVNVLQNWKDLELRDNGDEVRKFIGTVGPVSALNPVSLKRAFLKLAEADDFPDY-VDLDEYAEKYEEVLTALADAENEAYSANFADFSGGGQLKSSQFIKRSQKRIAVAQRALKEI 228          
BLAST of mRNA_H-elongata_contig75866.15272.1 vs. uniprot
Match: A0A5J4Z903_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z903_PORPP)

HSP 1 Score: 70.1 bits (170), Expect = 8.070e-12
Identity = 43/123 (34.96%), Postives = 64/123 (52.03%), Query Frame = 0
Query:   24 YDSLEDVINNWEKYTLRQDGDAIRRMIGTVGVSSPLSSLRKAFVSIRDA--EEESQGDVDVMAYVEAYMEVLTALGDAENDLYSANFADYAGGGGTTGSQFIAKANKSLKIAEARFKEVNGIL 144
            YD + D+  NW + T   DGD +RR +GTVG SSPL +++KAF+++  +  E +   D D+    E Y  VL  +   +  LYS NF++       T  + I    K+L      +KEV  IL
Sbjct:  104 YDVMLDLERNWTERTKAFDGDIVRRYLGTVGKSSPLFNIKKAFMAVWKSLSERDDVSDADLEELNEKYNLVLDGISGVDFQLYSVNFSELR----PTKEKLIEDGKKALDKTVGIYKEVLAIL 222          
BLAST of mRNA_H-elongata_contig75866.15272.1 vs. uniprot
Match: A0A2V3IQN4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQN4_9FLOR)

HSP 1 Score: 66.6 bits (161), Expect = 4.420e-11
Identity = 34/108 (31.48%), Postives = 60/108 (55.56%), Query Frame = 0
Query:    4 ISRQGDPKRAASWFPLVGKCYDSLEDVINNWEKYTLRQDGDAIRRMIGTVGVSSPLSSLRKAFVSIRDAEEESQGDVDVMAYVEA-YMEVLTALGDAENDLYSANFAD 110
             S  GDPK+  ++ P +   Y +L  +  +WE  T   DGD +RR++GTVGV SPL ++RK  +       ++  D +++  +E  + +V+  +   +  LYSA+F +
Sbjct:   10 FSTTGDPKKLETYLPQIEAGYQALLGLDRDWEAKTKDFDGDVVRRVLGTVGVKSPLFNIRKPLLKSWQIVADTSTDDELIERLETEWNDVINGISSIDFQLYSASFTE 117          
BLAST of mRNA_H-elongata_contig75866.15272.1 vs. uniprot
Match: A0A813JFT0_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JFT0_POLGL)

HSP 1 Score: 51.2 bits (121), Expect = 8.780e-5
Identity = 33/95 (34.74%), Postives = 54/95 (56.84%), Query Frame = 0
Query:   19 LVGKCYDSLEDVINNWEKYTLRQDGDAIRRMIGTVGVSSPLSSLRKAFVSIRDAEEESQGDVDVMAYVEAYMEVLTALGDAENDLYSANFADYAG 113
            ++ +   +L D + NW +  +  DGD+IRR++GTVG +SP+ +L +A  S+      +  + D++   EA   V   L  A+   YSANFAD +G
Sbjct:  124 ILSRSEAALADALKNWSR--VAADGDSIRRVLGTVGATSPVYALPRAMRSL------TAENFDILEQTEA---VEFHLRQADFLAYSANFADSSG 207          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig75866.15272.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FH27_ECTSI4.770e-7883.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZH00_9STRA4.540e-4154.07Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2UXU3_9STRA9.680e-2843.80Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S4DIQ5_HETAK7.140e-2642.22Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A5J4Z903_PORPP8.070e-1234.96Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A2V3IQN4_9FLOR4.420e-1131.48Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A813JFT0_POLGL8.780e-534.74Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig75866contigH-elongata_contig75866:880..2790 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig75866.15272.1mRNA_H-elongata_contig75866.15272.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig75866 880..2790 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig75866.15272.1 ID=prot_H-elongata_contig75866.15272.1|Name=mRNA_H-elongata_contig75866.15272.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=147bp
MTYISRQGDPKRAASWFPLVGKCYDSLEDVINNWEKYTLRQDGDAIRRMI
GTVGVSSPLSSLRKAFVSIRDAEEESQGDVDVMAYVEAYMEVLTALGDAE
NDLYSANFADYAGGGGTTGSQFIAKANKSLKIAEARFKEVNGILGI*
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