prot_H-elongata_contig75843.15270.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig75843.15270.1
Unique Nameprot_H-elongata_contig75843.15270.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length140
Homology
BLAST of mRNA_H-elongata_contig75843.15270.1 vs. uniprot
Match: A0A6A4BX04_9STRA (Reverse transcriptase domain-containing protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4BX04_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 3.730e-16
Identity = 49/127 (38.58%), Postives = 68/127 (53.54%), Query Frame = 0
Query:   14 GRPEGYVAKLEEIVLGECFDGFRRALTGEPPARVAPMRVKLKQGADLTQVKAKPRVYPPEKSVWLKEHFELLCETGMVYPNPQAVCASVTMAFPKGSGKGYRLVADFSPINGQCELMPGPMLNPDIE 140
            G P  Y+ +L  I     FD +R  L  +PPARV PMR++LK GA     K K R YPPE   +++E  + L E G +Y NP +  A   +   K    GYR  AD+ P+N Q + + G M NP ++
Sbjct:  134 GFPAEYLGELHRIATR--FDLWRAQLGRDPPARVPPMRIRLKPGAK--PYKCKARKYPPEVRHFMEEFNQKLEELGWIYENPNSRWACPALPVRKSGSDGYRQTADYKPVNIQVDGIAGVMPNPQVD 256          
BLAST of mRNA_H-elongata_contig75843.15270.1 vs. uniprot
Match: A0A6G0WYM7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WYM7_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 1.930e-15
Identity = 53/136 (38.97%), Postives = 70/136 (51.47%), Query Frame = 0
Query:    1 EALVSALRAAVETGRPEGYVAKLEEIVLGECFDGFRRALTGEPPARVAPMRVKLKQGADLTQVKAKPRVYPPEKSVWLKEHFELLCETGMVYPNPQAVCASVTMAFPKGSGKGYRLVADFSPINGQCELMPGPMLN 136
            E L   +  AVE G P G V +L  I L    D FR     +PP +VAP++V+LK+GA    VK   R YPP    +L++H   L   G++Y N +A  A+     PK +   YR+  D  PIN   E MP PM N
Sbjct:   42 EVLEQKVAEAVEQGLPPGQVDELRRI-LRAYQDVFRLDFGKDPPVKVAPLKVRLKEGA--VPVKVGLRRYPPAHMDYLRQHVAELEAAGLIYRNNRATWAAAPRIVPKKNPGEYRMTIDSRPINAWTEAMPWPMPN 174          
BLAST of mRNA_H-elongata_contig75843.15270.1 vs. uniprot
Match: A0A6G0JSB0_9STRA (Reverse transcriptase domain-containing protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0JSB0_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 4.740e-15
Identity = 47/127 (37.01%), Postives = 67/127 (52.76%), Query Frame = 0
Query:   14 GRPEGYVAKLEEIVLGECFDGFRRALTGEPPARVAPMRVKLKQGADLTQVKAKPRVYPPEKSVWLKEHFELLCETGMVYPNPQAVCASVTMAFPKGSGKGYRLVADFSPINGQCELMPGPMLNPDIE 140
            G P  Y+ +L  I     FD +R  L  +PPARV PMR++LK   +    K K R YPPE   +++E  + L E G +Y NP +  A   +   K    GYR  AD+ P+N Q + + G M NP ++
Sbjct:  134 GFPAEYLGELHRIATR--FDLWRAQLDRDPPARVPPMRIRLKP--ETKPYKCKARKYPPEVRHFMEEFNQKLEELGWIYENPNSRWACPALPVRKSGSDGYRQTADYKPVNIQVDGIAGVMPNPQVD 256          
BLAST of mRNA_H-elongata_contig75843.15270.1 vs. uniprot
Match: A0A6G0MKE3_9STRA (Uncharacterized protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0MKE3_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 4.860e-15
Identity = 47/127 (37.01%), Postives = 67/127 (52.76%), Query Frame = 0
Query:   14 GRPEGYVAKLEEIVLGECFDGFRRALTGEPPARVAPMRVKLKQGADLTQVKAKPRVYPPEKSVWLKEHFELLCETGMVYPNPQAVCASVTMAFPKGSGKGYRLVADFSPINGQCELMPGPMLNPDIE 140
            G P  Y+ +L  I     FD +R  L  +PPARV PMR++LK   +    K K R YPPE   +++E  + L E G +Y NP +  A   +   K    GYR  AD+ P+N Q + + G M NP ++
Sbjct:  134 GFPAEYLGELHRIATR--FDLWRAQLDRDPPARVPPMRIRLKP--ETKPYKCKARKYPPEVRHFMEEFNQKLEELGWIYENPNSRWACPALPVRKSGSDGYRQTADYKPVNIQVDGIAGVMPNPQVD 256          
BLAST of mRNA_H-elongata_contig75843.15270.1 vs. uniprot
Match: A0A6G0WP68_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WP68_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 6.560e-15
Identity = 52/136 (38.24%), Postives = 70/136 (51.47%), Query Frame = 0
Query:    1 EALVSALRAAVETGRPEGYVAKLEEIVLGECFDGFRRALTGEPPARVAPMRVKLKQGADLTQVKAKPRVYPPEKSVWLKEHFELLCETGMVYPNPQAVCASVTMAFPKGSGKGYRLVADFSPINGQCELMPGPMLN 136
            E L   +  AVE G P G V +L  I L    D FR     +PP +VAP++V+LK+GA    VK   R YPP    +L++H   L   G++Y N +A  A+     PK +   YR+  +  PIN   E MP PM N
Sbjct:  543 EVLEQKVAEAVEQGLPPGQVDELRRI-LRAYQDVFRLDFGKDPPVKVAPLKVRLKEGA--VPVKVGLRRYPPAHMDYLRQHVAELEAAGLIYRNNRATWAAAPRIVPKKNPGEYRMTIESRPINAWTETMPWPMPN 675          
BLAST of mRNA_H-elongata_contig75843.15270.1 vs. uniprot
Match: H3H5L7_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H5L7_PHYRM)

HSP 1 Score: 78.6 bits (192), Expect = 3.150e-14
Identity = 54/143 (37.76%), Postives = 73/143 (51.05%), Query Frame = 0
Query:    2 ALVSALRAAVETGRPEGYVAK----LEEIVLGECFDGFRRALTGEPPARVAPMRVKLKQGADLTQVKAKPRVYPPEKSVWLKEHFELLCETGMVYPNPQAVCASVTMAFPKGSGKGYRLVADFSPINGQCELMPGPMLNPDIE 140
            A+  AL   ++  R  G  +K    L+E++     D FR +   +PP RV P+RV LK+GA    VKAK R YPP+   +L+EH E L   G+V  N ++  AS      K     YR+  D   +N   E MP PM  PDIE
Sbjct:  613 AVQEALELKIQEARANGLTSKEGDDLQELLFRH-IDVFRLSFGDDPPVRVPPLRVHLKEGA--RPVKAKARRYPPDHKRYLEEHIEELVRHGLVKKNHRSRWASAPRIVAKRKPGEYRMTVDTRAVNALTEPMPWPM--PDIE 750          
BLAST of mRNA_H-elongata_contig75843.15270.1 vs. uniprot
Match: A0A2P4Y985_9STRA (Retroelement n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y985_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.050e-13
Identity = 47/141 (33.33%), Postives = 72/141 (51.06%), Query Frame = 0
Query:    2 ALVSALRAAVETGRPEGYVAKLEEIVLGECFDGFRRALTGEPPARVAPMRVKLKQGADLTQVKAKPRVYPPEKSVWLKEHFELLCETGMVYPNPQAVCASVTMAFPKGSGKGYRLVADFSPINGQCELMPG--PMLNPDIE 140
            A+ + ++ A++ G P G + +L  IV    +D +R  L  +PPA+V PMR+++K G      +AK R Y PE   +L+   + L   G VY NP    A   +   K  G  +R   D+ P N Q E + G  P L+ D+E
Sbjct:  343 AVEAMIQLALDEGFPAGKIERLRTIVY--AYDVWRLTLGSDPPAKVEPMRIRMKAGCK--PFRAKARKYAPEYQAFLESFNDKLVSLGWVYENPSRRRACAALLVRKSGGSDFRQTVDYKPSNSQTEPIAGIMPNLHVDLE 479          
BLAST of mRNA_H-elongata_contig75843.15270.1 vs. uniprot
Match: A0A6G0M9I6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0M9I6_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 1.560e-13
Identity = 47/130 (36.15%), Postives = 69/130 (53.08%), Query Frame = 0
Query:    7 LRAAVETGRPEGYVAKLEEIVLGECFDGFRRALTGEPPARVAPMRVKLKQGADLTQVKAKPRVYPPEKSVWLKEHFELLCETGMVYPNPQAVCASVTMAFPKGSGKGYRLVADFSPINGQCELMPGPMLN 136
            + +AV+ G P+  V +L  I     +D +R  L  +PPARV PM+++LK GA     + KPR YPPE   +L +    L   G VY N ++  A   +   K  G+ +R  AD+ P+NG  E + G M N
Sbjct:   52 IESAVQKGFPKESVPRLRRIATR--YDIWRLRLGDDPPARVPPMKIRLKPGAK--PYRCKPRKYPPEVRRFLDDFNAELVRLGWVYENTESRWACPALPVRKTGGE-FRQTADYKPVNGDMEAIVGVMPN 176          
BLAST of mRNA_H-elongata_contig75843.15270.1 vs. uniprot
Match: A0A6G0Q2T5_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0Q2T5_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 3.260e-13
Identity = 49/136 (36.03%), Postives = 72/136 (52.94%), Query Frame = 0
Query:    7 LRAAVETGRPEGYVAKLEEIVLGECFDGFRRALTGEPPARVAPMRVKLKQGADLTQVKAKPRVYPPEKSVWLKEHFELLCETGMVYPNPQAVCASVTMAFPKGSGKGYRLVADFSPINGQCELMPG--PMLNPDIE 140
            + +AV+ G P+  V +L  I     +D +R  L  +PPARV PM+++LK GA     + KPR YPPE   +L +    L   G VY N ++  A   +   K  G+ +R  AD+ P+NG  E + G  P L  D+E
Sbjct:  133 IESAVQKGFPKESVPRLRRIATR--YDIWRLRLGDDPPARVPPMKIRLKPGAK--PYRCKPRKYPPEVRRFLDDFNAELVRLGWVYENTESRWACPALPVRKTGGE-FRQTADYKPVNGDMEAIVGVMPNLQTDLE 263          
BLAST of mRNA_H-elongata_contig75843.15270.1 vs. uniprot
Match: A0A6A3IIE0_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3IIE0_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 5.550e-13
Identity = 50/133 (37.59%), Postives = 71/133 (53.38%), Query Frame = 0
Query:   10 AVETGRPEGYVAKLEEIVLGECFDGFRRALTGEPPARVAPMRVKLKQGADLTQVKAKPRVYPPEKSVWLKEHFELLCETGMVYPNPQAVCASVTMAFPKGSGKGYRLVADFSPINGQCELMPG--PMLNPDIE 140
            A+  G P  Y  +L  I L   FD FR  L  +PPA+V P+R++LK GA   + KA  R YPPE   ++++    L E G VY N ++  A   +   KG G+ +R  AD+ P+N   E + G  P L  D+E
Sbjct:  107 AIADGFPREYKKELTRIALR--FDLFRSRLGADPPAKVPPVRIRLKPGAKPYRCKA--RKYPPEVRRFMEDFNAKLVELGWVYENRESRWACPALPVRKGGGE-FRQTADYKPMNTLVEAIVGIMPDLQTDLE 234          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig75843.15270.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A4BX04_9STRA3.730e-1638.58Reverse transcriptase domain-containing protein n=... [more]
A0A6G0WYM7_9STRA1.930e-1538.97Uncharacterized protein n=2 Tax=Aphanomyces euteic... [more]
A0A6G0JSB0_9STRA4.740e-1537.01Reverse transcriptase domain-containing protein n=... [more]
A0A6G0MKE3_9STRA4.860e-1537.01Uncharacterized protein n=3 Tax=Phytophthora fraga... [more]
A0A6G0WP68_9STRA6.560e-1538.24Reverse transcriptase domain-containing protein n=... [more]
H3H5L7_PHYRM3.150e-1437.76Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A2P4Y985_9STRA1.050e-1333.33Retroelement n=1 Tax=Phytophthora palmivora var. p... [more]
A0A6G0M9I6_9STRA1.560e-1336.15Uncharacterized protein n=1 Tax=Phytophthora fraga... [more]
A0A6G0Q2T5_9STRA3.260e-1336.03Uncharacterized protein n=2 Tax=Phytophthora fraga... [more]
A0A6A3IIE0_9STRA5.550e-1337.59Uncharacterized protein n=1 Tax=Phytophthora rubi ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 49..136

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig75843contigH-elongata_contig75843:626..1045 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig75843.15270.1mRNA_H-elongata_contig75843.15270.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig75843 626..1045 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig75843.15270.1 ID=prot_H-elongata_contig75843.15270.1|Name=mRNA_H-elongata_contig75843.15270.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=140bp
EALVSALRAAVETGRPEGYVAKLEEIVLGECFDGFRRALTGEPPARVAPM
RVKLKQGADLTQVKAKPRVYPPEKSVWLKEHFELLCETGMVYPNPQAVCA
SVTMAFPKGSGKGYRLVADFSPINGQCELMPGPMLNPDIE
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