prot_H-elongata_contig11981.1526.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11981.1526.1
Unique Nameprot_H-elongata_contig11981.1526.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length344
Homology
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BLAST of mRNA_H-elongata_contig11981.1526.1 vs. uniprot
Match: A0A6H5KH57_9PHAE (Kinesin motor domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KH57_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 1.500e-25
Identity = 67/129 (51.94%), Postives = 97/129 (75.19%), Query Frame = 0 
Query:   28 GKTTEKQLRHRLEIQVAETENLRQELLASRDRCEKVEAAFRLSEKHSREGAGEKTKELLSEMENLCQEKMLAENRVSDMQSEVERLQVIVASSAKLAAKEQHAIIAASKQHIKTLEQAVAAKDARITRI 156
            GK TE+QLRHRL  QVAE ENLRQEL+ +R+R ++ EAA R S++ +RE A EKTK LL+EMENLCQEK++AEN+  +M++E+ RL+  VA++ + AAK+Q  +I A+++ +  L+QA   KD  I ++
Sbjct: 2264 GKATEQQLRHRLTSQVAEAENLRQELMDTRERSDRAEAAVRASDQRARESADEKTKGLLAEMENLCQEKLIAENKAGEMEAELSRLREAVATAEQTAAKDQGMLIRAAEERMAVLDQAAQDKDIAIAKL 2392
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11981.1526.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KH57_9PHAE1.500e-2551.94Kinesin motor domain-containing protein n=2 Tax=Ec... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 6..16
NoneNo IPR availableCOILSCoilCoilcoord: 82..109
NoneNo IPR availableCOILSCoilCoilcoord: 176..203
NoneNo IPR availableCOILSCoilCoilcoord: 32..66
NoneNo IPR availableCOILSCoilCoilcoord: 28..29
NoneNo IPR availableCOILSCoilCoilcoord: 299..319

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11981contigH-elongata_contig11981:3801..7516 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11981.1526.1mRNA_H-elongata_contig11981.1526.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11981 2771..7568 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11981.1526.1 ID=prot_H-elongata_contig11981.1526.1|Name=mRNA_H-elongata_contig11981.1526.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=344bp
MLVVLKTALEESHKELXXXXXXXXXXXGKTTEKQLRHRLEIQVAETENLR
QELLASRDRCEKVEAAFRLSEKHSREGAGEKTKELLSEMENLCQEKMLAE
NRVSDMQSEVERLQVIVASSAKLAAKEQHAIIAASKQHIKTLEQAVAAKD
ARITRIKGVRLTKHEVEKLSATKLNARKTAAENKELSAANRELRQRLTSM
HRRGRGRRSAEPSPAEASAQAAALAIASERVEKLQGVKSSLMERCQQYGK
RIYELERRQMRVRATVEKAGVAAPEGCDLSDAVLEVAEQAAGAEDASENT
NVKAEADKFRAELQTLKSKLASSQPTKAPESAKRVCRQDQRPR*
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