mRNA_H-elongata_contig75744.15265.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig75744.15265.1
Unique NamemRNA_H-elongata_contig75744.15265.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig75744.15265.1 vs. uniprot
Match: D7G5E6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5E6_ECTSI)

HSP 1 Score: 204 bits (520), Expect = 3.070e-58
Identity = 103/174 (59.20%), Postives = 134/174 (77.01%), Query Frame = 1
Query:   34 RDEVTQALNILLALKRWIRVQVPTIEDGNNFGVSVQRDVDGAIEKLTESIEKALHKIPGYFQDRAVAWEKTATKILKEAKTSTSTTKETGGKDGDVNKSVSSSSTDETSSQASAAPDSSLHLVAIDVSWFVRLHHMALEARDALIISGDMVEKNIEKLRKPKGSNNRGGTMYSF 555
            R+EVTQ ++ILLALKRWIRVQVP IEDGNNFGVSVQ DV   I++LT  +  +L ++PGYF+ RA AW+K   K  KE+KTS+S +K+TGGKDGD         T+E +S++S APDS+ HL+A+DV WFV LHH  L ARD+L+++ DM+EKN+EKL +PKG+N +GG MYSF
Sbjct:   71 RNEVTQTMSILLALKRWIRVQVPKIEDGNNFGVSVQLDVAKGIDELTTPVASSLGEMPGYFESRASAWDKIGNKKSKESKTSSSASKDTGGKDGDSXXXXXXXXTEEKTSESSFAPDSANHLIALDVKWFVSLHHTLLRARDSLVLAADMIEKNMEKLLRPKGTNTQGGGMYSF 244          
BLAST of mRNA_H-elongata_contig75744.15265.1 vs. uniprot
Match: A0A835YYY9_9STRA (Proteasome activator pa28 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYY9_9STRA)

HSP 1 Score: 139 bits (351), Expect = 4.690e-34
Identity = 79/169 (46.75%), Postives = 105/169 (62.13%), Query Frame = 1
Query:   34 RDEVTQALNILLALKRWIRVQVPTIEDGNNFGVSVQRDVDGAIEKLTESIEKALHKIPGYFQDRAVAWEKTATKILKEAKTSTSTTKETGGKDGDVNKSVSSSSTDETSSQASAAPDSSLHLVAIDVSWFVRLHHMALEARDALIISGDMVEKNIEKLRKPKGSNNRGG 540
            + ++  ++NILLAL RWI+V VP IEDGNNFGV VQ++V   I +    +E A  K+P Y + RA AWEK A K    AK STS +  TGGK+GD NK+  + S D +SS +   PD    LV +DV  +V+LH     ARD ++   DMVEKN+ K++ PKG   R G
Sbjct:   71 QSDLATSINILLALYRWIQVHVPIIEDGNNFGVGVQQEVAKLIAESVTKLEAAFDKLPEYHEKRAGAWEKLAAKEDSTAKKSTSKSTVTGGKEGDENKTTVTESNDTSSSTSRQIPDGLRALVTMDVRCYVQLHKSIQLARDTVLFCADMVEKNVTKIKAPKGDAGRHG 239          
BLAST of mRNA_H-elongata_contig75744.15265.1 vs. uniprot
Match: K3WA13_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WA13_GLOUD)

HSP 1 Score: 116 bits (290), Expect = 1.060e-25
Identity = 64/166 (38.55%), Postives = 99/166 (59.64%), Query Frame = 1
Query:   37 DEVTQALNILLALKRWIRVQVPTIEDGNNFGVSVQRDVDGAIEKLTESIEKALHKIPGYFQDRAVAWEKTATKILKEAKTSTSTTKETGGKDGDVNKSVSSSSTDETSSQASAAPDSSLHLVAIDVSWFVRLHHMALEARDALIISGDMVEKNIEKLRKPKGSNNR 534
            DE+ Q L +L  L +WI++ VP I DGNNFGV VQ+     +++   + +K    +  Y+  RA A EK   KI KE+  ST+ T  TGGKDGD NKSV++S   ET++  +   D   ++VA+D+ W+  L       RD   ++ D++EKN +K+  P+G+++R
Sbjct:   72 DEIEQVLTVLAQLSQWIQLLVPKIADGNNFGVEVQKLAYVHVKESIATWQKQWDALADYYNQRATAVEKVNDKIAKESSKSTTVTATTGGKDGDENKSVTTSLDKETATSGTVVDDWVSYIVAVDLKWYFNLARTLEAIRDQYAVTADIIEKNKDKIVLPRGNSDR 237          
BLAST of mRNA_H-elongata_contig75744.15265.1 vs. uniprot
Match: A0A2D4BJC1_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BJC1_PYTIN)

HSP 1 Score: 111 bits (277), Expect = 6.200e-24
Identity = 69/184 (37.50%), Postives = 100/184 (54.35%), Query Frame = 1
Query:    1 LFPT-TSMVRPRRDEVTQALNILLALKRWIRVQVPTIEDGNNFGVSVQRDVDGAIEKLTESIEKALHKIPGYFQDRAVAWEKTATKILKEAKTSTSTTKETGGKDGDVNKSVSSSSTDETSSQASAAPDSSLHLVAIDVSWFVRLHHMALEARDALIISGDMVEKNIEKLRKPKGSNNRGGTMY 549
            L PT T +V    D V QAL    AL +WI + +P + DGNNFGV VQ  V   +++ ++ ++KA   +P Y   RA   EK    + KE  T+ + T  TG K+GD  K+V ++   ET++      D   ++VAIDV W+  L  +    RDA  I+ D +EKN +K+ KP+G    G  MY
Sbjct:   61 LQPTLTQLVGVTSDHVEQALRXFQALXQWISLLLPKVADGNNFGVEVQLVVMKELKETSDKLQKAWDALPDYHSQRATVLEKLNEXLSKETSTTNTVTATTGXKEGDEKKTVVATVGKETATAQPVVEDWIANVVAIDVKWYFHLARVLELVRDAYAIAFDRIEKNKDKILKPRGQERSGYGMY 244          
BLAST of mRNA_H-elongata_contig75744.15265.1 vs. uniprot
Match: A0A8K1CBJ1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CBJ1_PYTOL)

HSP 1 Score: 110 bits (274), Expect = 1.530e-23
Identity = 70/166 (42.17%), Postives = 91/166 (54.82%), Query Frame = 1
Query:   52 ALNILLALKRWIRVQVPTIEDGNNFGVSVQRDVDGAIEKLTESIEKALHKIPGYFQDRAVAWEKTATKILKEAKTSTSTTKETGGKDGDVNKSVSSSSTDETSSQASAAPDSSLHLVAIDVSWFVRLHHMALEARDALIISGDMVEKNIEKLRKPKGSNNRGGTMY 549
            AL+    L +WI + VP + DGNNFGV VQ  V   I+  T+ ++KA   +P Y   RA A EK   K  KE   +T+ T+ TGGK+GD  KSV SS   E+S+ A+   D    +VAIDV WF  L       RDA  I  D VEKN +K+ +P+     G  MY
Sbjct:   78 ALSDFQKLSQWISLLVPKVADGNNFGVEVQLIVLKEIKDATDKLQKAWDSLPDYHSQRATAIEKLNDKRSKEKTVTTTVTESTGGKEGDEKKSVVSSVDKESSTSAAPVDDWIAQVVAIDVKWFYNLARTLEIVRDAYAIVYDRVEKNKDKILRPRNQERAGYGMY 243          
BLAST of mRNA_H-elongata_contig75744.15265.1 vs. uniprot
Match: A0A662Y6D6_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y6D6_9STRA)

HSP 1 Score: 103 bits (257), Expect = 2.920e-21
Identity = 64/180 (35.56%), Postives = 96/180 (53.33%), Query Frame = 1
Query:    1 LFPTTSMVRPRRDEVTQALNILLALKRWIRVQVPTIEDGNNFGVSVQRDVDGAIEKLTESIEKALHKIPGYFQDRAVAWEKTATKILKEAKTSTSTTKETGGKDGDVNKSVSSSSTDETSSQASAAPDSSLHLVAIDVSWFVRLHHMALEARDALIISGDMVEKNIEKLRKPKGSNNRGG 540
            L  TTS      D+V   ++ L  L+ WI++QVP +EDGNNFGV VQ+     +++  E  +KA   +  Y   RA A EK   K+  E+         TGGKDGD  KSV++    + S+ A A  D+   +V +DV W+  L       RD   ++ D++ KN +K+  P+G+N+R G
Sbjct:   66 LLATTS------DQVALVMDALQLLQLWIQLQVPKVEDGNNFGVEVQKYAFTQLKEALEKWQKAWDALADYSSSRATAAEKLNAKLSSESXXXXXXXXXTGGKDGDEQKSVTAKVDKQGSTGAQAGEDALAAVVELDVKWYFNLVRALEGVRDQYAVTADVIAKNKDKISLPRGNNDRAG 239          
BLAST of mRNA_H-elongata_contig75744.15265.1 vs. uniprot
Match: D0MSD0_PHYIT (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=D0MSD0_PHYIT)

HSP 1 Score: 99.0 bits (245), Expect = 1.160e-19
Identity = 59/168 (35.12%), Postives = 88/168 (52.38%), Query Frame = 1
Query:   37 DEVTQALNILLALKRWIRVQVPTIEDGNNFGVSVQRDVDGAIEKLTESIEKALHKIPGYFQDRAVAWEKTATKILKEAKTSTSTTKETGGKDGDVNKSVSSSSTDETSSQASAAPDSSLHLVAIDVSWFVRLHHMALEARDALIISGDMVEKNIEKLRKPKGSNNRGG 540
            DEV Q ++ +  L+ WI+VQVP +EDGNNFGV VQ+     +++  E  +K    +  Y   RA A EK   K   E           GGKDGD  KSV++    ++++   A  D+   +V ID+ W+  L       RD   ++ D++ KN EK+  P+G N+R G
Sbjct:   72 DEVAQLISTIQQLQVWIQVQVPKVEDGNNFGVEVQKYAFVHLKEALERWQKTWDSMADYSSARATAVEKLNAKASSETSXXXXXXSSKGGKDGDEEKSVTAKVEKQSNAGTKAPEDAIAAVVEIDIKWYFNLARALEGVRDQYAVTEDVIFKNKEKIELPRGKNDRAG 239          
BLAST of mRNA_H-elongata_contig75744.15265.1 vs. uniprot
Match: A0A484E4B7_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E4B7_BRELC)

HSP 1 Score: 99.0 bits (245), Expect = 1.160e-19
Identity = 61/168 (36.31%), Postives = 88/168 (52.38%), Query Frame = 1
Query:   37 DEVTQALNILLALKRWIRVQVPTIEDGNNFGVSVQRDVDGAIEKLTESIEKALHKIPGYFQDRAVAWEKTATKILKEAKTSTSTTKETGGKDGDVNKSVSSSSTDETSSQASAAPDSSLHLVAIDVSWFVRLHHMALEARDALIISGDMVEKNIEKLRKPKGSNNRGG 540
            DEV Q L+    L+ WI++QVP +EDGNNFGV VQ+     +++     +K    +  Y   RA A EK  TK   E+ T        GGKDGD  KSV+++   E  +   AA D+   +V +DV W+  L       RD   ++ D++ KN  K+  P+G N+R G
Sbjct:   72 DEVLQLLHTTQQLQLWIQLQVPKVEDGNNFGVEVQKYAFMHLKEAQVMWQKTWDSLAEYSAARATAVEKCHTKATSESSTXXXXXXSKGGKDGDEEKSVTATVEKECKAGTKAAEDAIAAVVELDVKWYFNLLRALEGVRDQYAVTEDVIVKNQSKIELPRGKNDRAG 239          
BLAST of mRNA_H-elongata_contig75744.15265.1 vs. uniprot
Match: A0A225WBW4_9STRA (Proteasome activator subunit 1 n=3 Tax=Phytophthora TaxID=4783 RepID=A0A225WBW4_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 3.960e-19
Identity = 57/168 (33.93%), Postives = 87/168 (51.79%), Query Frame = 1
Query:   37 DEVTQALNILLALKRWIRVQVPTIEDGNNFGVSVQRDVDGAIEKLTESIEKALHKIPGYFQDRAVAWEKTATKILKEAKTSTSTTKETGGKDGDVNKSVSSSSTDETSSQASAAPDSSLHLVAIDVSWFVRLHHMALEARDALIISGDMVEKNIEKLRKPKGSNNRGG 540
            DEV Q ++ L  L+ WI++QVP +EDGNNFGV VQ+     +++  E  +K    +  Y   RA   EK   K   E           GGKDGD  KSV++    ++++   A  D+   +V +D+ W+  L       RD   ++ D++ KN EK+  P+G N+R G
Sbjct:   72 DEVAQLMSALQLLQLWIQLQVPKVEDGNNFGVEVQKYAYVHLKEALEKWQKTWDSVADYSSARATTVEKLNAKASSETSXXXXXXXSKGGKDGDEEKSVTAKVEKQSNTGNQAPEDAVAAVVELDIKWYFNLARALEGVRDQYAVTEDIITKNKEKIELPRGKNDRAG 239          
BLAST of mRNA_H-elongata_contig75744.15265.1 vs. uniprot
Match: A0A6A3F8F5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3F8F5_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 1.830e-18
Identity = 56/168 (33.33%), Postives = 89/168 (52.98%), Query Frame = 1
Query:   37 DEVTQALNILLALKRWIRVQVPTIEDGNNFGVSVQRDVDGAIEKLTESIEKALHKIPGYFQDRAVAWEKTATKILKEAKTSTSTTKETGGKDGDVNKSVSSSSTDETSSQASAAPDSSLHLVAIDVSWFVRLHHMALEARDALIISGDMVEKNIEKLRKPKGSNNRGG 540
            DEV Q L+++  L+ WI++QVP +EDGNNFGV VQ+     +++  +  +K    +  Y   RA A EK   K   E              DGD  KSV++    ++++ ++AA D+   +V +DV W+  L       RD   ++ D++ KN EK+  P+G N+R G
Sbjct:   72 DEVAQLLSVIAQLQLWIQLQVPKVEDGNNFGVEVQKYAFVQLKEALDKWQKTWDSLADYSSARASAVEKLNAKASSETXXXXXXXXXXXXXDGDEEKSVTAKVDKQSNNGSNAAEDAVAAVVELDVKWYFNLVRALEGVRDQYAVTSDLISKNKEKIELPRGKNDRAG 239          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig75744.15265.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5E6_ECTSI3.070e-5859.20Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YYY9_9STRA4.690e-3446.75Proteasome activator pa28 n=1 Tax=Tribonema minus ... [more]
K3WA13_GLOUD1.060e-2538.55Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A2D4BJC1_PYTIN6.200e-2437.50Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A8K1CBJ1_PYTOL1.530e-2342.17Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A662Y6D6_9STRA2.920e-2135.56Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
D0MSD0_PHYIT1.160e-1935.12Uncharacterized protein n=11 Tax=Phytophthora TaxI... [more]
A0A484E4B7_BRELC1.160e-1936.31Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A225WBW4_9STRA3.960e-1933.93Proteasome activator subunit 1 n=3 Tax=Phytophthor... [more]
A0A6A3F8F5_9STRA1.830e-1833.33Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig75744contigH-elongata_contig75744:315..2636 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score208.4
Seed ortholog evalue2.8e-51
Seed eggNOG ortholog2880.D7G5E6
Preferred namePSME3
KEGG rclassRC00062,RC00189,RC00676,RC01052
KEGG koko:K00276,ko:K06698
KEGG ReactionR02382,R02529,R02613,R03139,R04027,R04300,R06154,R06740
KEGG Pathwayko00260,ko00350,ko00360,ko00410,ko00950,ko00960,ko01100,ko01110,ko03050,ko04612,ko05160,map00260,map00350,map00360,map00410,map00950,map00960,map01100,map01110,map03050,map04612,map05160
GOsGO:0000502,GO:0002039,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006464,GO:0006508,GO:0006807,GO:0007346,GO:0008047,GO:0008150,GO:0008152,GO:0009893,GO:0009894,GO:0009966,GO:0009968,GO:0009987,GO:0010564,GO:0010604,GO:0010646,GO:0010648,GO:0010941,GO:0010950,GO:0010952,GO:0016504,GO:0016579,GO:0019222,GO:0019538,GO:0023051,GO:0023057,GO:0030162,GO:0030234,GO:0031323,GO:0031325,GO:0031329,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032991,GO:0036211,GO:0042176,GO:0042802,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043687,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045862,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051336,GO:0051345,GO:0051726,GO:0052547,GO:0052548,GO:0060255,GO:0060548,GO:0061133,GO:0061134,GO:0061135,GO:0061136,GO:0065007,GO:0065009,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0080090,GO:0097371,GO:0098772,GO:1901564,GO:1901987,GO:1901990,GO:1902494,GO:1902806,GO:1903050,GO:1903362,GO:1905368,GO:1905369,GO:2000045,GO:2001233,GO:2001234,GO:2001236,GO:2001237
EggNOG free text desc.endopeptidase activator activity
EggNOG OGsKOG4470@1,KOG4470@2759
EC1.4.3.21
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03051,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionProteasome activator pa28, C-terminal domain
Ec32 orthologEc-06_010760.1
Exons2
Model size1813
Cds size540
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig75744.15265.1prot_H-elongata_contig75744.15265.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig75744 333..1381 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931163.2825994-UTR-H-elongata_contig75744:314..3321622931163.2825994-UTR-H-elongata_contig75744:314..332Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig75744 315..332 +
1691679724.175472-UTR-H-elongata_contig75744:314..3321691679724.175472-UTR-H-elongata_contig75744:314..332Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig75744 315..332 +
1622931163.3301873-UTR-H-elongata_contig75744:1381..26361622931163.3301873-UTR-H-elongata_contig75744:1381..2636Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig75744 1382..2636 +
1691679724.2130132-UTR-H-elongata_contig75744:1381..26361691679724.2130132-UTR-H-elongata_contig75744:1381..2636Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig75744 1382..2636 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931163.2996743-CDS-H-elongata_contig75744:332..6231622931163.2996743-CDS-H-elongata_contig75744:332..623Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75744 333..623 +
1691679724.1905606-CDS-H-elongata_contig75744:332..6231691679724.1905606-CDS-H-elongata_contig75744:332..623Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75744 333..623 +
1622931163.3178601-CDS-H-elongata_contig75744:1132..13811622931163.3178601-CDS-H-elongata_contig75744:1132..1381Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75744 1133..1381 +
1691679724.200539-CDS-H-elongata_contig75744:1132..13811691679724.200539-CDS-H-elongata_contig75744:1132..1381Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75744 1133..1381 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig75744.15265.1

>prot_H-elongata_contig75744.15265.1 ID=prot_H-elongata_contig75744.15265.1|Name=mRNA_H-elongata_contig75744.15265.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=180bp
MVRPRRDEVTQALNILLALKRWIRVQVPTIEDGNNFGVSVQRDVDGAIEK
LTESIEKALHKIPGYFQDRAVAWEKTATKILKEAKTSTSTTKETGGKDGD
VNKSVSSSSTDETSSQASAAPDSSLHLVAIDVSWFVRLHHMALEARDALI
ISGDMVEKNIEKLRKPKGSNNRGGTMYSF*
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mRNA from alignment at H-elongata_contig75744:315..2636+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig75744.15265.1 ID=mRNA_H-elongata_contig75744.15265.1|Name=mRNA_H-elongata_contig75744.15265.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2322bp|location=Sequence derived from alignment at H-elongata_contig75744:315..2636+ (Himanthalia elongata Himel1 dioecious)
CTTTTTCCGACCACATCAATGGTCCGTCCGCGTAGAGATGAGGTCACACA GGCCCTGAATATCCTCCTAGCGCTGAAGCGATGGATTCGCGTTCAGGTGC CTACAATCGAGGACGGAAACAATTTCGGCGTTAGCGTTCAGCGCGATGTT GACGGGGCCATCGAGAAGCTCACCGAGTCCATAGAAAAGGCCCTGCATAA GATTCCTGGATACTTCCAGGATCGGGCCGTGGCCTGGGAGAAGACCGCCA CCAAGATCTTGAAGGAGGCCAAAACTTCCACCTCCACGACCAAGGAAACG GGGGGCAAGGTATGGTGGCCGTGACCGTCCCGTGTTAACATCGCGGTTCA GCAAAACAATACGTCTCCCTTTACTTCCTGAAGTAATCTTCATGTCGGGG CGAGACGGGATAGAGCGTACGATGGCGCATAAGACGTTTTACGGTCGAAA ATTAGTAAAAGCCATAGGCATCGCTCTTGTGGGGAGTTTAGTGTTTACGG CCGTGGCGCGATCCAATCACACACTTCTTGTTCTTCCCTCGGGCATCTCT TGTGTATCTAGTAGTCTGCCTGTACGGTGGGGATGAAACGCTCGGCTCTC GTCGACTAATTGTTTGCAGACAGGTCCTACGACAGTGCCACTTGCGGGAG AGGTGATCCCGATGCTTAAATGTTAGTTAGAGGGATGTTGAAAGCCTTAG CATTGATAGTCCAACGGGCTGAAGATATCGCGTCTATAATGGCAGCTATC TGGTACCAGTTTAAACCATTTTCCCTGCCGCGTGATTTGATTGGCCTCCC GATGGTCGCCGTGCACAGGACGGGGACGTCAACAAGAGTGTTTCATCTTC TAGCACAGATGAAACCTCGTCCCAGGCGTCGGCTGCGCCGGACTCGTCCC TTCATCTTGTCGCCATCGACGTATCGTGGTTCGTGCGTCTGCACCACATG GCACTAGAGGCTAGGGACGCCCTGATCATATCAGGGGATATGGTCGAGAA AAACATTGAGAAGCTGCGGAAGCCCAAAGGCTCGAATAATCGGGGAGGCA CGATGTATTCCTTCTAACTTTAGCACTTAAAGTGTCTTATCAGTAGTAAG CAAGTACTCTTTTCACGGGAAGAATATTGTAGATGCTTCGTCTCTGTCGC TCGGATGTGTGAGTAAAACAGACCCGAAAAATCTAGCGATCCCATGAAGC TGTGGTGACTCCGAATATTTTGGTCGTGCGTTAGATATTGGGCTAGATAT TTTTTAGAGATCGGAATGTGAAAGCGGTTCCCGCTGTTTTTTTAGTGACA TTCTTTCGCTGCACATTTTTTTAATTTTTTAATTTGACTCATTCGAACCC TCCGAACATCCACCCATTCTTAGCGCCGAGAGAGGTGTAGTCCAGGGGAC CAACTATCGTCAGGTTCAAAGTACATTACTACCTTTGAGCACAAAATCGT CACACTTGATTAATCCTGTTCCCCCAAAGTGTCGTGTCGACGTCTAGAGA GCATCTCATCTCACGTTAATTTTGACATGAAGGATAGCTTGTTGCACGTT GTTGCGATTGAATGGGGACAAGCCTTCAAGTGCGGGAATCATCATTTTGA GGGTTTCGAACAACGTCCGTGTGAGAGTTTCTGGCGTGCCCCGTAAGGGG GGGGTGAAGGGGGAGGGAGCGCGTGAACGTTAATTTTGCATATGGGATTT CTCTCCGACTTCGTCTCAGTAGGAATTTTTAGTTTTTTTTTCATGAAAGA GGCTTCAACTTCAACTGCAGCAAATTTTAAGGCGGCGCGGCGAGTTGCTT GATTATTTTCCGCGTTTTTGTGAAAGGGATTCATAACTCTACCGGGCTAA TCAAGCTACGGAAGGAAGCTGTCATGTTTTACGATACCACAAACGAAATG GAAATCATTCCATGGAATTGGGATCGCGTCCCGCGAAGTTGGCGGCGGGA TGTACATGTCCCGTCAGTTTGACATCATATCTGAATGGGAGATGTTGGGG TTTTCAGACAGGGCGCGCCACAAATGGAGCTCTCGGTCCATCGTTCGAGG CGGACCGTGGCAGCAGGTGTTGTGCTTTGTGTACACTACTAGGGCTGAAG GTTCACTTGAGCAACGCTATTGTCCCATATTCTGACTAGACCTGTGAAAT GTTTCAAGGCTCGAAGGTGCGTCCCACAGCCTGTAACATGACGTGTACGT CAATGGAACTTTCATTTACCGCCGTGCCCTTTTGCCTTGGACATGCAGCA TGGGTCGTCTAGACCGATAAAATGCAGTGGCTTCACCTCGAATAATCCTA CCAAGAAATGGGTCTATCTACC
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Coding sequence (CDS) from alignment at H-elongata_contig75744:315..2636+

>mRNA_H-elongata_contig75744.15265.1 ID=mRNA_H-elongata_contig75744.15265.1|Name=mRNA_H-elongata_contig75744.15265.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1080bp|location=Sequence derived from alignment at H-elongata_contig75744:315..2636+ (Himanthalia elongata Himel1 dioecious)
ATGGTCCGTCCGCGTAGAGATGAGGTCACACAGGCCCTGAATATCCTCCT
AGCGCTGAAGCGATGGATTCGCGTTCAGGTGCCTACAATCGAGGACGGAA
ACAATTTCGGCGTTAGCGTTCAGCGCGATGTTGACGGGGCCATCGAGAAG
CTCACCGAGTCCATAGAAAAGGCCCTGCATAAGATTCCTGGATACTTCCA
GGATCGGGCCGTGGCCTGGGAGAAGACCGCCACCAAGATCTTGAAGGAGG
CCAAAACTTCCACCTCCACGACCAAGGAAACGGGGGGCAAGATGGTCCGT
CCGCGTAGAGATGAGGTCACACAGGCCCTGAATATCCTCCTAGCGCTGAA
GCGATGGATTCGCGTTCAGGTGCCTACAATCGAGGACGGAAACAATTTCG
GCGTTAGCGTTCAGCGCGATGTTGACGGGGCCATCGAGAAGCTCACCGAG
TCCATAGAAAAGGCCCTGCATAAGATTCCTGGATACTTCCAGGATCGGGC
CGTGGCCTGGGAGAAGACCGCCACCAAGATCTTGAAGGAGGCCAAAACTT
CCACCTCCACGACCAAGGAAACGGGGGGCAAGGACGGGGACGTCAACAAG
AGTGTTTCATCTTCTAGCACAGATGAAACCTCGTCCCAGGCGTCGGCTGC
GCCGGACTCGTCCCTTCATCTTGTCGCCATCGACGTATCGTGGTTCGTGC
GTCTGCACCACATGGCACTAGAGGCTAGGGACGCCCTGATCATATCAGGG
GATATGGTCGAGAAAAACATTGAGAAGCTGCGGAAGCCCAAAGGCTCGAA
TAATCGGGGAGGCACGATGTATTCCTTCTAAGACGGGGACGTCAACAAGA
GTGTTTCATCTTCTAGCACAGATGAAACCTCGTCCCAGGCGTCGGCTGCG
CCGGACTCGTCCCTTCATCTTGTCGCCATCGACGTATCGTGGTTCGTGCG
TCTGCACCACATGGCACTAGAGGCTAGGGACGCCCTGATCATATCAGGGG
ATATGGTCGAGAAAAACATTGAGAAGCTGCGGAAGCCCAAAGGCTCGAAT
AATCGGGGAGGCACGATGTATTCCTTCTAA
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