prot_H-elongata_contig7568.15258.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig7568.15258.1
Unique Name	prot_H-elongata_contig7568.15258.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	107

Homology

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BLAST of mRNA_H-elongata_contig7568.15258.1 vs. uniprot
Match: A0A6H5KAN7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN7_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 8.210e-36
Identity = 68/107 (63.55%), Postives = 83/107 (77.57%), Query Frame = 0

Query:    1 MKKLAACVGKFSHSAVKNSELKTIQELSPVFSKVYELIRRNDTRWTTQRNMMERLLQLKEPVVEYFRRNSNDKRRLTSHDWNVTNQVCSILDPIADVNIKIQGAEDT 107
            MK+LAA VG FSHSAV N ELK IQ L   F  +YELIRRNDTRW +Q  MM RLL+LK+ +VEYFR N N+ R+L+S +W VTN+VCS+LD +A+V +KIQGA DT
Sbjct:   78 MKRLAAVVGVFSHSAVNNDELKDIQRLQEEFQIIYELIRRNDTRWASQHAMMVRLLKLKKAIVEYFRDNENNNRKLSSREWTVTNEVCSLLDVVAEVTVKIQGATDT 184

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BLAST of mRNA_H-elongata_contig7568.15258.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 3.830e-35
Identity = 68/107 (63.55%), Postives = 83/107 (77.57%), Query Frame = 0

Query:    1 MKKLAACVGKFSHSAVKNSELKTIQELSPVFSKVYELIRRNDTRWTTQRNMMERLLQLKEPVVEYFRRNSNDKRRLTSHDWNVTNQVCSILDPIADVNIKIQGAEDT 107
            MK+LAA VG FSHSAV N ELK IQ L   F  +YELIRRNDTRW +Q  MM RLL+LK+ +VEYFR N N+ R+L+S +W VTN+VCS+LD +A+V +KIQGA DT
Sbjct:  406 MKRLAAVVGVFSHSAVNNDELKDIQRLQEEFQIIYELIRRNDTRWASQHAMMVRLLKLKKAIVEYFRDNENNNRKLSSREWTVTNEVCSLLDVVAEVTVKIQGATDT 512

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BLAST of mRNA_H-elongata_contig7568.15258.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE)

HSP 1 Score: 129 bits (324), Expect = 1.420e-32
Identity = 60/107 (56.07%), Postives = 85/107 (79.44%), Query Frame = 0

Query:    1 MKKLAACVGKFSHSAVKNSELKTIQELSPVFSKVYELIRRNDTRWTTQRNMMERLLQLKEPVVEYFRRNSNDKRRLTSHDWNVTNQVCSILDPIADVNIKIQGAEDT 107
            MKKLAA VG FSHSAV N ELK +Q L   FS++YEL+RRNDTRWT+Q  MM+R+L LK+P+ EYF++   ++R+LT ++W +TN+VCS+L  +++V I++QG+ DT
Sbjct:  416 MKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRRNDTRWTSQFKMMDRVLALKKPISEYFKKYPQNERKLTPNEWTITNEVCSLLSDVSEVTIRMQGSVDT 522

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BLAST of mRNA_H-elongata_contig7568.15258.1 vs. uniprot
Match: A0A6H5KZZ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZZ1_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 2.410e-32
Identity = 58/107 (54.21%), Postives = 83/107 (77.57%), Query Frame = 0

Query:    1 MKKLAACVGKFSHSAVKNSELKTIQELSPVFSKVYELIRRNDTRWTTQRNMMERLLQLKEPVVEYFRRNSNDKRRLTSHDWNVTNQVCSILDPIADVNIKIQGAEDT 107
            MKKLAA VG F+HSAV N ELK +Q L   FS++YEL+RRNDTRWT+Q  MM+R L LK+P+ EYF++   ++R+LT ++W + N+VCS+L  +++V I++QG+ DT
Sbjct:    5 MKKLAAMVGVFNHSAVNNDELKELQRLEEGFSRIYELLRRNDTRWTSQFKMMDRCLALKKPISEYFKKYLQNERKLTPNEWTMINEVCSLLSNVSEVTIRMQGSVDT 111

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BLAST of mRNA_H-elongata_contig7568.15258.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 9.160e-32
Identity = 61/107 (57.01%), Postives = 81/107 (75.70%), Query Frame = 0

Query:    1 MKKLAACVGKFSHSAVKNSELKTIQELSPVFSKVYELIRRNDTRWTTQRNMMERLLQLKEPVVEYFRRNSNDKRRLTSHDWNVTNQVCSILDPIADVNIKIQGAEDT 107
            MKKLAA VG FSHSAV N +LK +Q L      VY+LIRRNDTRWT+Q  MM+RLL LK+P+ EYFR   ++ R+LT  +W +TN+VCS+L  +++V I++QGA+DT
Sbjct:  414 MKKLAALVGVFSHSAVNNDKLKELQRLEEDLHAVYQLIRRNDTRWTSQFKMMDRLLALKKPITEYFREQPHNSRKLTQPEWTITNEVCSLLSDVSEVTIRMQGAKDT 520

[Close]

BLAST of mRNA_H-elongata_contig7568.15258.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 1.000e-31
Identity = 59/107 (55.14%), Postives = 84/107 (78.50%), Query Frame = 0

Query:    1 MKKLAACVGKFSHSAVKNSELKTIQELSPVFSKVYELIRRNDTRWTTQRNMMERLLQLKEPVVEYFRRNSNDKRRLTSHDWNVTNQVCSILDPIADVNIKIQGAEDT 107
            MKKLAA VG FSHSAV N ELK +Q L   FS++YEL+R NDTRWT+Q  MM+R+L LK+P+ EYF++   ++R+LT ++W +TN+VCS+L  +++V I++QG+ DT
Sbjct:  221 MKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRPNDTRWTSQFKMMDRVLALKKPISEYFKKYPQNERKLTPNEWTITNEVCSLLSDVSEVTIRMQGSVDT 327

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BLAST of mRNA_H-elongata_contig7568.15258.1 vs. uniprot
Match: A0A6H5JZU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZU3_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 1.340e-31
Identity = 65/114 (57.02%), Postives = 83/114 (72.81%), Query Frame = 0

Query:    1 MKKLAACVGKFSHSAVKNSELKTIQELSPVFSKVYELIRRNDTRWTTQRNMMERLLQLKEPVVEYFRR-------NSNDKRRLTSHDWNVTNQVCSILDPIADVNIKIQGAEDT 107
            MKKLAA VG FSHSAV N  LK +Q L     ++YE IRRNDTRWT+Q+ MM RLL LK+P+ EYFRR       N   KR+LT+H+W VTN+VCS+L+ +++V I++QGA DT
Sbjct:  223 MKKLAALVGVFSHSAVNNDMLKELQRLEADLHRIYETIRRNDTRWTSQQKMMGRLLILKKPISEYFRRLAQQNSQNKQLKRKLTAHEWTVTNEVCSLLETVSEVTIRMQGATDT 336

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BLAST of mRNA_H-elongata_contig7568.15258.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 4.810e-31
Identity = 64/114 (56.14%), Postives = 83/114 (72.81%), Query Frame = 0

Query:    1 MKKLAACVGKFSHSAVKNSELKTIQELSPVFSKVYELIRRNDTRWTTQRNMMERLLQLKEPVVEYFRR-------NSNDKRRLTSHDWNVTNQVCSILDPIADVNIKIQGAEDT 107
            MKKLAA VG FSHSAV N  LK +Q L     ++YE IRRNDTRWT+Q+ MM RLL LK+P+ EYFRR       N   KR+LT+H+W VTN+VCS+L+ +++V I++QGA +T
Sbjct:  223 MKKLAALVGVFSHSAVNNDMLKELQRLEADLHRIYETIRRNDTRWTSQQKMMGRLLILKKPISEYFRRLAQQNSQNKQLKRKLTAHEWTVTNEVCSLLETVSEVTIRMQGATET 336

[Close]

BLAST of mRNA_H-elongata_contig7568.15258.1 vs. uniprot
Match: A0A6H5KAS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS2_9PHAE)

HSP 1 Score: 119 bits (298), Expect = 1.100e-29
Identity = 57/108 (52.78%), Postives = 82/108 (75.93%), Query Frame = 0

Query:    1 MKKLAACVGKFSHSAVKNSELKTIQELSPVFSKVYELIRRNDTRW-TTQRNMMERLLQLKEPVVEYFRRNSNDKRRLTSHDWNVTNQVCSILDPIADVNIKIQGAEDT 107
            MKKLAA VG FSHSAV N ELK +Q L   FS++YEL+RRNDTRW T+Q  MM+R L LK+P+ E+F++   + R+LT ++W + N+VCS+L  ++++ I++QG+ DT
Sbjct:   65 MKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRRNDTRWWTSQLKMMDRALALKKPISEFFKKYPQNDRKLTPNEWTIINEVCSLLADVSEITIRVQGSVDT 172

[Close]

BLAST of mRNA_H-elongata_contig7568.15258.1 vs. uniprot
Match: A0A6H5KDJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ6_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 3.460e-24
Identity = 61/113 (53.98%), Postives = 80/113 (70.80%), Query Frame = 0

Query:    1 MKKLAACVGKFSHSAVKNSELKTIQELSPVFSKVYELIRRNDTRWTTQRNMMERLLQLKEPVVEYFRR------NSNDKRRLTSHDWNVTNQVCSILDPIADVNIKIQGAEDT 107
            MKKLAA VG FS SAV N+ LK +Q L     ++YEL+RRNDT   +Q  MM RLL LK+P+ EYFRR      N   KR+L+SH+W VTN+VCS+L  ++++ I+IQGA+DT
Sbjct:   82 MKKLAALVGVFSPSAV-NNMLKELQRLETDLHRIYELMRRNDT---SQFKMMGRLLTLKKPISEYFRRLPQIPSNKQLKRKLSSHEWIVTNEVCSLLGDVSEITIRIQGAQDT 190

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig7568.15258.1 vs. uniprot

BLAST of mRNA_H-elongata_contig7568.15258.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12


Match Name	E-value	Identity	Description
A0A6H5KAN7_9PHAE	8.210e-36	63.55	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5KJ52_9PHAE	3.830e-35	63.55	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5JGG8_9PHAE	1.420e-32	56.07	Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ec...	[more]
A0A6H5KZZ1_9PHAE	2.410e-32	54.21	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JRT6_9PHAE	9.160e-32	57.01	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JTB8_9PHAE	1.000e-31	55.14	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5JZU3_9PHAE	1.340e-31	57.02	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JQI6_9PHAE	4.810e-31	56.14	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KAS2_9PHAE	1.100e-29	52.78	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KDJ6_9PHAE	3.460e-24	53.98	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 37..103

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig7568	contig	H-elongata_contig7568:9447..9895 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig7568.15258.1	mRNA_H-elongata_contig7568.15258.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig7568 9447..9895 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig7568.15258.1 ID=prot_H-elongata_contig7568.15258.1|Name=mRNA_H-elongata_contig7568.15258.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=107bp
MKKLAACVGKFSHSAVKNSELKTIQELSPVFSKVYELIRRNDTRWTTQRN
MMERLLQLKEPVVEYFRRNSNDKRRLTSHDWNVTNQVCSILDPIADVNIK
IQGAEDT

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012337	RNaseH-like_sf