prot_H-elongata_contig75663.15252.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig75663.15252.1
Unique Nameprot_H-elongata_contig75663.15252.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length47
Homology
[Close]
BLAST of mRNA_H-elongata_contig75663.15252.1 vs. uniprot
Match: A0A6H5JQN5_9PHAE (Fe-ADH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN5_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 9.350e-12
Identity = 32/40 (80.00%), Postives = 37/40 (92.50%), Query Frame = 0 
Query:    1 PLLGPIPLVAIPVVAGVGSEVTPMATILDDDDPLEPTKAS 40
            PLLGP+PLVAIP+VAG+GSEVTP+ATILDD DPLEP K +
Sbjct:   62 PLLGPVPLVAIPLVAGIGSEVTPVATILDDRDPLEPVKVT 101
[Close]
BLAST of mRNA_H-elongata_contig75663.15252.1 vs. uniprot
Match: D7FRP4_ECTSI (Similar to Iron-containing Alcohol Dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRP4_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 1.280e-11
Identity = 31/40 (77.50%), Postives = 37/40 (92.50%), Query Frame = 0 
Query:    1 PLLGPIPLVAIPVVAGVGSEVTPMATILDDDDPLEPTKAS 40
            PLLGP+PLVAIP+VAG+GSEVTP+ATI+DD DPLEP K +
Sbjct:  236 PLLGPVPLVAIPLVAGIGSEVTPVATIMDDHDPLEPVKVT 275
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig75663.15252.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JQN5_9PHAE9.350e-1280.00Fe-ADH domain-containing protein n=1 Tax=Ectocarpu... [more]
D7FRP4_ECTSI1.280e-1177.50Similar to Iron-containing Alcohol Dehydrogenase n... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.1970coord: 3..46
e-value: 3.3E-6
score: 28.8
NoneNo IPR availableSUPERFAMILY56796Dehydroquinate synthase-likecoord: 4..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig75663contigH-elongata_contig75663:2703..2843 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig75663.15252.1mRNA_H-elongata_contig75663.15252.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig75663 2703..2843 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig75663.15252.1 ID=prot_H-elongata_contig75663.15252.1|Name=mRNA_H-elongata_contig75663.15252.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=47bp
PLLGPIPLVAIPVVAGVGSEVTPMATILDDDDPLEPTKASKHARKI*
back to top