prot_H-elongata_contig75661.15250.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig75661.15250.1
Unique Nameprot_H-elongata_contig75661.15250.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length205
Homology
BLAST of mRNA_H-elongata_contig75661.15250.1 vs. uniprot
Match: D7FLD9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLD9_ECTSI)

HSP 1 Score: 321 bits (822), Expect = 6.730e-108
Identity = 145/174 (83.33%), Postives = 155/174 (89.08%), Query Frame = 0
Query:   32 EWHATFIQDSKLGCNAVSWAPYNSLGSREGGAEYMRLVTGSCDNRVRIWRCAVGTTEWQEEGNVQDASPRHSDWVRDVAWAPSTGMPCNIVASCSEDRSVIIWTQSQAAGPWSAAEMKTFTAPVWRVSWSITGNVLAVSSGTSDVSLWKQNLAGTWECISTVAEH-GPVPSPQY 204
            EWH TFIQDSKLGCN+VSWAP+NSLGSREG   YMRLVTGSCDNRVR WRCAVG T W+E+G+  D+SPRHSDWVRDVAWAP+TGMPCNIVASCSEDR V+IWTQSQA+GPW+AAEMKTF APVWRVSWSITGNVLAVSSG SDVSLWKQNL G WECISTV E  GP PSP Y
Sbjct:  142 EWHTTFIQDSKLGCNSVSWAPFNSLGSREGEKVYMRLVTGSCDNRVRFWRCAVGETVWKEDGSSHDSSPRHSDWVRDVAWAPATGMPCNIVASCSEDRGVVIWTQSQASGPWAAAEMKTFPAPVWRVSWSITGNVLAVSSGDSDVSLWKQNLEGAWECISTVPEEAGPTPSPHY 315          
BLAST of mRNA_H-elongata_contig75661.15250.1 vs. uniprot
Match: W2QRD8_PHYPN (Protein transporter SEC13 n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2QRD8_PHYPN)

HSP 1 Score: 237 bits (605), Expect = 6.210e-76
Identity = 111/199 (55.78%), Postives = 138/199 (69.35%), Query Frame = 0
Query:    1 SIAWAPHELGLILACASSDGRVSILQHQPNDEWHATFIQDSKLGCNAVSWAPYNSLGSREGGAEYMRLVTGSCDNRVRIWRCAVGTTEWQEEGNVQDASPRHSDWVRDVAWAPSTGMPCNIVASCSEDRSVIIWTQSQAAGPWSAAEMKTFTAPVWRVSWSITGNVLAVSSGTSDVSLWKQNLAGTWECISTVAEHGPV 199
            SIAWAPHE GL LACAS+DG VS+L + P + W  +  +DS LGCNAVSWAP+NS+GS+       R+VT SCD  ++IW    G +EW ++     A P HSDWVRDVAWAPSTG+P N++ASCSED+ V IW+Q+     W    + TF APVWRVSWS+TGNVLAVSSG   V+LWK+ L   W  IS+V E G +
Sbjct:   46 SIAWAPHEYGLALACASADGTVSVLSYSP-EGWSVSHFKDSALGCNAVSWAPFNSVGSQGPSGPIRRVVTASCDKTIKIWSLPEGESEWTKQ--ELSAVPAHSDWVRDVAWAPSTGLPVNLIASCSEDKHVYIWSQTAEDSSWKRELLHTFDAPVWRVSWSVTGNVLAVSSGDHKVTLWKETLDKKWIQISSVDEAGAI 241          
BLAST of mRNA_H-elongata_contig75661.15250.1 vs. uniprot
Match: A0A7S0C2K8_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C2K8_9STRA)

HSP 1 Score: 229 bits (583), Expect = 5.720e-72
Identity = 114/206 (55.34%), Postives = 144/206 (69.90%), Query Frame = 0
Query:    1 SIAWAPHELGLILACASSDGRVSILQHQPNDEWHATFIQDSKLGCNAVSWAPYNSLGSREGGAEYMRLVTGSCDNRVRIWRCAVGTT----EWQEEGNVQDASPRHSDWVRDVAWAP-STGMPCNIVASCSEDRSVIIWTQSQAA----GPWSAAEMKTFTAPVWRVSWSITGNVLAVSSGTSDVSLWKQNLAGTWECISTVAEHG 197
            S+A+APHE GL+LACASSDGRVS+L HQ +D W ++ ++DS LG NAVSWAPY    S E  +  + LVTG CDNR+R W  A G +    EW EE +V   + RH+DWVRDVAWAP ST     +VASCSED +VI+WT++ +     G W  A + TF  PVWR+SWS+TG++LAVSSG   V+LWK NL GTW+ +STV E G
Sbjct:   79 SVAFAPHEHGLMLACASSDGRVSVLTHQNDDSWTSSVLRDSALGVNAVSWAPYTPTDSTEEFSS-LSLVTGGCDNRIRFWTHAQGQSAVGAEWVEETDVLGGTLRHTDWVRDVAWAPGSTTSKMTMVASCSEDGTVIVWTRTSSVESGEGKWMPALLHTFDGPVWRLSWSVTGHILAVSSGDDSVTLWKANLDGTWQEVSTVEEVG 283          
BLAST of mRNA_H-elongata_contig75661.15250.1 vs. uniprot
Match: A0A836CBZ9_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBZ9_9STRA)

HSP 1 Score: 228 bits (580), Expect = 3.800e-71
Identity = 104/190 (54.74%), Postives = 130/190 (68.42%), Query Frame = 0
Query:   23 SILQHQPNDEWHATFIQDSKLGCNAVSWAPYNSLGSREG--GAEYMRLVTGSCDNRVRIWRCAV---------GTTEWQEEGNVQDASPRHSDWVRDVAWAPSTGMPCNIVASCSEDRSVIIWTQSQAAGPWSAAEMKTFTAPVWRVSWSITGNVLAVSSGTSDVSLWKQNLAGTWECISTVAEHGPVPS 201
            SILQH  +D W  +  QD KLGCNAVSWAPY S G ++   G + MRLVTGSCDNRVR+W+C           G   W +E  +  + P H+DWVRDVAWAP+TGMP N +ASC ED++V IWTQ +    W+  +M  F+APVWR+SWS+TGNVLAVS G  DV+LWKQN+ G WE +S+V E G  P+
Sbjct:  132 SILQHMDDDSWQVSTFQDGKLGCNAVSWAPYGSGGGKDDAMGRDVMRLVTGSCDNRVRVWKCPAPTAGEVLGQGQLVWTDE--LTHSEPAHTDWVRDVAWAPATGMPFNTIASCGEDKAVYIWTQQEGGTEWTLTKMHEFSAPVWRLSWSVTGNVLAVSHGDDDVTLWKQNIEGRWEMVSSVEEGGRGPN 319          
BLAST of mRNA_H-elongata_contig75661.15250.1 vs. uniprot
Match: A0A662WIR4_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WIR4_9STRA)

HSP 1 Score: 224 bits (572), Expect = 5.490e-68
Identity = 110/199 (55.28%), Postives = 132/199 (66.33%), Query Frame = 0
Query:    1 SIAWAPHELGLILACASSDGRVSILQHQPNDEWHATFIQDSKLGCNAVSWAPYNSLGSREGGAEYMRLVTGSCDNRVRIWRCAVGTTEWQEEGNVQDASPRHSDWVRDVAWAPSTGMPCNIVASCSEDRSVIIWTQSQAAGPWSAAEMKTFTAPVWRVSWSITGNVLAVSSGTSDVSLWKQNLAGTWECISTVAEHGPV 199
            SIAWAPHE GL LACAS+DG VS                DS LGCNAVSWAP+NS+GS+       R+VT SCD  ++IW  A G TEW ++     ++P HSDWVRDVAWAPSTG+P N++ASCSED+ V IW+QS     W    + TF APVWRVSWS+TGNVLAVSSG   V+LWK+ L   W  IS+V E G +
Sbjct:  303 SIAWAPHEYGLSLACASADGTVS----------------DSALGCNAVSWAPFNSVGSQGPSGPIRRVVTASCDKTIKIWSLAEGETEWLKQ--ELSSAPAHSDWVRDVAWAPSTGLPVNLIASCSEDKHVYIWSQSAEDSAWKRELLHTFDAPVWRVSWSVTGNVLAVSSGDHKVTLWKETLDKKWIQISSVDEAGAI 483          
BLAST of mRNA_H-elongata_contig75661.15250.1 vs. uniprot
Match: K3XB55_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3XB55_GLOUD)

HSP 1 Score: 208 bits (530), Expect = 9.420e-64
Identity = 97/178 (54.49%), Postives = 124/178 (69.66%), Query Frame = 0
Query:   22 VSILQHQPNDEWHATFIQDSKLGCNAVSWAPYNSLGSREGGAEYMRLVTGSCDNRVRIWRCAVGTTEWQEEGNVQDASPRHSDWVRDVAWAPSTGMPCNIVASCSEDRSVIIWTQSQAAGPWSAAEMKTFTAPVWRVSWSITGNVLAVSSGTSDVSLWKQNLAGTWECISTVAEHGPV 199
            VS++ +   + W  +  +DS LGCNAVSWAP+N+LGS+       R+VT SCD  ++IW  A G TEW +E ++  A P HSDWVRD AWAPSTGMP N++ASCSED+ V IW+Q++  GPW    + TF APVWRVSWS+TGNVLAVSSG   V+LWK+ L   W  IS+V E G +
Sbjct:  130 VSVISYS-TEGWSVSHFKDSSLGCNAVSWAPFNALGSKGETGPIRRIVTASCDKTIKIWSLAEGQTEWTKE-DISSA-PAHSDWVRDAAWAPSTGMPVNLIASCSEDKHVYIWSQTEENGPWKRELLHTFEAPVWRVSWSVTGNVLAVSSGDHKVTLWKETLDKKWIQISSVDEAGTL 304          
BLAST of mRNA_H-elongata_contig75661.15250.1 vs. uniprot
Match: A0A6A0H1M0_HYAAZ (Protein SEC13 homolog n=2 Tax=Hyalella azteca TaxID=294128 RepID=A0A6A0H1M0_HYAAZ)

HSP 1 Score: 205 bits (522), Expect = 2.400e-62
Identity = 101/192 (52.60%), Postives = 128/192 (66.67%), Query Frame = 0
Query:    1 SIAWAPHELGLILACASSDGRVSILQHQPNDEWHATFIQDS-KLGCNAVSWAPYNSLGSREGGAEYMRLVTGSCDNRVRIWRCAVGTTEWQEEGNVQDASPRHSDWVRDVAWAPSTGMPCNIVASCSEDRSVIIWTQSQAAGPWSAAEMKTFTAPVWRVSWSITGNVLAVSSGTSDVSLWKQNLAGTWECIS 191
            S+ WAPHELGL+LACASSDG VS+L +     WHA  I ++  +GCNAVSWAP  S     GG    RLVTG CD+ V+IWR   G  EW EE  ++     HSDWVRDVAWAPS G+  +++ASCS+D  V+IWT     G + + E+ +F   +W VSWS+TGN+LAVS G + VSLWK+N  G W C+S
Sbjct:  117 SVCWAPHELGLMLACASSDGSVSVLTYTAAHTWHAVKITNAHNVGCNAVSWAPAVS----SGGLTQQRLVTGGCDSYVKIWRYESG--EWVEEAKLEG----HSDWVRDVAWAPSCGLGTSVIASCSQDCRVLIWTGDN--GQFRSKELPSFADVIWHVSWSVTGNILAVSGGDNRVSLWKENTEGQWVCLS 296          
BLAST of mRNA_H-elongata_contig75661.15250.1 vs. uniprot
Match: A0A067C8H3_SAPPC (Uncharacterized protein (Fragment) n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C8H3_SAPPC)

HSP 1 Score: 205 bits (521), Expect = 3.300e-62
Identity = 101/205 (49.27%), Postives = 137/205 (66.83%), Query Frame = 0
Query:    1 SIAWAPHELGLILACASSDGRVSILQHQPNDEWHAT-FIQDSKLGCNAVSWAPYNSLGSREGGAEYMRLVTGSCDNRVRIWRC--AVGTTEWQEEGNVQDASPRHSDWVRDVAWAPSTGMPCNIVASCSEDRSVIIWTQSQAAGPWSAAEMKTFTAPVWRVSWSITGNVLAVSSGTSDVSLWKQNLAGTWECISTVAEHGPVPSP 202
            +I +APHE GL+LA AS+DG V++L     + W  T    D+ +GC A+SWAPYNSLG    G  + RLV G CD+ V+IW    A  +  WQ    +++  P H DWVRDV WAPS GMPCN +ASCS+D +V +WTQS A GPWS+  + TF +PV+R+SWSITGN+L+V++G   VSLWK++  GTW  +S++ E     +P
Sbjct:  123 AIDFAPHEYGLMLASASADGTVAVLT-MTREGWVTTSHFHDNDVGCMALSWAPYNSLG----GQGHKRLVVGGCDSLVKIWTLSDADSSRTWQR---IEELPPLHGDWVRDVLWAPSAGMPCNTIASCSDDHTVAVWTQSTAGGPWSSVVLPTFKSPVFRLSWSITGNILSVAAGEDHVSLWKESN-GTWRQLSSLQEGSASINP 318          
BLAST of mRNA_H-elongata_contig75661.15250.1 vs. uniprot
Match: UPI001E1D932E (protein SEC13 homolog n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D932E)

HSP 1 Score: 202 bits (514), Expect = 3.150e-61
Identity = 107/209 (51.20%), Postives = 135/209 (64.59%), Query Frame = 0
Query:    1 SIAWAPHELGLILACASSDGRVSILQHQPNDEWHATFIQDSK-LGCNAVSWAPY---NSLGSREGG-AEYMRLVTGSCDNRVRIWRCAVGTTEWQEEGNVQDASPRHSDWVRDVAWAPSTGMPCNIVASCSEDRSVIIWTQSQAAGPWSAAEMKTFTAPVWRVSWSITGNVLAVSSGTSDVSLWKQNLAGTWECISTVAE-HGPVPSPQ 203
            S+ +APHELGL+LAC SSDG VS+L    +  W A  I+ +  +GCNAVSWAP    N+L  + G  A   +LV+G CDN V+IWR   G  EW EE  ++     HSDWVRDVAWAPS G+P +I+ASCS+D  VIIWT    +  WS++ +  F   VW +SWSITGN+LAVS G + VSLWK+ L G W CIS V +  G V   Q
Sbjct:  108 SVCFAPHELGLVLACGSSDGSVSVLSSTGDGSWDAKKIKSAHTIGCNAVSWAPALSPNALFEQTGRPALVKKLVSGGCDNLVKIWREEDG--EWIEEQKLEG----HSDWVRDVAWAPSIGLPKSIIASCSQDCRVIIWTNDGTSNNWSSSVLNKFKDVVWHLSWSITGNILAVSGGDNKVSLWKETLEGQWVCISDVKKGQGQVTDSQ 310          
BLAST of mRNA_H-elongata_contig75661.15250.1 vs. uniprot
Match: D0NKZ1_PHYIT (Protein transport protein SEC13 n=16 Tax=Peronosporaceae TaxID=4777 RepID=D0NKZ1_PHYIT)

HSP 1 Score: 201 bits (511), Expect = 7.100e-61
Identity = 96/180 (53.33%), Postives = 121/180 (67.22%), Query Frame = 0
Query:   22 VSILQHQPNDEWHATFIQDSKLGCNAVSWAPYNSLGSREGGAEYMRLVTGSCDNRVRIWRCAVGTTEW--QEEGNVQDASPRHSDWVRDVAWAPSTGMPCNIVASCSEDRSVIIWTQSQAAGPWSAAEMKTFTAPVWRVSWSITGNVLAVSSGTSDVSLWKQNLAGTWECISTVAEHGPV 199
            VS+L + P + W  +  +DS LGCNAVSWAP+NS+GS+       R++T SCD  ++IW    G TEW  QE  +V    P HSDWVRDVAWAPSTG+P N++ASCSED+ V IW+Q+     W    + TF APVWRVSWS+TGNVLAVSSG   V+LWK+ L   W  IS+V E G +
Sbjct:  130 VSVLSYSP-EGWSVSHFKDSALGCNAVSWAPFNSVGSQGPSGPIRRVMTASCDKTIKIWSLPEGETEWTKQELSSV----PAHSDWVRDVAWAPSTGLPVNLIASCSEDKHVYIWSQTAEDSSWKRELLHTFDAPVWRVSWSVTGNVLAVSSGDHKVTLWKETLDKKWIQISSVDEAGAI 304          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig75661.15250.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLD9_ECTSI6.730e-10883.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W2QRD8_PHYPN6.210e-7655.78Protein transporter SEC13 n=1 Tax=Phytophthora par... [more]
A0A7S0C2K8_9STRA5.720e-7255.34Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A836CBZ9_9STRA3.800e-7154.74WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A662WIR4_9STRA5.490e-6855.28Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
K3XB55_GLOUD9.420e-6454.49Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4... [more]
A0A6A0H1M0_HYAAZ2.400e-6252.60Protein SEC13 homolog n=2 Tax=Hyalella azteca TaxI... [more]
A0A067C8H3_SAPPC3.300e-6249.27Uncharacterized protein (Fragment) n=2 Tax=Saprole... [more]
UPI001E1D932E3.150e-6151.20protein SEC13 homolog n=1 Tax=Mercenaria mercenari... [more]
D0NKZ1_PHYIT7.100e-6153.33Protein transport protein SEC13 n=16 Tax=Peronospo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 92..135
e-value: 0.0048
score: 26.1
coord: 30..81
e-value: 2.3
score: 14.7
coord: 141..180
e-value: 0.57
score: 18.6
IPR001680WD40 repeatPFAMPF00400WD40coord: 102..134
e-value: 0.012
score: 16.5
coord: 45..80
e-value: 0.052
score: 14.4
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..195
e-value: 7.1E-54
score: 184.8
IPR037363Sec13/Seh1 familyPANTHERPTHR11024NUCLEAR PORE COMPLEX PROTEIN SEC13 / SEH1 FAMILY MEMBERcoord: 1..193
IPR037596Protein Sec13PANTHERPTHR11024:SF2PROTEIN SEC13 HOMOLOGcoord: 1..193
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 68..180
score: 10.469
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 2..197

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig75661contigH-elongata_contig75661:1129..1862 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig75661.15250.1mRNA_H-elongata_contig75661.15250.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig75661 1129..1862 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig75661.15250.1 ID=prot_H-elongata_contig75661.15250.1|Name=mRNA_H-elongata_contig75661.15250.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=205bp
SIAWAPHELGLILACASSDGRVSILQHQPNDEWHATFIQDSKLGCNAVSW
APYNSLGSREGGAEYMRLVTGSCDNRVRIWRCAVGTTEWQEEGNVQDASP
RHSDWVRDVAWAPSTGMPCNIVASCSEDRSVIIWTQSQAAGPWSAAEMKT
FTAPVWRVSWSITGNVLAVSSGTSDVSLWKQNLAGTWECISTVAEHGPVP
SPQY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR037363Sec13/Seh1_fam
IPR037596Sec13
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf