prot_H-elongata_contig75499.15233.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig75499.15233.1
Unique Nameprot_H-elongata_contig75499.15233.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length109
Homology
[Close]
BLAST of mRNA_H-elongata_contig75499.15233.1 vs. uniprot
Match: D7G2C0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2C0_ECTSI)

HSP 1 Score: 231 bits (588), Expect = 1.220e-73
Identity = 104/108 (96.30%), Postives = 106/108 (98.15%), Query Frame = 0 
Query:    1 YPFCKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVSFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLAGHENRVSCLGVNPKGEALCTGSWDTLLKIWA 108
            +P  KAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSV+FSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLAGHENRVSCLGVNPKGEALCTGSWDTLLKIWA
Sbjct:  242 FPDGKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLAGHENRVSCLGVNPKGEALCTGSWDTLLKIWA 349
[Close]
BLAST of mRNA_H-elongata_contig75499.15233.1 vs. uniprot
Match: A0A836CC21_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC21_9STRA)

HSP 1 Score: 224 bits (570), Expect = 6.820e-71
Identity = 99/108 (91.67%), Postives = 105/108 (97.22%), Query Frame = 0 
Query:    1 YPFCKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVSFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLAGHENRVSCLGVNPKGEALCTGSWDTLLKIWA 108
            +P  K+FGTGSDDSSCRLFDMRCYGE NYFGNDKILCGITSV+FSRSGRLLFAGYDDYNCYVWDVT++TG+PAYQLAGHENRVSCLGVNPKGEALCTGSWDTLLKIWA
Sbjct:  244 FPDGKSFGTGSDDSSCRLFDMRCYGEVNYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTSNTGMPAYQLAGHENRVSCLGVNPKGEALCTGSWDTLLKIWA 351
[Close]
BLAST of mRNA_H-elongata_contig75499.15233.1 vs. uniprot
Match: A0A3R6Z757_9STRA (Uncharacterized protein n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A0A3R6Z757_9STRA)

HSP 1 Score: 189 bits (481), Expect = 2.150e-57
Identity = 82/108 (75.93%), Postives = 92/108 (85.19%), Query Frame = 0 
Query:    1 YPFCKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVSFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLAGHENRVSCLGVNPKGEALCTGSWDTLLKIWA 108
            +P   A GTGSDDSSCRLFD+R YGE N F NDKILCGITSVS+S+SGR +FAGYDDYNCY WDV ++TG   YQL GHENRVSCLGV+P G+ALCTGSWDTLLK+WA
Sbjct:  251 FPDGNALGTGSDDSSCRLFDLRAYGELNNFSNDKILCGITSVSYSKSGRFMFAGYDDYNCYCWDVLSNTGAHVYQLTGHENRVSCLGVSPSGQALCTGSWDTLLKVWA 358
[Close]
BLAST of mRNA_H-elongata_contig75499.15233.1 vs. uniprot
Match: A0A7S2HG74_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HG74_9STRA)

HSP 1 Score: 186 bits (471), Expect = 6.010e-56
Identity = 86/109 (78.90%), Postives = 94/109 (86.24%), Query Frame = 0 
Query:    1 YPFCKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVSFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQL-AGHENRVSCLGVNPKGEALCTGSWDTLLKIWA 108
            +P  KAFGTGSDDS+CRLFDMRCYGE N FGND+ILCGITSV FS+SGRLLFAGYDDYN  VWDV ++    A+QL   HENRVSCLGVNPKG+ALCTGSWDTLLKIWA
Sbjct:  245 FPDGKAFGTGSDDSTCRLFDMRCYGEVNRFGNDRILCGITSVGFSKSGRLLFAGYDDYNTIVWDVLSTGKQQAFQLHQPHENRVSCLGVNPKGDALCTGSWDTLLKIWA 353
[Close]
BLAST of mRNA_H-elongata_contig75499.15233.1 vs. uniprot
Match: A0A6V1KDD3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1KDD3_HETAK)

HSP 1 Score: 185 bits (470), Expect = 7.270e-56
Identity = 83/108 (76.85%), Postives = 91/108 (84.26%), Query Frame = 0 
Query:    1 YPFCKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVSFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLAGHENRVSCLGVNPKGEALCTGSWDTLLKIWA 108
            +P   AFGTGSDDSSCR+FDMRCYGE N FGND+ILCGITSVSFS+SGRLLFAGYDDYN YVWD   +     ++L GH+NRVSCLGVNP GEAL TGSWDTLLKIWA
Sbjct:  240 FPDGFAFGTGSDDSSCRMFDMRCYGEVNQFGNDRILCGITSVSFSKSGRLLFAGYDDYNSYVWDTLKNDPSETFKLQGHDNRVSCLGVNPTGEALVTGSWDTLLKIWA 347
[Close]
BLAST of mRNA_H-elongata_contig75499.15233.1 vs. uniprot
Match: A0A397FXD3_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A397FXD3_9STRA)

HSP 1 Score: 189 bits (481), Expect = 1.530e-54
Identity = 82/108 (75.93%), Postives = 92/108 (85.19%), Query Frame = 0 
Query:    1 YPFCKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVSFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLAGHENRVSCLGVNPKGEALCTGSWDTLLKIWA 108
            +P   A GTGSDDSSCRLFD+R YGE N F NDKILCGITSVS+S+SGR +FAGYDDYNCY WDV ++TG   YQL GHENRVSCLGV+P G+ALCTGSWDTLLK+WA
Sbjct:  606 FPDGNALGTGSDDSSCRLFDLRAYGELNNFSNDKILCGITSVSYSKSGRFMFAGYDDYNCYCWDVLSNTGAHVYQLTGHENRVSCLGVSPSGQALCTGSWDTLLKVWA 713
[Close]
BLAST of mRNA_H-elongata_contig75499.15233.1 vs. uniprot
Match: A0A7R9Z4N3_9STRA (Hypothetical protein n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z4N3_9STRA)

HSP 1 Score: 176 bits (445), Expect = 4.690e-52
Identity = 80/109 (73.39%), Postives = 91/109 (83.49%), Query Frame = 0 
Query:    1 YPFCKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVSFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLAG-HENRVSCLGVNPKGEALCTGSWDTLLKIWA 108
            +P   AFGTGSDDS+CRLFDMRCYGE N F ++KILCGITSV+FSRSGRLLFAGYDD+NCY WD  ++    A+QL   H+NRVSCLGV+P G ALCTGSWDTLLKIWA
Sbjct:  244 FPGGHAFGTGSDDSTCRLFDMRCYGEVNKFAHEKILCGITSVAFSRSGRLLFAGYDDFNCYSWDTLSNGKNHAFQLPQPHDNRVSCLGVSPNGNALCTGSWDTLLKIWA 352
[Close]
BLAST of mRNA_H-elongata_contig75499.15233.1 vs. uniprot
Match: A0A482SP31_9ARCH (WD40 repeat domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SP31_9ARCH)

HSP 1 Score: 166 bits (419), Expect = 2.980e-50
Identity = 74/108 (68.52%), Postives = 85/108 (78.70%), Query Frame = 0 
Query:    1 YPFCKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVSFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLAGHENRVSCLGVNPKGEALCTGSWDTLLKIWA 108
            +P  K  GTGSDD++CR FD+R  GE + F +D I+CGITSV+FSRSGR+LFAGYDDYNC  WDV  ST    YQL GHENRVSCL + P GEALCTGSWDT+LKIWA
Sbjct:   71 FPDGKGIGTGSDDTTCRFFDIRSCGEVSQFRSDNIVCGITSVTFSRSGRILFAGYDDYNCLGWDVLGSTDKHHYQLQGHENRVSCLDMAPSGEALCTGSWDTMLKIWA 178
[Close]
BLAST of mRNA_H-elongata_contig75499.15233.1 vs. uniprot
Match: A0A7R9U5X6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5X6_9STRA)

HSP 1 Score: 164 bits (415), Expect = 3.250e-50
Identity = 75/109 (68.81%), Postives = 88/109 (80.73%), Query Frame = 0 
Query:    1 YPFCKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVSFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAY-QLAGHENRVSCLGVNPKGEALCTGSWDTLLKIWA 108
            +P  K   +GSDD++CRLFDMR Y + N F ++KILCG+TSVSFSRSGRLLFAGYDDY   VWD + S+  PA+  L GHENRVSCLGV+P G+ALCTGSWDTLLKIWA
Sbjct:   28 FPDSKGLASGSDDATCRLFDMRSYSQLNDFASEKILCGVTSVSFSRSGRLLFAGYDDYTNCVWDASLSSFSPAFGSLQGHENRVSCLGVSPNGDALCTGSWDTLLKIWA 136
[Close]
BLAST of mRNA_H-elongata_contig75499.15233.1 vs. uniprot
Match: A0A6U5JG09_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5JG09_9STRA)

HSP 1 Score: 167 bits (424), Expect = 6.430e-49
Identity = 73/109 (66.97%), Postives = 89/109 (81.65%), Query Frame = 0 
Query:    1 YPFCKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVSFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLA-GHENRVSCLGVNPKGEALCTGSWDTLLKIWA 108
            +P   +FGTGSDDSSCRLFD+RCY + N F +DKILCGITSV+FS+SGR+LFAGY+D+N + WD  +    PAY L  GHENRVSC+GV+P+G+ALCTGSWD  LKIWA
Sbjct:  243 FPDGNSFGTGSDDSSCRLFDLRCYNQVNSFVHDKILCGITSVAFSKSGRILFAGYEDFNTFAWDTLSDGTAPAYSLKDGHENRVSCVGVSPRGDALCTGSWDNSLKIWA 351
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig75499.15233.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2C0_ECTSI1.220e-7396.30Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CC21_9STRA6.820e-7191.67WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A3R6Z757_9STRA2.150e-5775.93Uncharacterized protein n=7 Tax=Saprolegniaceae Ta... [more]
A0A7S2HG74_9STRA6.010e-5678.90Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A6V1KDD3_HETAK7.270e-5676.85Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A397FXD3_9STRA1.530e-5475.93Uncharacterized protein n=6 Tax=Aphanomyces TaxID=... [more]
A0A7R9Z4N3_9STRA4.690e-5273.39Hypothetical protein n=2 Tax=Pseudictyota dubia Ta... [more]
A0A482SP31_9ARCH2.980e-5068.52WD40 repeat domain-containing protein n=1 Tax=arch... [more]
A0A7R9U5X6_9STRA3.250e-5068.81Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6U5JG09_9STRA6.430e-4966.97Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 69..108
e-value: 4.3E-5
score: 32.9
coord: 22..64
e-value: 0.27
score: 20.3
IPR001680WD40 repeatPFAMPF00400WD40coord: 75..107
e-value: 1.3E-4
score: 22.6
coord: 38..64
e-value: 3.3E-5
score: 24.6
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 39..73
score: 9.205
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 76..108
score: 13.717
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..108
e-value: 1.8E-30
score: 107.8
IPR016346Guanine nucleotide-binding protein, beta subunitPANTHERPTHR19850GUANINE NUCLEOTIDE-BINDING PROTEIN BETA G PROTEIN BETAcoord: 2..108
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 51..65
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..108
score: 18.167
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 6..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig75499contigH-elongata_contig75499:281..1621 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig75499.15233.1mRNA_H-elongata_contig75499.15233.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig75499 281..1621 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig75499.15233.1 ID=prot_H-elongata_contig75499.15233.1|Name=mRNA_H-elongata_contig75499.15233.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=109bp
YPFCKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVSFSRSGRL
LFAGYDDYNCYVWDVTNSTGIPAYQLAGHENRVSCLGVNPKGEALCTGSW
DTLLKIWA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR016346Guanine_nucleotide-bd_bsu
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf