prot_H-elongata_contig7543.15229.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig7543.15229.1
Unique Name	prot_H-elongata_contig7543.15229.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	157

Homology

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BLAST of mRNA_H-elongata_contig7543.15229.1 vs. uniprot
Match: A0A8D1CTC0_PIG (KH type-2 domain-containing protein n=1 Tax=Sus scrofa TaxID=9823 RepID=A0A8D1CTC0_PIG)

HSP 1 Score: 256 bits (653), Expect = 1.580e-85
Identity = 130/136 (95.59%), Postives = 134/136 (98.53%), Query Frame = 0

Query:    1 MAANISKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEV 136
            MA N+SKKRKFVADGVF+ ELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRF+FPDDAVELYAERV+KRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEV
Sbjct:    1 MATNMSKKRKFVADGVFFVELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFSFPDDAVELYAERVSKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEV 136

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BLAST of mRNA_H-elongata_contig7543.15229.1 vs. uniprot
Match: D7G6B0_ECTSI (KH type-2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6B0_ECTSI)

HSP 1 Score: 256 bits (654), Expect = 1.550e-84
Identity = 131/132 (99.24%), Postives = 132/132 (100.00%), Query Frame = 0

Query:    5 ISKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEV 136
            +SKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEV
Sbjct:    1 MSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEV 132

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BLAST of mRNA_H-elongata_contig7543.15229.1 vs. uniprot
Match: A0A7S2UUD3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUD3_9STRA)

HSP 1 Score: 249 bits (636), Expect = 1.030e-81
Identity = 128/136 (94.12%), Postives = 131/136 (96.32%), Query Frame = 0

Query:    1 MAANISKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEV 136
            MA+NISKKRKFVADGVFYAELN+LLT ELAE+GYAGVEVRVTPLRTEIII ATR QNVLGEKGQRIRELTSVVQKRFNF DDAVELYAERVA RGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEV
Sbjct:    1 MASNISKKRKFVADGVFYAELNQLLTSELAEDGYAGVEVRVTPLRTEIIIRATRTQNVLGEKGQRIRELTSVVQKRFNFADDAVELYAERVANRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEV 136

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BLAST of mRNA_H-elongata_contig7543.15229.1 vs. uniprot
Match: A0A6V2VE19_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2VE19_HETAK)

HSP 1 Score: 244 bits (623), Expect = 9.490e-80
Identity = 125/136 (91.91%), Postives = 130/136 (95.59%), Query Frame = 0

Query:    1 MAANISKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEV 136
            MA NISKKRKFVADGVFYAELNELLT+ELAE+GYAG+EVR TP+RTEIII ATR Q+VLGEKGQRIRELTSVVQKRFNF DDAVELYAERVA RGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEV
Sbjct:    1 MAPNISKKRKFVADGVFYAELNELLTRELAEDGYAGLEVRTTPIRTEIIIRATRTQSVLGEKGQRIRELTSVVQKRFNFNDDAVELYAERVANRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEV 136

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BLAST of mRNA_H-elongata_contig7543.15229.1 vs. uniprot
Match: A0A836CGW2_9STRA (Prokaryotic type K homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGW2_9STRA)

HSP 1 Score: 243 bits (621), Expect = 1.790e-79
Identity = 123/136 (90.44%), Postives = 131/136 (96.32%), Query Frame = 0

Query:    1 MAANISKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEV 136
            M  NISKKRKFVADGVFYAELNEL+ +ELAE+GY+GVEVRVTPLRTEIII AT+PQNVLGEKGQRIRELTSVVQKRF+FPD+AVELYAERVA RGLCAQTQAESLKYKL+GGLAVRRACYGVLRFIMESGAKGAEV
Sbjct:    1 MTTNISKKRKFVADGVFYAELNELMRRELAEDGYSGVEVRVTPLRTEIIIRATQPQNVLGEKGQRIRELTSVVQKRFSFPDNAVELYAERVAVRGLCAQTQAESLKYKLVGGLAVRRACYGVLRFIMESGAKGAEV 136

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BLAST of mRNA_H-elongata_contig7543.15229.1 vs. uniprot
Match: W7TS51_9STRA (40s ribosomal protein s3-3 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TS51_9STRA)

HSP 1 Score: 239 bits (610), Expect = 1.510e-77
Identity = 119/136 (87.50%), Postives = 127/136 (93.38%), Query Frame = 0

Query:    1 MAANISKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEV 136
            M  NISKKRKF+ADGVFYAELNELLT+ELAE+GYAGVEVRV PLRTEIIISATR QNVLGEKGQRIRELT+V+QKRFNFPD  VEL+AE+VA RGLCAQ QAESLKYKLLGGLAVRRACYGVLRF+ME GAKGAEV
Sbjct:    1 MTTNISKKRKFIADGVFYAELNELLTRELAEDGYAGVEVRVVPLRTEIIISATRTQNVLGEKGQRIRELTTVIQKRFNFPDGVVELFAEKVASRGLCAQAQAESLKYKLLGGLAVRRACYGVLRFVMEQGAKGAEV 136

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BLAST of mRNA_H-elongata_contig7543.15229.1 vs. uniprot
Match: F0YDG3_AURAN (KH type-2 domain-containing protein n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0YDG3_AURAN)

HSP 1 Score: 235 bits (600), Expect = 3.390e-76
Identity = 120/134 (89.55%), Postives = 126/134 (94.03%), Query Frame = 0

Query:    3 ANISKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEV 136
            A ISKKRKFVADG+FYAELNELLT+ELAE+GYAGVEVRVTPLRTEIII ATR QNVLGEKGQRIRELTSVVQKRF+F D AVELYAERVA RGLCAQ QAESLKYKLLGGLAVRRACYGV+RF+MESGAKG EV
Sbjct:    2 ATISKKRKFVADGLFYAELNELLTRELAEDGYAGVEVRVTPLRTEIIIRATRTQNVLGEKGQRIRELTSVVQKRFHFQDGAVELYAERVANRGLCAQAQAESLKYKLLGGLAVRRACYGVVRFVMESGAKGVEV 135

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BLAST of mRNA_H-elongata_contig7543.15229.1 vs. uniprot
Match: C0HE21_MAIZE (KH type-2 domain-containing protein n=2 Tax=Zea mays TaxID=4577 RepID=C0HE21_MAIZE)

HSP 1 Score: 230 bits (587), Expect = 2.070e-75
Identity = 114/137 (83.21%), Postives = 127/137 (92.70%), Query Frame = 0

Query:    1 MAANISKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVS 137
            MA  ISKK+KFV+DGVFYAELNE+LT+ELAE+GY+GVEVRVTP+RTEIII ATR QNVLGEKG+RIRELTSVVQKRFNFP++ VELYAE+V  RGLCA  QAESL+YKLLGGLAVRRACYGVLRF+MESGAKG EVS
Sbjct:    1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVS 137

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BLAST of mRNA_H-elongata_contig7543.15229.1 vs. uniprot
Match: A0A250XCE2_9CHLO (KH type-2 domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XCE2_9CHLO)

HSP 1 Score: 232 bits (591), Expect = 8.720e-75
Identity = 116/136 (85.29%), Postives = 127/136 (93.38%), Query Frame = 0

Query:    1 MAANISKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEV 136
            MA  ISKKRKFVADGVFYAELNELLT+EL+E+GY+GVEVRVTP+RTEIII ATR QNVLGEKG+RIRELTSVVQKRFNFP D+VELYAE+V+ RGLCA  QAESL+YKLLGGLAVRRACYGVLRF+MESGAKG EV
Sbjct:    1 MATQISKKRKFVADGVFYAELNELLTRELSEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPPDSVELYAEKVSDRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEV 136

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BLAST of mRNA_H-elongata_contig7543.15229.1 vs. uniprot
Match: A0A383VTV7_TETOB (30S ribosomal protein S3, chloroplastic n=2 Tax=Scenedesmaceae TaxID=3086 RepID=A0A383VTV7_TETOB)

HSP 1 Score: 232 bits (591), Expect = 9.010e-75
Identity = 115/136 (84.56%), Postives = 126/136 (92.65%), Query Frame = 0

Query:    1 MAANISKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEV 136
            MA NISKKRKF+ADGVF+AELNELLT+ELAE+GY+GVEVRVTP+RTEIII ATR QNVLGEKG+RIRELTS VQKRFNFP + VELYAE+VA RGLCA  QAESL+YKLLGGLAVRRACYGVLRF+MESGAKG EV
Sbjct:    1 MATNISKKRKFIADGVFFAELNELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSAVQKRFNFPPETVELYAEKVANRGLCAVAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEV 136

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig7543.15229.1 vs. uniprot

BLAST of mRNA_H-elongata_contig7543.15229.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A8D1CTC0_PIG	1.580e-85	95.59	KH type-2 domain-containing protein n=1 Tax=Sus sc...	[more]
D7G6B0_ECTSI	1.550e-84	99.24	KH type-2 domain-containing protein n=1 Tax=Ectoca...	[more]
A0A7S2UUD3_9STRA	1.030e-81	94.12	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A6V2VE19_HETAK	9.490e-80	91.91	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A836CGW2_9STRA	1.790e-79	90.44	Prokaryotic type K homology domain-containing prot...	[more]
W7TS51_9STRA	1.510e-77	87.50	40s ribosomal protein s3-3 n=3 Tax=Monodopsidaceae...	[more]
F0YDG3_AURAN	3.390e-76	89.55	KH type-2 domain-containing protein n=2 Tax=Pelago...	[more]
C0HE21_MAIZE	2.070e-75	83.21	KH type-2 domain-containing protein n=2 Tax=Zea ma...	[more]
A0A250XCE2_9CHLO	8.720e-75	85.29	KH type-2 domain-containing protein n=1 Tax=Chlamy...	[more]
A0A383VTV7_TETOB	9.010e-75	84.56	30S ribosomal protein S3, chloroplastic n=2 Tax=Sc...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036419	Ribosomal protein S3, C-terminal domain superfamily	GENE3D	3.30.1140.32		coord: 93..139 e-value: 9.7E-21 score: 75.7
IPR036419	Ribosomal protein S3, C-terminal domain superfamily	SUPERFAMILY	54821	Ribosomal protein S3 C-terminal domain	coord: 93..137
IPR004044	K Homology domain, type 2	PFAM	PF07650	KH_2	coord: 20..94 e-value: 1.5E-12 score: 47.1
IPR004044	K Homology domain, type 2	PROSITE	PS50823	KH_TYPE_2	coord: 21..92 score: 12.181
IPR015946	K homology domain-like, alpha/beta	GENE3D	3.30.300.20		coord: 1..92 e-value: 4.7E-46 score: 156.7
None	No IPR available	PANTHER	PTHR11760	30S/40S RIBOSOMAL PROTEIN S3	coord: 1..138
None	No IPR available	PANTHER	PTHR11760:SF41		coord: 1..138
IPR009019	K homology domain superfamily, prokaryotic type	SUPERFAMILY	54814	Prokaryotic type KH domain (KH-domain type II)	coord: 10..99

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig7543	contig	H-elongata_contig7543:8761..10198 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig7543.15229.1	mRNA_H-elongata_contig7543.15229.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig7543 8761..10305 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig7543.15229.1 ID=prot_H-elongata_contig7543.15229.1|Name=mRNA_H-elongata_contig7543.15229.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=157bp
MAANISKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIII
SATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQT
QAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVSKNSSVGVFTICCH
PTLCHS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036419	Ribosomal_S3_C_sf
IPR004044	KH_dom_type_2
IPR015946	KH_dom-like_a/b
IPR009019	KH_sf_prok-type