mRNA_H-elongata_contig75398.15223.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig75398.15223.1 vs. uniprot
Match: D8LMK2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMK2_ECTSI) HSP 1 Score: 171 bits (433), Expect = 7.080e-51 Identity = 78/104 (75.00%), Postives = 91/104 (87.50%), Query Frame = 1
Query: 1 QDRGGEYRSLLGVPGGLEGAMANSINEEAKKRGLALLGGSGGDPDTLMKNKVFVMDTAKFPFYKGELYHQFHNDMTENYGRPYNALREKYAEDGKMEETGCPER 312
QDRGGEYRSLLGVPGGL G MA+ I +EA RGLAL G+GGDPDTLM+N VFVMDTA FPF+KGE+YHQFHNDM+E+YGR YN LR++YAE+G M+ETGCPE+
Sbjct: 190 QDRGGEYRSLLGVPGGLSGPMADPIKQEAAARGLALREGNGGDPDTLMRNTVFVMDTATFPFFKGEIYHQFHNDMSEDYGRKYNNLRKQYAEEGTMQETGCPEK 293
BLAST of mRNA_H-elongata_contig75398.15223.1 vs. uniprot
Match: A0A7S4NE84_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NE84_9STRA) HSP 1 Score: 117 bits (294), Expect = 8.680e-31 Identity = 54/104 (51.92%), Postives = 71/104 (68.27%), Query Frame = 1
Query: 4 DRGGEYRSLLGVPGGLEGAMANSINEEAKKRGLALLGGSGGDPDTLMKNKVFVMDTAKFPFYKGELYHQFHNDM-TENYGRPYNALREKYAEDGKMEETGCPER 312
DRGGEYRSL+G+PGG + + E A +G+ L G G DPDT K V+V DTAK+PFY+GE+YHQFHND + YG+ YN L + +DG++ TGCP+R
Sbjct: 55 DRGGEYRSLIGLPGGTSHPEYSKVEEAASAKGMRLEPGKGNDPDTFGKKLVYVYDTAKYPFYQGEVYHQFHNDFQSPPYGKAYNKLADMAFDDGRLGVTGCPDR 158
BLAST of mRNA_H-elongata_contig75398.15223.1 vs. uniprot
Match: A0A7S0AHU9_9STRA (Peptide-methionine (S)-S-oxide reductase n=2 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AHU9_9STRA) HSP 1 Score: 118 bits (296), Expect = 1.030e-30 Identity = 55/104 (52.88%), Postives = 72/104 (69.23%), Query Frame = 1
Query: 4 DRGGEYRSLLGVPGGLEGAMANSINEEAKKRGLALLGGSGGDPDTLMKNKVFVMDTAKFPFYKGELYHQFHNDM-TENYGRPYNALREKYAEDGKMEETGCPER 312
DRGGEYRSL+G+PGG+ + A +G+ L G G DPDTL + V+V DTAKFPFY+GE YHQFHND + YG+ YN L ++ EDG+++ TGCP+R
Sbjct: 153 DRGGEYRSLIGLPGGVNHPRYAEVEAAATAKGMKLEEGKGNDPDTLGRKLVYVYDTAKFPFYQGEAYHQFHNDFQSPAYGKKYNDLAKEAVEDGRVKVTGCPDR 256
BLAST of mRNA_H-elongata_contig75398.15223.1 vs. uniprot
Match: A0A1E7F0B9_9STRA (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F0B9_9STRA) HSP 1 Score: 118 bits (296), Expect = 2.420e-30 Identity = 54/104 (51.92%), Postives = 74/104 (71.15%), Query Frame = 1
Query: 4 DRGGEYRSLLGVPGGLEGAMANSINEEAKKRGLALLGGSGGDPDTLMKNKVFVMDTAKFPFYKGELYHQFHNDM-TENYGRPYNALREKYAEDGKMEETGCPER 312
D+GGEYRSL+G+PGG+ M S+ A+K G L+ G G D DTL K V+V D+ KFPFY+GE+YHQ+HND + NYG+ YN L + E+G+++ TGCP+R
Sbjct: 192 DKGGEYRSLIGLPGGMSHVMYPSVENAAEKAGFKLVQGLGNDGDTLGKQTVWVYDSNKFPFYQGEIYHQYHNDFQSPNYGKDYNKLADLAFEEGRLKVTGCPDR 295
BLAST of mRNA_H-elongata_contig75398.15223.1 vs. uniprot
Match: A0A7S2M6J5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M6J5_9STRA) HSP 1 Score: 117 bits (292), Expect = 5.600e-30 Identity = 54/104 (51.92%), Postives = 71/104 (68.27%), Query Frame = 1
Query: 4 DRGGEYRSLLGVPGGLEGAMANSINEEAKKRGLALLGGSGGDPDTLMKNKVFVMDTAKFPFYKGELYHQFHND-MTENYGRPYNALREKYAEDGKMEETGCPER 312
D+GGEYRSLLG+PGG + + K RG+ L+ G G DPDTL K V+V D+ KFPFY+ E YHQ+HND +T YG+ YN L E +DG+++ TGCP+R
Sbjct: 167 DKGGEYRSLLGLPGGSKHPAFAQVEAAGKARGMTLVDGKGNDPDTLGKRLVYVYDSNKFPFYQAEFYHQYHNDFLTPAYGKEYNNLAEAALDDGRIKITGCPDR 270
BLAST of mRNA_H-elongata_contig75398.15223.1 vs. uniprot
Match: A0A7S4K336_9STRA (Peptide-methionine (S)-S-oxide reductase n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K336_9STRA) HSP 1 Score: 117 bits (294), Expect = 1.200e-29 Identity = 54/104 (51.92%), Postives = 71/104 (68.27%), Query Frame = 1
Query: 4 DRGGEYRSLLGVPGGLEGAMANSINEEAKKRGLALLGGSGGDPDTLMKNKVFVMDTAKFPFYKGELYHQFHNDM-TENYGRPYNALREKYAEDGKMEETGCPER 312
DRGGEYRSL+G+PGG + + E A +G+ L G G DPDT K V+V DTAK+PFY+GE+YHQFHND + YG+ YN L + +DG++ TGCP+R
Sbjct: 179 DRGGEYRSLIGLPGGTSHPEYSKVEEAASAKGMRLEPGKGNDPDTFGKKLVYVYDTAKYPFYQGEVYHQFHNDFQSPPYGKAYNKLADMAFDDGRLGVTGCPDR 282
BLAST of mRNA_H-elongata_contig75398.15223.1 vs. uniprot
Match: A0A448YZ63_9STRA (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YZ63_9STRA) HSP 1 Score: 116 bits (290), Expect = 1.500e-29 Identity = 54/104 (51.92%), Postives = 72/104 (69.23%), Query Frame = 1
Query: 4 DRGGEYRSLLGVPGGLEGAMANSINEEAKKRGLALLGGSGGDPDTLMKNKVFVMDTAKFPFYKGELYHQFHNDM-TENYGRPYNALREKYAEDGKMEETGCPER 312
DRG EYRSL+G+PGG++ + A+K G L+ G G DPDTL K V+V D+ KFPFY+GE+YHQ+HND + YG+ YN L E EDG+++ TGCP+R
Sbjct: 181 DRGAEYRSLIGLPGGMKHTSYPLVESAAEKAGFKLVEGKGNDPDTLGKQIVYVYDSTKFPFYQGEVYHQYHNDFQSPAYGKEYNNLVEVALEDGRIKGTGCPDR 284
BLAST of mRNA_H-elongata_contig75398.15223.1 vs. uniprot
Match: A0A7S2L8U9_9STRA (Peptide-methionine (S)-S-oxide reductase n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L8U9_9STRA) HSP 1 Score: 116 bits (290), Expect = 1.660e-29 Identity = 54/104 (51.92%), Postives = 72/104 (69.23%), Query Frame = 1
Query: 4 DRGGEYRSLLGVPGGLEGAMANSINEEAKKRGLALLGGSGGDPDTLMKNKVFVMDTAKFPFYKGELYHQFHNDM-TENYGRPYNALREKYAEDGKMEETGCPER 312
D+GGEYRSLLG+PGG M + A +G+ L G G DPDTL K V+VMD+ KFPFY+ E+YHQFHND + YG+ YN L + +DG++++TGCP+R
Sbjct: 183 DKGGEYRSLLGLPGGTSHPMYPQVEAAAAAKGMTLALGKGNDPDTLGKKLVYVMDSNKFPFYQAEVYHQFHNDFQSPAYGKAYNDLVKDAFDDGRVKDTGCPDR 286
BLAST of mRNA_H-elongata_contig75398.15223.1 vs. uniprot
Match: A0A1Z5KRN0_FISSO (Peptide-methionine (S)-S-oxide reductase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KRN0_FISSO) HSP 1 Score: 115 bits (289), Expect = 1.750e-29 Identity = 53/104 (50.96%), Postives = 72/104 (69.23%), Query Frame = 1
Query: 4 DRGGEYRSLLGVPGGLEGAMANSINEEAKKRGLALLGGSGGDPDTLMKNKVFVMDTAKFPFYKGELYHQFHNDM-TENYGRPYNALREKYAEDGKMEETGCPER 312
DRGGEYRSL+G+PGG + I + A+ G L G G DPDTL + V+V DT +FPFY+ E+YHQFHND ++ YG+ YNA+ + EDG+++ TGCP+R
Sbjct: 172 DRGGEYRSLMGLPGGTSHPLYPDIVQVAQSAGFTLKPGKGSDPDTLRQQLVYVYDTKEFPFYQAEVYHQFHNDFQSKPYGKEYNAIADLALEDGRIKPTGCPDR 275
BLAST of mRNA_H-elongata_contig75398.15223.1 vs. uniprot
Match: B5YN67_THAPS (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YN67_THAPS) HSP 1 Score: 119 bits (299), Expect = 3.720e-29 Identity = 56/104 (53.85%), Postives = 73/104 (70.19%), Query Frame = 1
Query: 4 DRGGEYRSLLGVPGGLEGAMANSINEEAKKRGLALLGGSGGDPDTLMKNKVFVMDTAKFPFYKGELYHQFHND-MTENYGRPYNALREKYAEDGKMEETGCPER 312
D+GGEYRSLLG+PGG M + AK RG+ L+ G G DPDTL K V+VMD+ KFPFY+ E+YHQ+HND ++ YG+ YN L E DG+++ TGCP+R
Sbjct: 181 DKGGEYRSLLGLPGGKGHPMYAQVEAAAKDRGMTLVDGKGNDPDTLGKRLVYVMDSNKFPFYQAEVYHQYHNDFLSSAYGKEYNNLVEAAVADGRIKITGCPDR 284 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig75398.15223.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig75398.15223.1 >prot_H-elongata_contig75398.15223.1 ID=prot_H-elongata_contig75398.15223.1|Name=mRNA_H-elongata_contig75398.15223.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=110bp QDRGGEYRSLLGVPGGLEGAMANSINEEAKKRGLALLGGSGGDPDTLMKNback to top mRNA from alignment at H-elongata_contig75398:1810..2860- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig75398.15223.1 ID=mRNA_H-elongata_contig75398.15223.1|Name=mRNA_H-elongata_contig75398.15223.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1051bp|location=Sequence derived from alignment at H-elongata_contig75398:1810..2860- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig75398:1810..2860- >mRNA_H-elongata_contig75398.15223.1 ID=mRNA_H-elongata_contig75398.15223.1|Name=mRNA_H-elongata_contig75398.15223.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=660bp|location=Sequence derived from alignment at H-elongata_contig75398:1810..2860- (Himanthalia elongata Himel1 dioecious)back to top |