prot_H-elongata_contig75364.15219.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig75364.15219.1
Unique Nameprot_H-elongata_contig75364.15219.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length153
Homology
[Close]
BLAST of mRNA_H-elongata_contig75364.15219.1 vs. uniprot
Match: D7FLK3_ECTSI (AAA ATPase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLK3_ECTSI)

HSP 1 Score: 124 bits (312), Expect = 3.530e-30
Identity = 79/171 (46.20%), Postives = 98/171 (57.31%), Query Frame = 0 
Query:    5 NVRDPLTEVGVTPTCLRGLKLLSGGWLRLFPA---------SSTTSPAHRGS----LEPHDGEVQANATRGAPVVGLLCRAIAITAASDWCEVNERGESSR--------LSDGEILIPPSVAFNGRLGPFSTHVILRRADAIGVRGSGNMVHHGT-VLHSPPPIACSASVS 153
            ++RDP TEVGVTP CLR L+LLSGGW+R++PA         S+TT PA        L PHD   +    +    +GLLCR +A++  S    V + G+  R        L+D E LIPPSVAFN  LGP+S HVILR A   G         HG  +LHSPP IAC+ASVS
Sbjct:   18 SIRDPFTEVGVTPRCLRRLQLLSGGWVRVYPAATTAATAAASTTTHPAFSSRSPHHLPPHDVSPRPLENQA---IGLLCRVVAVSNGS----VGDSGDDRRGGSGGVRPLADDEALIPPSVAFNAGLGPYSDHVILRWASNSGXXXXXXXXXHGAALLHSPPAIACAASVS 181
[Close]
BLAST of mRNA_H-elongata_contig75364.15219.1 vs. uniprot
Match: A0A6H5JDF2_9PHAE (AAA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDF2_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 1.120e-17
Identity = 61/124 (49.19%), Postives = 70/124 (56.45%), Query Frame = 0 
Query:   35 PASSTTSPAHRGSLEPHDGEVQANATRGAPVVGLLCRAIAITAAS-DWCEVNERGESSR---LSDGEILIPPSVAFNGRLGPFSTHVILRRADAIGVRGSGNMVHHGTVL-HSPPPIACSASVS 153
            PA S+ SP HR    PH G       +    +GLLCR +A+   S D    + RG S     L+D E LIPPSVAFN  LGP+S HVILR A   G         HGTVL HSPPPIAC+ASVS
Sbjct:    4 PAFSSRSPHHR---PPHGGSPGPLENQA---IGLLCRVVAVGNGSVDDSGDDRRGGSGSMYALADDEALIPPSVAFNAGLGPYSDHVILRWASNSGGNSGXXNSKHGTVLLHSPPPIACAASVS 121
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig75364.15219.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FLK3_ECTSI3.530e-3046.20AAA ATPase domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5JDF2_9PHAE1.120e-1749.19AAA domain-containing protein n=1 Tax=Ectocarpus s... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig75364contigH-elongata_contig75364:568..1026 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig75364.15219.1mRNA_H-elongata_contig75364.15219.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig75364 568..1028 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig75364.15219.1 ID=prot_H-elongata_contig75364.15219.1|Name=mRNA_H-elongata_contig75364.15219.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=153bp
KDERNVRDPLTEVGVTPTCLRGLKLLSGGWLRLFPASSTTSPAHRGSLEP
HDGEVQANATRGAPVVGLLCRAIAITAASDWCEVNERGESSRLSDGEILI
PPSVAFNGRLGPFSTHVILRRADAIGVRGSGNMVHHGTVLHSPPPIACSA
SVS
back to top