prot_H-elongata_contig75326.15217.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig75326.15217.1
Unique Nameprot_H-elongata_contig75326.15217.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length234
Homology
BLAST of mRNA_H-elongata_contig75326.15217.1 vs. uniprot
Match: A0A6H5KT28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT28_9PHAE)

HSP 1 Score: 385 bits (989), Expect = 5.320e-127
Identity = 195/229 (85.15%), Postives = 205/229 (89.52%), Query Frame = 0
Query:    1 PAPARRWPPPRRLVPIDSDAAKTWIYPVNYPVRNYQQQIVTAALFSNTLVALPTGLGKTLIAAVVMYNFYRWFPEGKVVFLAPTKPLVAQQISACYDIMGVPEKDTAELQGSVAPEKRRELWRDRRVFFCTPQSMVNDIKQKRCDPGRFVCVVVDEAHRGTGNYAYVNVIREVAAATPHFRVLALSATPGSDTKAIQQVLVNLRISHIECRSEDDPEVARHTHARQIEA 229
            P P+   P PR  VPID +AAKTWIYPVNYP+R YQ QIVT ALF NTLVALPTGLGKTLIAAVVMYN+YRWFPEGKVVFLAPTKPLVAQQISACY+IMGVPE+DTAELQGSV P+KR +LW +RRVFFCTPQSM NDIK KRCDP RFVCVVVDEAHRGTGNYAYVNVIREVAAAT HFRVLALSATPGSD K    VLVNLRI+HIECRSEDDPEVARHTHARQIEA
Sbjct:   85 PRPSSAKPLPR--VPIDKEAAKTWIYPVNYPIRQYQLQIVTQALFKNTLVALPTGLGKTLIAAVVMYNYYRWFPEGKVVFLAPTKPLVAQQISACYNIMGVPEQDTAELQGSVDPKKRAQLWDERRVFFCTPQSMANDIKHKRCDPARFVCVVVDEAHRGTGNYAYVNVIREVAAATSHFRVLALSATPGSDIK----VLVNLRIAHIECRSEDDPEVARHTHARQIEA 307          
BLAST of mRNA_H-elongata_contig75326.15217.1 vs. uniprot
Match: D7FP48_ECTSI (DEAD box helicase similar to CG7922-PA n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP48_ECTSI)

HSP 1 Score: 393 bits (1010), Expect = 1.220e-122
Identity = 196/228 (85.96%), Postives = 206/228 (90.35%), Query Frame = 0
Query:    1 PAPARRWPPPRRLVPIDSDAAKTWIYPVNYPVRNYQQQIVTAALFSNTLVALPTGLGKTLIAAVVMYNFYRWFPEGKVVFLAPTKPLVAQQISACYDIMGVPEKDTAELQGSVAPEKRRELWRDRRVFFCTPQSMVNDIKQKRCDPGRFVCVVVDEAHRGTGNYAYVNVIREVAAATPHFRVLALSATPGSDTKAIQQVLVNLRISHIECRSEDDPEVARHTHARQIE 228
            P P+   P PR  VPID +AA+TWIYPVNYP+R YQ QIVT ALF NTLVALPTGLGKTLIAAVVMYN+YRWFP GKVVFLAPTKPLVAQQISACYDIMGVPE+DTAELQGSV P+KR +LW +RRVFFCTPQSM NDIK KRCDP RFVCVVVDEAHRGTGNYAYVNVIREVAAAT HFRVLALSATPGSD K IQQVLVNLRI+HIECRSEDDPEVARHTHARQIE
Sbjct:   89 PRPSSAKPLPR--VPIDEEAAQTWIYPVNYPIRQYQLQIVTQALFQNTLVALPTGLGKTLIAAVVMYNYYRWFPRGKVVFLAPTKPLVAQQISACYDIMGVPEQDTAELQGSVDPKKRAQLWDERRVFFCTPQSMANDIKHKRCDPARFVCVVVDEAHRGTGNYAYVNVIREVAAATAHFRVLALSATPGSDIKTIQQVLVNLRIAHIECRSEDDPEVARHTHARQIE 314          
BLAST of mRNA_H-elongata_contig75326.15217.1 vs. uniprot
Match: A0A1V9Z2F6_9STRA (DEAD/DEAH box RNA helicase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z2F6_9STRA)

HSP 1 Score: 303 bits (777), Expect = 2.310e-94
Identity = 145/213 (68.08%), Postives = 171/213 (80.28%), Query Frame = 0
Query:   16 IDSDAAKTWIYPVNYPVRNYQQQIVTAALFSNTLVALPTGLGKTLIAAVVMYNFYRWFPEGKVVFLAPTKPLVAQQISACYDIMGVPEKDTAELQGSVAPEKRRELWRDRRVFFCTPQSMVNDIKQKRCDPGRFVCVVVDEAHRGTGNYAYVNVIREVAAATPHFRVLALSATPGSDTKAIQQVLVNLRISHIECRSEDDPEVARHTHARQIE 228
            ID D A  WIYP NYPVR YQQ I  AALF NTLV LPTGLGKTLIAAVVMYN+YRWFP GK+VF+APTKPLV+QQI AC+++M     D AELQG+VAP +R++LW ++RVFFCTPQSM ND++   CD  +FVCVVVDEAHR TGNYAYV V++ +AA    FRVLALSATPG+    IQ+V+ NLRISHIECRS DDP+V ++TH+RQ E
Sbjct:  168 IDRDLATQWIYPSNYPVRTYQQTITRAALFHNTLVCLPTGLGKTLIAAVVMYNYYRWFPTGKIVFMAPTKPLVSQQIQACHNVMPFAHSDMAELQGNVAPTRRKQLWAEKRVFFCTPQSMQNDVELGNCDVTKFVCVVVDEAHRATGNYAYVMVVKAIAAKISGFRVLALSATPGAKFDVIQEVISNLRISHIECRSGDDPDVRKYTHSRQEE 380          
BLAST of mRNA_H-elongata_contig75326.15217.1 vs. uniprot
Match: A0A067CCY2_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CCY2_SAPPC)

HSP 1 Score: 302 bits (773), Expect = 7.990e-94
Identity = 143/213 (67.14%), Postives = 169/213 (79.34%), Query Frame = 0
Query:   16 IDSDAAKTWIYPVNYPVRNYQQQIVTAALFSNTLVALPTGLGKTLIAAVVMYNFYRWFPEGKVVFLAPTKPLVAQQISACYDIMGVPEKDTAELQGSVAPEKRRELWRDRRVFFCTPQSMVNDIKQKRCDPGRFVCVVVDEAHRGTGNYAYVNVIREVAAATPHFRVLALSATPGSDTKAIQQVLVNLRISHIECRSEDDPEVARHTHARQIE 228
            ID D A  WIYP NYPVR YQQ I  AALF NTLV LPTGLGKTLIAAVVMYN+YRWFP GK+VF+APTKPLV+QQI AC+ +M +P  D AELQG+V P +R++LW  +RVFFCTPQSM NDI++  CD   FVCVVVDEAHR TGNYAY  V++ +A+    FRVLALSATPG+    IQ+V+ NLRISHIEC+S DDP+V ++TH+RQ E
Sbjct:  182 IDRDLATHWIYPSNYPVRTYQQTITRAALFQNTLVCLPTGLGKTLIAAVVMYNYYRWFPSGKIVFMAPTKPLVSQQIEACHSVMPIPHDDMAELQGNVPPARRKQLWAQKRVFFCTPQSMQNDIERGNCDVSSFVCVVVDEAHRATGNYAYTVVVKAIASKISGFRVLALSATPGAKFDVIQEVISNLRISHIECKSGDDPDVRKYTHSRQEE 394          
BLAST of mRNA_H-elongata_contig75326.15217.1 vs. uniprot
Match: A0A4W5NCS5_9TELE (Helicase ATP-binding domain-containing protein n=2 Tax=Salmonidae TaxID=8015 RepID=A0A4W5NCS5_9TELE)

HSP 1 Score: 289 bits (739), Expect = 1.140e-93
Identity = 133/213 (62.44%), Postives = 165/213 (77.46%), Query Frame = 0
Query:   16 IDSDAAKTWIYPVNYPVRNYQQQIVTAALFSNTLVALPTGLGKTLIAAVVMYNFYRWFPEGKVVFLAPTKPLVAQQISACYDIMGVPEKDTAELQGSVAPEKRRELWRDRRVFFCTPQSMVNDIKQKRCDPGRFVCVVVDEAHRGTGNYAYVNVIREVAAATPHFRVLALSATPGSDTKAIQQVLVNLRISHIECRSEDDPEVARHTHARQIE 228
            +DS +AK WIYP NYP+R+YQ +I  AALF NTLV LPTGLGKT IAAVVMYNFYRW+P GK+VF+APTKPLVAQQI ACY +MG+P+   AEL GS   ++R+ELWR RR+FF TPQ +VND+ +  C      CVV+DEAH+  GN+AY  V+R++ + T  FRVLALSATPG DTK++QQVL NL ISHIE RSE+ P++  H+H R +E
Sbjct:  147 LDSSSAKVWIYPTNYPIRDYQLKISEAALFQNTLVCLPTGLGKTFIAAVVMYNFYRWYPSGKIVFMAPTKPLVAQQIEACYKVMGIPQTHMAELTGSTQAQQRQELWRSRRIFFLTPQVLVNDLSRATCPALHVKCVVIDEAHKALGNHAYCQVVRQLGSQTQQFRVLALSATPGGDTKSVQQVLYNLLISHIELRSEESPDIQAHSHQRSLE 359          
BLAST of mRNA_H-elongata_contig75326.15217.1 vs. uniprot
Match: A0A3N0YYC0_ANAGA (Fanconi anemia group M protein n=1 Tax=Anabarilius grahami TaxID=495550 RepID=A0A3N0YYC0_ANAGA)

HSP 1 Score: 289 bits (739), Expect = 1.170e-93
Identity = 137/213 (64.32%), Postives = 159/213 (74.65%), Query Frame = 0
Query:   16 IDSDAAKTWIYPVNYPVRNYQQQIVTAALFSNTLVALPTGLGKTLIAAVVMYNFYRWFPEGKVVFLAPTKPLVAQQISACYDIMGVPEKDTAELQGSVAPEKRRELWRDRRVFFCTPQSMVNDIKQKRCDPGRFVCVVVDEAHRGTGNYAYVNVIREVAAATPHFRVLALSATPGSDTKAIQQVLVNLRISHIECRSEDDPEVARHTHARQIE 228
             D  A + WIYP NYPVR YQ QI  AAL  NTLV LPTGLGKT IAAV+MYN+YRWFP GK+VF+APTKPLVAQQI ACY +MG+P++  AEL GS A  +RRELWR RRVFF TPQ MVND+ +  C   +  CVV+DEAH+ TGN+AY  V+RE+      FRVLALSATPG D KA+QQV+ NL ISHIE RSED P+V  H H R +E
Sbjct:  155 FDPSAGRVWIYPTNYPVRQYQLQICEAALLRNTLVCLPTGLGKTFIAAVLMYNYYRWFPAGKIVFMAPTKPLVAQQIQACYGVMGIPQQHMAELTGSTAAPQRRELWRSRRVFFLTPQVMVNDLSRNTCPAAQVKCVVIDEAHKATGNHAYCQVVRELCNQMQQFRVLALSATPGGDVKAVQQVISNLLISHIELRSEDSPDVQTHVHQRSLE 367          
BLAST of mRNA_H-elongata_contig75326.15217.1 vs. uniprot
Match: A0A6G0X567_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X567_9STRA)

HSP 1 Score: 309 bits (791), Expect = 3.180e-93
Identity = 149/213 (69.95%), Postives = 171/213 (80.28%), Query Frame = 0
Query:   16 IDSDAAKTWIYPVNYPVRNYQQQIVTAALFSNTLVALPTGLGKTLIAAVVMYNFYRWFPEGKVVFLAPTKPLVAQQISACYDIMGVPEKDTAELQGSVAPEKRRELWRDRRVFFCTPQSMVNDIKQKRCDPGRFVCVVVDEAHRGTGNYAYVNVIREVAAATPHFRVLALSATPGSDTKAIQQVLVNLRISHIECRSEDDPEVARHTHARQIE 228
            ID D A  WIYP NYPVR YQQ I  AALF NTLV LPTGLGKTLIAAVVMYNFYRWFP GK+VF+APTKPLV+QQI AC+D+M +P+ D AELQG+VAP KR+ LW  +RVFFCTPQS+ NDI++  CD   FVCVVVDEAHR TGNYAYV  IR +AA    FR+LALSATPGS    IQ+V+ NLRISHIEC+S DDP+V ++TH+RQ E
Sbjct:   26 IDRDLATQWIYPSNYPVRIYQQTIARAALFQNTLVCLPTGLGKTLIAAVVMYNFYRWFPRGKIVFMAPTKPLVSQQIQACHDVMPIPQHDMAELQGNVAPAKRKLLWSTKRVFFCTPQSLQNDIERGNCDVRSFVCVVVDEAHRATGNYAYVVAIRHIAAKISGFRILALSATPGSKFDVIQEVITNLRISHIECKSGDDPDVRKYTHSRQEE 238          
BLAST of mRNA_H-elongata_contig75326.15217.1 vs. uniprot
Match: A0A3B5ANG5_9TELE (Fanconi anemia group M protein-like n=1 Tax=Stegastes partitus TaxID=144197 RepID=A0A3B5ANG5_9TELE)

HSP 1 Score: 285 bits (729), Expect = 3.310e-93
Identity = 133/218 (61.01%), Postives = 165/218 (75.69%), Query Frame = 0
Query:   11 RRLVPIDSDAAKTWIYPVNYPVRNYQQQIVTAALFSNTLVALPTGLGKTLIAAVVMYNFYRWFPEGKVVFLAPTKPLVAQQISACYDIMGVPEKDTAELQGSVAPEKRRELWRDRRVFFCTPQSMVNDIKQKRCDPGRFVCVVVDEAHRGTGNYAYVNVIREVAAATPHFRVLALSATPGSDTKAIQQVLVNLRISHIECRSEDDPEVARHTHARQIE 228
            R L   DS +AK WIYP NYP+R YQ +I  AALF NTLV LPTGLGKT IA+VVMYNFYRW+P GK+VF+APTKPLVAQQI AC+ +MG+P+   AEL GS A ++R+ELWR +RVFF TPQ M ND+ +  C   +  CVV+DEAH+  GN+AY  VIR++ + T  FRVLALSATPG DTK++Q V+ NL ISHIE RSE+ P++  H+H R +E
Sbjct:   53 RNLPGFDSSSAKVWIYPTNYPIREYQLKISEAALFQNTLVCLPTGLGKTFIASVVMYNFYRWYPSGKIVFMAPTKPLVAQQIEACFKVMGIPQAHMAELTGSTAAKQRQELWRSKRVFFLTPQVMANDLSRDTCPAQQVKCVVIDEAHKALGNHAYCQVIRQLGSQTLQFRVLALSATPGGDTKSVQAVISNLLISHIELRSEESPDIRAHSHQRSVE 270          
BLAST of mRNA_H-elongata_contig75326.15217.1 vs. uniprot
Match: A0A060WEB4_ONCMY (Helicase ATP-binding domain-containing protein n=1 Tax=Oncorhynchus mykiss TaxID=8022 RepID=A0A060WEB4_ONCMY)

HSP 1 Score: 285 bits (730), Expect = 4.290e-93
Identity = 130/213 (61.03%), Postives = 164/213 (77.00%), Query Frame = 0
Query:   16 IDSDAAKTWIYPVNYPVRNYQQQIVTAALFSNTLVALPTGLGKTLIAAVVMYNFYRWFPEGKVVFLAPTKPLVAQQISACYDIMGVPEKDTAELQGSVAPEKRRELWRDRRVFFCTPQSMVNDIKQKRCDPGRFVCVVVDEAHRGTGNYAYVNVIREVAAATPHFRVLALSATPGSDTKAIQQVLVNLRISHIECRSEDDPEVARHTHARQIE 228
            +DS +AK WIYP NYP+R+YQ +I  AALF NTLV LPTGLGKT IAAVVMYNFYRW+P GK+VF+APTKPLVAQQI ACY++MG+P+   AEL GS   + R+ELWR RR+FF TPQ +VND+ +  C      CVV+DEAH+  GN+AY  V+R++ + T  FR+LALSATPG DT ++QQV+ NL ISHIE RSE+ P++  H+H R +E
Sbjct:   73 LDSSSAKVWIYPTNYPIRDYQLKISEAALFQNTLVCLPTGLGKTFIAAVVMYNFYRWYPSGKIVFMAPTKPLVAQQIEACYNVMGIPQTHMAELTGSTQAQHRQELWRSRRIFFLTPQVLVNDLSRATCPALHVKCVVIDEAHKALGNHAYCQVVRQLGSQTQQFRILALSATPGGDTNSVQQVISNLLISHIELRSEESPDIQAHSHQRSLE 285          
BLAST of mRNA_H-elongata_contig75326.15217.1 vs. uniprot
Match: A0A2R8QLE4_DANRE (Helicase ATP-binding domain-containing protein n=1 Tax=Danio rerio TaxID=7955 RepID=A0A2R8QLE4_DANRE)

HSP 1 Score: 283 bits (725), Expect = 6.130e-93
Identity = 134/213 (62.91%), Postives = 159/213 (74.65%), Query Frame = 0
Query:   16 IDSDAAKTWIYPVNYPVRNYQQQIVTAALFSNTLVALPTGLGKTLIAAVVMYNFYRWFPEGKVVFLAPTKPLVAQQISACYDIMGVPEKDTAELQGSVAPEKRRELWRDRRVFFCTPQSMVNDIKQKRCDPGRFVCVVVDEAHRGTGNYAYVNVIREVAAATPHFRVLALSATPGSDTKAIQQVLVNLRISHIECRSEDDPEVARHTHARQIE 228
             D  A + WIYP N P+R YQ ++  AAL  NTLV LPTGLGKT IA+V+MYN+YRWFP GK+VF+APTKPLVAQQI ACY +MG+P++ TAEL GS A  +RR LW  RRVFF TPQ MVND+ +  C   +  CVV+DEAH+ TGN+AY  VIRE+   TP FRVLALSATPG D KA+QQV+ NL ISHIE RSED P+V  H H R +E
Sbjct:   13 FDYSAGRVWIYPTNLPLREYQLRVCEAALLQNTLVCLPTGLGKTFIASVLMYNYYRWFPAGKIVFMAPTKPLVAQQIEACYRVMGIPQEHTAELTGSTAAPQRRSLWSSRRVFFLTPQVMVNDLCRNTCPAAQVRCVVIDEAHKATGNHAYCQVIRELRKQTPQFRVLALSATPGGDVKAVQQVISNLLISHIELRSEDSPDVQTHVHQRSLE 225          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig75326.15217.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KT28_9PHAE5.320e-12785.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FP48_ECTSI1.220e-12285.96DEAD box helicase similar to CG7922-PA n=1 Tax=Ect... [more]
A0A1V9Z2F6_9STRA2.310e-9468.08DEAD/DEAH box RNA helicase n=1 Tax=Achlya hypogyna... [more]
A0A067CCY2_SAPPC7.990e-9467.14Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
A0A4W5NCS5_9TELE1.140e-9362.44Helicase ATP-binding domain-containing protein n=2... [more]
A0A3N0YYC0_ANAGA1.170e-9364.32Fanconi anemia group M protein n=1 Tax=Anabarilius... [more]
A0A6G0X567_9STRA3.180e-9369.95Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A3B5ANG5_9TELE3.310e-9361.01Fanconi anemia group M protein-like n=1 Tax=Stegas... [more]
A0A060WEB4_ONCMY4.290e-9361.03Helicase ATP-binding domain-containing protein n=1... [more]
A0A2R8QLE4_DANRE6.130e-9362.91Helicase ATP-binding domain-containing protein n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 28..221
e-value: 1.5E-26
score: 104.2
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 39..207
score: 22.072
NoneNo IPR availableGENE3D3.40.50.300coord: 28..222
e-value: 2.6E-58
score: 198.7
NoneNo IPR availablePANTHERPTHR14025FAMILY NOT NAMEDcoord: 8..228
IPR006935Helicase/UvrB, N-terminalPFAMPF04851ResIIIcoord: 31..189
e-value: 5.0E-25
score: 88.5
IPR039686FANCM/Mph1-likePANTHERPTHR14025:SF20FANCONI ANEMIA GROUP M PROTEINcoord: 8..228
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 15..200

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig75326contigH-elongata_contig75326:902..2493 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig75326.15217.1mRNA_H-elongata_contig75326.15217.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig75326 902..2493 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig75326.15217.1 ID=prot_H-elongata_contig75326.15217.1|Name=mRNA_H-elongata_contig75326.15217.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=234bp
PAPARRWPPPRRLVPIDSDAAKTWIYPVNYPVRNYQQQIVTAALFSNTLV
ALPTGLGKTLIAAVVMYNFYRWFPEGKVVFLAPTKPLVAQQISACYDIMG
VPEKDTAELQGSVAPEKRRELWRDRRVFFCTPQSMVNDIKQKRCDPGRFV
CVVVDEAHRGTGNYAYVNVIREVAAATPHFRVLALSATPGSDTKAIQQVL
VNLRISHIECRSEDDPEVARHTHARQIEARLPRL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR006935Helicase/UvrB_N
IPR039686FANCM/Mph1-like
IPR027417P-loop_NTPase