mRNA_H-elongata_contig7532.15216.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig7532.15216.1
Unique NamemRNA_H-elongata_contig7532.15216.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig7532.15216.1 vs. uniprot
Match: A0A6H5JTW3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTW3_9PHAE)

HSP 1 Score: 270 bits (689), Expect = 1.690e-78
Identity = 186/424 (43.87%), Postives = 227/424 (53.54%), Query Frame = 1 
Query:  364 AEWAGWECKFSGVDGKRVAVPEDYVPESLREWDVEVWGFETLTSEQV--KQGPGER-------EQLYRKRARVFPEVGCALDNLSLEVNVQTLQLDEEGMFFGT--------SADGSYVLGKKP-DGSRCLRVEAGLVVPGRDFGDVFQPQNAETRDVKEQS---------------RVRVEYRVETTDGEGREEL----------TGCLGSTITVTRERVYRPGFDDGLLYKGGGLDAQQLRGLLCSDCFGEEEAAPTVAALAGEWRCGPGTWSVSGVTSHVTCHHPKKSSDPRLERIFNG-----DATGGGIGCLLMRGGVIVRAGPWRF------DSDYGEQCWGAAAAAASRARSLAGLGGGVD-KGGRLWAVEVGWLL---GDG------AQMRREVSTMIFELATMEVVGAWRGKEER 1443
            AEWAGWEC+FSG DG+ VAVPEDYVPESLREWDV  WGFETLTSEQ+  K+  G++       + LYRKR RVFPE GCALDNLSLEVN +T  L+ + +F  +        S+ G +++ ++P  GS  L++E GL+VPG  F D     +       EQS               R RVE RV   DG                   LG  +TVTRER YR  FDDGLLYKGGGLD+Q+LRGLL S CF E E +PT   LAG W  GPG W +          H    S PR     +G     D    GI  LL+ GG+ VR+GPW         S   E+ WGAA AA      LAG   G   +    WAVEVGW +   G+G      ++ +REV T + +  T   +GAWRG E R
Sbjct:   68 AEWAGWECRFSGADGRPVAVPEDYVPESLREWDV--WGFETLTSEQLRKKEDQGDKNGGGSCTDLLYRKRGRVFPETGCALDNLSLEVNARTSPLEGDDVFVASFPVEGSSSSSAGGHIMAQQPVAGSPSLQLEVGLLVPGVQFTDPSMSASTPAVQDGEQSAAXXXXXXDGGQECSRARVEVRV---DGXXXXXXXXXXXXXGGAAATLGPIVTVTRERRYRNDFDDGLLYKGGGLDSQKLRGLLRSKCFAECEESPTTDDLAGNWVSGPGHWQLFRT-------HAAGGSAPRACTPTDGGGVAFDRETAGIKTLLLPGGITVRSGPWLGAAAADGTSSAPEKRWGAAGAA------LAGETAGFPTEEAEPWAVEVGWFVVEDGEGGASAAISREKREVLTTVVDARTTTPLGAWRGAERR 473
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BLAST of mRNA_H-elongata_contig7532.15216.1 vs. uniprot
Match: D8LLB7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLB7_ECTSI)

HSP 1 Score: 196 bits (499), Expect = 1.000e-52
Identity = 144/358 (40.22%), Postives = 177/358 (49.44%), Query Frame = 1 
Query:  532 LYRKRARVFPEVGCALDNLSLEVNVQTLQLDEEGMFFGT--------SADGSYVLGKKPD-GSRCLRVEAGLVVPGRDFGDVFQPQNAETRDV--------------------KEQSRVRVEYRVETTDGEGREEL---------TGCLGSTITVTRERVYRPGFDDGLLYKGGGLDAQQLRGLLCSDCFGEEEAAPTVAALAGEWRCGPGTWSVSGVTSHVTCHHPKKSSDPRLERIFNGDATGGGIGCLLMRGGVIVRAGPWRF------DSDYGEQCWGAAAAAASRARSLAGLGGGVD-KGGRLWAVEVGWLLGDGAQ---------MRREVSTMIFELATMEVVGAWRGKEER 1443
            LYRKR RVFPE GCALDNLSLEVN  T  L+   +F  +        S+ G +++ K+P  GS  L++E GL+VPG  F D     +A T  V                    +E SR RVE RV   DG                  LG  +TVTRER YR  FDDGLLYKGGGLD+Q+LRGLL S CF E E +PT   LAG W  GPG W +    +H       ++  P        D    GI  LL+ GG+ VR+GPW         S   E+ WGAA AA      LAG   G   +    WAVEVGW + +G +          +REV T + +  TM  +GAWRG E R
Sbjct:   11 LYRKRGRVFPETGCALDNLSLEVNALTSPLEGGDVFVASFPVEGSSSSSGGGHIVAKQPAAGSPSLQLEVGLLVPGAQFTD--PSMSASTPAVEDGEKSAAXXXXXXXXXDGGRECSRARVEVRV---DGXXXXXXXXXXXXXXXAAALGPIVTVTRERKYRDDFDDGLLYKGGGLDSQKLRGLLRSKCFAEYEESPTTDDLAGNWVSGPGHWQL--FRTHAAGGSAPRACAPTGGGGATFDRETAGIKTLLLPGGITVRSGPWLGAAAADGTSSAPEKRWGAAGAA------LAGETAGFPTEEAEPWAVEVGWFVVEGGEGGASAAISREKREVLTTVVDARTMTPLGAWRGDERR 355
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BLAST of mRNA_H-elongata_contig7532.15216.1 vs. uniprot
Match: A0A836C8Z5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8Z5_9STRA)

HSP 1 Score: 149 bits (376), Expect = 5.670e-36
Identity = 109/299 (36.45%), Postives = 148/299 (49.50%), Query Frame = 1 
Query:  319 TSTATAFRAAALV--GPAEWAGWECKFSGVDGKRVAVPEDYVPESLREWDVEVWGFETLTSEQVKQGPGEREQLYRKRARVFPEVGCALDNLSLEVNVQTLQLDEEGMFFGTSADGSYVLGKKPDGSRCLRVEAGLVVPGRDFGDVFQPQNAETRDVKEQSRVRVEYRVETTDGEGREELTGCLGSTITVTRERVYRPGFDDGLLYKGGGLDAQQLRGLLCSDCFGEEEAAPTVAALAGEWRCGPGTWSVSGVTSHVTCHHPKKSSDPRLERIFNGDATGGGIGCLLMRGGVIVRAGPW 1209
            T+T++A RA ++      EWAGWEC+FS V G+R+++PEDY+PESLREWDV VWGFE L SE++  G G  E LYR+RA+V+PE GCALD+LSLE+   T+ L        T  D +++  + P+G+    ++         FG     +         Q RVR+   + T D   R      +   +TV  ER Y   FDDG LY  G LD + L   L + CF E E AP                 V+    +   +HP     P    +  G         L +RGGV VRA  W
Sbjct:   33 TTTSSASRACSMKVDTSGEWAGWECRFSQVSGQRMSIPEDYIPESLREWDVPVWGFEVLHSERLTTGAGNAE-LYRRRAQVYPETGCALDHLSLEMRAATIPL--------TPPDATFL--ELPEGNGFALIQKA------PFGGSHTLELVAVSSSDAQRRVRL---LATVDVAKR-----AITRPLTVAVERCYAS-FDDGALYTHG-LDIKTLTETLGAKCFAEYEEAPE---------------GVAADVHYALAYHP-----PLAHAVIAGADV-----ALALRGGVTVRAASW 279
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BLAST of mRNA_H-elongata_contig7532.15216.1 vs. uniprot
Match: A0A5J4YVA8_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YVA8_PORPP)

HSP 1 Score: 65.1 bits (157), Expect = 2.600e-7
Identity = 39/111 (35.14%), Postives = 56/111 (50.45%), Query Frame = 1 
Query:  367 EWAGWECKFSGVDGKRVAVPEDYVPESLREWDVEVWGFETLTSEQVKQGPGEREQLYRKRARVFPEVGCALDNLSLEVN----------VQTLQLDEEGMFFGTS-ADGSY 666
            E+ G+E  FS   G   ++PE  +P++ R WD+E+ GF+ LTS +V      +  L  KR R+ P VGC  D ++ EV            +  Q DE G  F    ADGS+
Sbjct:  127 EFVGYEVTFSARTGAPQSIPERLIPDAFRTWDIELLGFDALTSSRVDVDSDGKSCLQLKRTRMLPAVGCEADAVATEVTDSMFRLVGSGTRDQQTDEAGAPFCVPFADGSF 237
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BLAST of mRNA_H-elongata_contig7532.15216.1 vs. uniprot
Match: A0A7S2UYG3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYG3_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 4.690e-6
Identity = 51/165 (30.91%), Postives = 75/165 (45.45%), Query Frame = 1 
Query:  523 REQLYRKRARVFPEVGCALDNLSLEVNVQT---LQLDEEGMFFGTSADG----------SYVLGKKPDGSRCLRVEAGLVVPGRDFGDVFQPQNAETRDVKEQSRVRVEY--RVETTDGEGREELTGCLGSTITVTRERVYRPGFDDGLLYKGGGLDAQQLRGLL 972
            R  + R RA VFP+ GCALDNL+++ +      L +  EG F   S +G           Y+       S   ++E GL++       +    N    +     R+RV    R   T G+   +L G     I V  ER+YR G+D G +Y GGGLD Q L+ ++
Sbjct:    7 RLSVERTRAFVFPDTGCALDNLTVQKSKPVPLALSVASEGSFSRASLEGHGAKVVFPGVGYIHDIVDPASNDFKLETGLMLHSLAETSLASGSNETPSEDNAWRRLRVSLSLRPPQTPGDNGWKL-GVRPMEIVV--ERLYRKGYDSGDIYNGGGLDTQTLQQMI 168
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BLAST of mRNA_H-elongata_contig7532.15216.1 vs. uniprot
Match: A0A7S0ZC52_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZC52_9RHOD)

HSP 1 Score: 58.2 bits (139), Expect = 3.250e-5
Identity = 32/106 (30.19%), Postives = 57/106 (53.77%), Query Frame = 1 
Query:  367 EWAGWECKFSGVDGKRVAVPEDYVPESLREWDVEVWGFETLTSEQVKQGPGEREQLYRKRARVFPEVGCALDNLSLEVNVQTLQLDEEGMFFGTS-ADGSYVLGKK 681
            E+ G E  FS   G+ V++PE ++P++ R W+V V G++ +TS  V     +R + + + +R+ P  GC  D +  +V+  +   D     F    +DGS+ +G K
Sbjct:   84 EFIGHEVNFSVSTGEAVSIPERFIPDAFRAWNVPVLGYDRITSTTVT----DRREFFFRLSRLLPTAGCEADAVVADVSDFSYSFDTLSDSFAVPFSDGSFSVGPK 185
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BLAST of mRNA_H-elongata_contig7532.15216.1 vs. uniprot
Match: A0A830D2J7_9LAMI (Uncharacterized protein n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830D2J7_9LAMI)

HSP 1 Score: 58.2 bits (139), Expect = 3.270e-5
Identity = 35/108 (32.41%), Postives = 52/108 (48.15%), Query Frame = 1 
Query:  367 EWAGWECKFSGVDGKRVAVPEDYVPESLREWDVEVWGFETLTSEQVKQGPGEREQ-------LYRKRARVFPEVGCALDNLSLEVNVQTLQLDEEGMFFGTSADGSYV 669
            EW G+  +F+ VDGK + +PE  VPE+ REWDV+V+ ++T       Q P  + +       L+ K  ++ P VGC  D  +    +Q         F      GSYV
Sbjct:   72 EWDGFGAEFT-VDGKPIQLPESVVPEAYREWDVQVFDWQTQCPTLATQHPNNKNKNNDCTPSLFYKNIKLLPTVGCEAD-AATTYTIQERHSHHSSAFAYQPTTGSYV 177
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7532.15216.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JTW3_9PHAE1.690e-7843.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLB7_ECTSI1.000e-5240.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C8Z5_9STRA5.670e-3636.45Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A5J4YVA8_PORPP2.600e-735.14Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7S2UYG3_9STRA4.690e-630.91Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0ZC52_9RHOD3.250e-530.19Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A830D2J7_9LAMI3.270e-532.41Uncharacterized protein n=1 Tax=Phtheirospermum ja... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7532contigH-elongata_contig7532:5244..10361 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score65.1
Seed ortholog evalue1e-07
Seed eggNOG ortholog159749.K0RB16
EggNOG OGs2EPZP@1,2ST39@2759,2XDX8@2836
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-27_002010.1
Exons7
Model size2312
Cds size1416
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931158.7885666-UTR-H-elongata_contig7532:5243..52881622931158.7885666-UTR-H-elongata_contig7532:5243..5288Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig7532 5244..5288 +
1691679722.3874571-UTR-H-elongata_contig7532:5243..52881691679722.3874571-UTR-H-elongata_contig7532:5243..5288Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig7532 5244..5288 +
1622931158.948985-UTR-H-elongata_contig7532:9510..103611622931158.948985-UTR-H-elongata_contig7532:9510..10361Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig7532 9511..10361 +
1691679722.481103-UTR-H-elongata_contig7532:9510..103611691679722.481103-UTR-H-elongata_contig7532:9510..10361Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig7532 9511..10361 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931158.809373-CDS-H-elongata_contig7532:5288..53781622931158.809373-CDS-H-elongata_contig7532:5288..5378Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7532 5289..5378 +
1691679722.397913-CDS-H-elongata_contig7532:5288..53781691679722.397913-CDS-H-elongata_contig7532:5288..5378Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7532 5289..5378 +
1622931158.8245685-CDS-H-elongata_contig7532:5868..62011622931158.8245685-CDS-H-elongata_contig7532:5868..6201Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7532 5869..6201 +
1691679722.408921-CDS-H-elongata_contig7532:5868..62011691679722.408921-CDS-H-elongata_contig7532:5868..6201Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7532 5869..6201 +
1622931158.837683-CDS-H-elongata_contig7532:6654..67791622931158.837683-CDS-H-elongata_contig7532:6654..6779Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7532 6655..6779 +
1691679722.4171524-CDS-H-elongata_contig7532:6654..67791691679722.4171524-CDS-H-elongata_contig7532:6654..6779Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7532 6655..6779 +
1622931158.8661017-CDS-H-elongata_contig7532:7426..75111622931158.8661017-CDS-H-elongata_contig7532:7426..7511Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7532 7427..7511 +
1691679722.425444-CDS-H-elongata_contig7532:7426..75111691679722.425444-CDS-H-elongata_contig7532:7426..7511Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7532 7427..7511 +
1622931158.886291-CDS-H-elongata_contig7532:7937..81931622931158.886291-CDS-H-elongata_contig7532:7937..8193Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7532 7938..8193 +
1691679722.4343238-CDS-H-elongata_contig7532:7937..81931691679722.4343238-CDS-H-elongata_contig7532:7937..8193Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7532 7938..8193 +
1622931158.9062254-CDS-H-elongata_contig7532:8317..85161622931158.9062254-CDS-H-elongata_contig7532:8317..8516Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7532 8318..8516 +
1691679722.4457228-CDS-H-elongata_contig7532:8317..85161691679722.4457228-CDS-H-elongata_contig7532:8317..8516Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7532 8318..8516 +
1622931158.9311767-CDS-H-elongata_contig7532:9182..95101622931158.9311767-CDS-H-elongata_contig7532:9182..9510Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7532 9183..9510 +
1691679722.4678278-CDS-H-elongata_contig7532:9182..95101691679722.4678278-CDS-H-elongata_contig7532:9182..9510Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7532 9183..9510 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7532.15216.1prot_H-elongata_contig7532.15216.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig7532 5289..9510 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig7532.15216.1

>prot_H-elongata_contig7532.15216.1 ID=prot_H-elongata_contig7532.15216.1|Name=mRNA_H-elongata_contig7532.15216.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=472bp
MTGSYFHAVDWNAAPLSLPPFFFVPLVTSLAQTTTVHRPQGWHGQRRAAS
AATNRIFRCIDLSTSLAAKSSTAASPLDDEGASPSSQLPPATSTATAFRA
AALVGPAEWAGWECKFSGVDGKRVAVPEDYVPESLREWDVEVWGFETLTS
EQVKQGPGEREQLYRKRARVFPEVGCALDNLSLEVNVQTLQLDEEGMFFG
TSADGSYVLGKKPDGSRCLRVEAGLVVPGRDFGDVFQPQNAETRDVKEQS
RVRVEYRVETTDGEGREELTGCLGSTITVTRERVYRPGFDDGLLYKGGGL
DAQQLRGLLCSDCFGEEEAAPTVAALAGEWRCGPGTWSVSGVTSHVTCHH
PKKSSDPRLERIFNGDATGGGIGCLLMRGGVIVRAGPWRFDSDYGEQCWG
AAAAAASRARSLAGLGGGVDKGGRLWAVEVGWLLGDGAQMRREVSTMIFE
LATMEVVGAWRGKEERLQHGL*
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mRNA from alignment at H-elongata_contig7532:5244..10361+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig7532.15216.1 ID=mRNA_H-elongata_contig7532.15216.1|Name=mRNA_H-elongata_contig7532.15216.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5118bp|location=Sequence derived from alignment at H-elongata_contig7532:5244..10361+ (Himanthalia elongata Himel1 dioecious)
CGACCTTTTCTATCACAGGGTCCGTCGACTGGACAAAAACCGACCATGAC
TGGCAGTTATTTCCACGCTGTAGACTGGAACGCGGCGCCTCTTTCACTTC
CTCCATTTTTCTTCGTGCCTCTGGTTACCTCCTTGGTGAGTAGATGACGT
TGGCGTAACGCCATCACACACTTGCCTTGCGAATGGGTGTTGATGCGTTT
GTACTTTTTCGAGTTCCATCCTGACCCGTTTCCTAGAGCAACATCAGCTA
ACGGAGGGAACAATGCTGCATGGTTGAGCTTCCTTATGATACAGTATATC
AAACATTTTACTCCCCTATCGTTGCTTCTTGCAGCGAGGCACGGGTCGTG
GTGCCGACAACATACAATCGACATTAAAAAAAATGCGGCGCAACATATCT
AATTGAAGCAGCTCGCTCCTAGAACCAACGACTGGGCAAGCCAGTTCAGC
TTTTCCAAGTGATCTTCGCGGCTGAGTGAATATCGTCCCTATCGTGAAAT
GCGGAACTATTATACTCTCTACCAGCTCATTAGGTTGTGCTCGTACAAGT
ACTTTCTATTCTTGTATCGTATATGTCTTTTCTCCACGACGGAATTCGTT
ATGGTTACCGCTGCCAATGATGAAGGCGCAGACAACGACGGTGCACCGAC
CGCAAGGGTGGCATGGACAGCGGAGAGCCGCTTCGGCTGCCACCAATCGA
ATATTTCGTTGCATTGATTTGTCTACATCATTGGCCGCAAAATCATCAAC
GGCCGCATCGCCTCTCGACGATGAGGGTGCCTCGCCCTCCTCCCAGCTAC
CCCCCGCCACCTCCACCGCCACCGCCTTTCGCGCGGCGGCGCTGGTTGGG
CCGGCGGAATGGGCCGGTTGGGAATGCAAGTTCTCCGGGGTAGACGGGAA
GCGTGTGGCCGTGCCGGAGGACTACGTGCCGGAGTCTCTCCGGGAGTGGG
ACGTGGAGGTACGGTTTTGCAGGGCAAACTAATGCGCCTATAGTGCTACA
ACTTGTGTTGCAACTTATCACATCTTGTTTACAATTGTCACTATTAATAC
CAGTAGTTGTTCCAACTGCTGCAAGACGTAAGTGGTGGCAGAGACTAACC
GTTTGCGTCGTTGGATTACTGTAGGCAGCGACTCGCCAGTCCTGTGCTGG
TATTTCGGAATGCGCAAGCGCGGCGGAGTGTGTTATCTCTGGCGAGGATT
ATATTATATATTTAGAGAGAGAAGGCAACGAAAGTGGTTCGGCCATCGTC
CGCCCGCGATCGGATGTGATAATTCCATGATTTCTCGCTAGCCGTGGAAA
AGCTAATATATACCTGGGGTATATTTGAAGAGGCAAAACGGCGGCATCTG
CCTTCGATGGAAAAGCCTTACCTTTCCCCCTCACCAACATATTTTATTCG
TTACCTGGCAGGTGTGGGGATTCGAGACTCTGACGAGCGAGCAGGTGAAG
CAAGGGCCGGGTGAGAGAGAGCAGCTCTATCGCAAGCGGGCGAGGGTGTT
TCCCGAGGTTGGCTGCGCCCTGGACAACCTATCGTTGTGAGCAAGTTGTT
TAGCACTGCGGAAATAGAGTAGGCATGTTAATGCCAAAATAGTCGTCACC
CGAGGACTCTAAAGTCTAGTGGTAACCATGTACGTTAGCTAGTAGTGCCG
AAAATAATGAGCTACACTCTTTTCGGTGTGGTTATTTTTTCTGTACAGTA
GCGGTCATAGTCTAAATCGTGAGAACGGGAGTGAGCAAAGTTCAACCAAT
CGTTGACGAGGTGTAGGGGTATTAATATGCATCGTGTAACTATTGTTTGG
CGGGAGGGCAAACGTTGAAAGACCCATCGGCAGAAACATACCGGCATATA
TATTTACACATAAAACACTACACCAAAGGTACCCTTGACTTAAACGAATA
ATGTGTTCGACGCTGGTCGGAATGGGAGGAGTTCCGTGGTTCACCGGCAG
GACTTGATAGCCGTACGTAGTAAAACGGGGAAGTATCTGCACAGCAGTAC
GGACCAAAGTGCGCCCTTACGGTTCTGACGACGATGGCGGTCTATTTTAA
CACAAGCTCCGCTGTGAGAAACCCCCTAAACCCCTGCCGTCGATCGTTGC
CACCCAGAGCATCGCAGCCTCGGTTGACCCTCAACGCCCTGCTGATTCTG
GCCCCCGTCGATTGGTGCCACGTCATCCGACAGAGAAGTTAATGTTCAGA
CGTTGCAACTTGACGAGGAGGGGATGTTCTTTGGCACGTCCGCCGACGGG
AGCTACGTCCTGGGAAAGGTGATTACGGTGCTACGAGGCAACCATATCCG
GTTGATCCATACTCTTCTTTATGTTATGAACATACACGCACGTTTGTTAC
ACTAACGCGTTTCCCCCGTGCGGGAAAGTATCGAAGGAGTTTAATTCGAG
GGGGTCCCGCCCGCCGAGGGCGCGAGCGGGTACCAAAGTATGCCCCTCGT
AGCACGCGCTGCAGCCACACCCGGCCTTACGATGGGCACAGCCGAGATCT
TCACCCGCTTACGCTGTACGGAAAGCGTGGCAGACGTCGGAGTCAAACAT
TCGTCGGAAATTCCTAACCGCACATGGTTGCGACTGCGGCTCATGAAGCT
CGAGTCATACACGCGCAAGGAGAAATTTATTTGGCTTCTAACTCTCCTTT
CCCAAAACTCGCCATCCGTATTTCCTCTGGCTGCTCTTCTCTAGAAACCC
GACGGCTCGCGCTGCTTGCGGGTGGAAGCCGGACTTGTCGTGCCTGGCAG
AGATTTTGGGGATGTGTTTCAACCGCAGAACGCTGAGACAAGGGACGTTA
AAGAGCAGTCGAGAGTCAGGGTGGAATATCGTGTCGAAACCACGGACGGC
GAAGGCCGGGAAGAGCTGACGGGCTGCCTAGGGTCGACGATAACTGTCAC
AAGGGAGCGGGTGTACCGCCCTGGGTTCGACGACGGCCTGCTGTATAAAG
GTGGGTTCCGTGGCGTTCCCTGTTCTCAATCTAGCTTGGCATCTCGACAC
AATAACGGATCGTGGAGATCGATCGCCTACTGTGGTTGCTGACGATACCC
GCTCGTCGTGCAAACGTTTCTAAGGCGGTGGCTTGGACGCCCAGCAACTT
CGCGGCCTTCTGTGCTCGGATTGCTTTGGTGAGGAAGAAGCCGCCCCAAC
CGTCGCTGCGCTAGCGGGCGAGTGGCGTTGTGGCCCGGGCACGTGGAGCG
TAAGTGGAGTGACGTCACACGTCACATGTCACCACCCAAAGAAATCGAGT
GATCCTCGCCTCGAACGAATCTTGTCGACCTCTCAATTGTTTTGGTTGTT
TCATTTCGTCAGCGCAGCGACAGAGGCAGAGAGAAAGAGAGAGAGAACAC
CGGCGTTTTCGTTCATAACGGAAAGAGGGCTGTGCAAAACAGCCACGACT
TTGTGATGAGTCCCGAGTGTTACCTCTCGCGCGAGGCGACTCTGGCACTT
GATCCGAAAGCATCTTTGTAATTGCATGCTCAGATCGCCAACCCTGACCT
GAATCCACGATAACGCTAACCCTGACCCTGACCCCAAGTCGTGTTGGGAA
ATATATAATATTGTCAAACCGTAAAGAGCCGACATTCCCCCAAGGGGTTA
AAAAGTAACTTCAAAAAGAAGATATTCTAGCCTCACTCAAAATATTACGT
GGCTTGAGATAATCCTCATCGGCGATGCGGCGACAAATAAATCAACTTCG
CCGCGATAATGGTGAGGACAGATTGCTGACTGTAGTCGGCACGACTCCTT
CTCGAGGAATACATATACTCTTTAAATATTACGAAAGAAGCGCCGCTGAA
ACCCCTGCCTTTCCGTGGACCGCGCTTGGCCACAGGACTTGCGCAGCCCC
ACGGACAAAATGTATCCATCGCAGGATCCTTTGGACGATGCACATCATCA
CCCTGTGCTACTTGAGCGACCCGAAAATTTTTGGGAGAGCAACGGCGACG
CAACCGGGGGCGGGATCGGGTGCCTGCTGATGCGCGGTGGGGTGATCGTT
AGAGCAGGGCCGTGGCGCTTTGACTCAGATTACGGGGAACAGTGCTGGGG
TGCCGCTGCGGCTGCCGCTTCGAGAGCACGATCCCTGGCGGGGCTGGGAG
GGGGTGTGGACAAGGGGGGGCGCTTGTGGGCCGTGGAAGTGGGGTGGCTA
TTGGGCGACGGGGCGCAGATGAGAAGGGAAGTCTCCACGATGATTTTCGA
ATTGGCAACCATGGAGGTGGTGGGGGCTTGGAGAGGGAAGGAAGAGAGGC
TGCAGCATGGGCTCTAAGGCTTGATCAATCTAACACTACAGGGCGAGCGG
CTACTGCTCGCGGTACTCGTCATTTCCCTTATGGTTGTTATCAGTAGTGC
AAAGGGACCGGTGGCGTTTGGACTGCGCGGAAGGGGTTTCCGTCGGCGTC
TTCTGATCCTTGTCGAGGTTGGTGTGCTTTGTTACGCGAGGCTTGCGCTT
GTATGTCATCGTTGCGCCTCTTTCTCGTCTGTAGAGAGAAATTTGAAGCC
GCCCTGCTACGACAGCAGGTGTATATATCATTGGGGGGCACATCAACTTC
GACTTAAGTGACATCAACGGAGCAACGGGCATGGAACAAAGGCTCGCACT
GATGCGATTCAGGGGACAATAAATACCATGGGGTGGCACCTTGTCGTGGA
GGGCAAGGTTCACCGCATGGTAACGGGGGTGTTGACGGAGAGCCATGCTG
AAGGCAGTGCAGATGCCTTATGATAATGGTAGCACCACGAAAGACAACCG
CAAGGTGGAACGTGTTCCAGAGGGAGGTGGCTGCAACGCGCAGTGTGACC
ACCTGATCACGCTGTGGTAAGGACGGGGGGTGGCCTTGTGAAAACAGTAG
CTTAGGTGACCATGCCGTACATCGAGGAATAATATTTTCCAATACAACAG
CGCGAAGGGCCAGAGTAGGCGCATCGTCGGTTACTGGGCACTCGAAAACA
GCCGAGGATACGCGCCTCGAATGAGCGTCCAAGGTGCTCATGGGGTTTCT
GAGTTATCCCGTAGGCGTTTGCTGCTTGTGTCGTACCTCTTGCCTTAAGA
ATGACCAAAAATGCTCATCCTGCGGCTCGGAACACAAGGAATGCAAGCGG
GCGGGTCCGTTGTCAAGG
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Coding sequence (CDS) from alignment at H-elongata_contig7532:5244..10361+

>mRNA_H-elongata_contig7532.15216.1 ID=mRNA_H-elongata_contig7532.15216.1|Name=mRNA_H-elongata_contig7532.15216.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2832bp|location=Sequence derived from alignment at H-elongata_contig7532:5244..10361+ (Himanthalia elongata Himel1 dioecious)
ATGACTGGCAGTTATTTCCACGCTGTAGACTGGAACGCGGCGCCTCTTTC
ACTTCCTCCATTTTTCTTCGTGCCTCTGGTTACCTCCTTGATGACTGGCA
GTTATTTCCACGCTGTAGACTGGAACGCGGCGCCTCTTTCACTTCCTCCA
TTTTTCTTCGTGCCTCTGGTTACCTCCTTGGCGCAGACAACGACGGTGCA
CCGACCGCAAGGGTGGCATGGACAGCGGAGAGCCGCTTCGGCTGCCACCA
ATCGAATATTTCGTTGCATTGATTTGTCTACATCATTGGCCGCAAAATCA
TCAACGGCCGCATCGCCTCTCGACGATGAGGGTGCCTCGCCCTCCTCCCA
GCTACCCCCCGCCACCTCCACCGCCACCGCCTTTCGCGCGGCGGCGCTGG
TTGGGCCGGCGGAATGGGCCGGTTGGGAATGCAAGTTCTCCGGGGTAGAC
GGGAAGCGTGTGGCCGTGCCGGAGGACTACGTGCCGGAGTCTCTCCGGGA
GTGGGACGTGGAGGCGCAGACAACGACGGTGCACCGACCGCAAGGGTGGC
ATGGACAGCGGAGAGCCGCTTCGGCTGCCACCAATCGAATATTTCGTTGC
ATTGATTTGTCTACATCATTGGCCGCAAAATCATCAACGGCCGCATCGCC
TCTCGACGATGAGGGTGCCTCGCCCTCCTCCCAGCTACCCCCCGCCACCT
CCACCGCCACCGCCTTTCGCGCGGCGGCGCTGGTTGGGCCGGCGGAATGG
GCCGGTTGGGAATGCAAGTTCTCCGGGGTAGACGGGAAGCGTGTGGCCGT
GCCGGAGGACTACGTGCCGGAGTCTCTCCGGGAGTGGGACGTGGAGGTGT
GGGGATTCGAGACTCTGACGAGCGAGCAGGTGAAGCAAGGGCCGGGTGAG
AGAGAGCAGCTCTATCGCAAGCGGGCGAGGGTGTTTCCCGAGGTTGGCTG
CGCCCTGGACAACCTATCGTTGTGTGGGGATTCGAGACTCTGACGAGCGA
GCAGGTGAAGCAAGGGCCGGGTGAGAGAGAGCAGCTCTATCGCAAGCGGG
CGAGGGTGTTTCCCGAGGTTGGCTGCGCCCTGGACAACCTATCGTTAGAA
GTTAATGTTCAGACGTTGCAACTTGACGAGGAGGGGATGTTCTTTGGCAC
GTCCGCCGACGGGAGCTACGTCCTGGGAAAGAGAAGTTAATGTTCAGACG
TTGCAACTTGACGAGGAGGGGATGTTCTTTGGCACGTCCGCCGACGGGAG
CTACGTCCTGGGAAAGAAACCCGACGGCTCGCGCTGCTTGCGGGTGGAAG
CCGGACTTGTCGTGCCTGGCAGAGATTTTGGGGATGTGTTTCAACCGCAG
AACGCTGAGACAAGGGACGTTAAAGAGCAGTCGAGAGTCAGGGTGGAATA
TCGTGTCGAAACCACGGACGGCGAAGGCCGGGAAGAGCTGACGGGCTGCC
TAGGGTCGACGATAACTGTCACAAGGGAGCGGGTGTACCGCCCTGGGTTC
GACGACGGCCTGCTGTATAAAGAAACCCGACGGCTCGCGCTGCTTGCGGG
TGGAAGCCGGACTTGTCGTGCCTGGCAGAGATTTTGGGGATGTGTTTCAA
CCGCAGAACGCTGAGACAAGGGACGTTAAAGAGCAGTCGAGAGTCAGGGT
GGAATATCGTGTCGAAACCACGGACGGCGAAGGCCGGGAAGAGCTGACGG
GCTGCCTAGGGTCGACGATAACTGTCACAAGGGAGCGGGTGTACCGCCCT
GGGTTCGACGACGGCCTGCTGTATAAAGGCGGTGGCTTGGACGCCCAGCA
ACTTCGCGGCCTTCTGTGCTCGGATTGCTTTGGTGAGGAAGAAGCCGCCC
CAACCGTCGCTGCGCTAGCGGGCGAGTGGCGTTGTGGCCCGGGCACGTGG
AGCGTAAGTGGAGTGACGTCACACGTCACATGTCACCACCCAAAGAAATC
GAGTGATCCTCGCCTCGAACGAATCTTGCGGTGGCTTGGACGCCCAGCAA
CTTCGCGGCCTTCTGTGCTCGGATTGCTTTGGTGAGGAAGAAGCCGCCCC
AACCGTCGCTGCGCTAGCGGGCGAGTGGCGTTGTGGCCCGGGCACGTGGA
GCGTAAGTGGAGTGACGTCACACGTCACATGTCACCACCCAAAGAAATCG
AGTGATCCTCGCCTCGAACGAATCTTCAACGGCGACGCAACCGGGGGCGG
GATCGGGTGCCTGCTGATGCGCGGTGGGGTGATCGTTAGAGCAGGGCCGT
GGCGCTTTGACTCAGATTACGGGGAACAGTGCTGGGGTGCCGCTGCGGCT
GCCGCTTCGAGAGCACGATCCCTGGCGGGGCTGGGAGGGGGTGTGGACAA
GGGGGGGCGCTTGTGGGCCGTGGAAGTGGGGTGGCTATTGGGCGACGGGG
CGCAGATGAGAAGGGAAGTCTCCACGATGATTTTCGAATTGGCAACCATG
GAGGTGGTGGGGGCTTGGAGAGGGAAGGAAGAGAGGCTGCAGCATGGGCT
CTAACAACGGCGACGCAACCGGGGGCGGGATCGGGTGCCTGCTGATGCGC
GGTGGGGTGATCGTTAGAGCAGGGCCGTGGCGCTTTGACTCAGATTACGG
GGAACAGTGCTGGGGTGCCGCTGCGGCTGCCGCTTCGAGAGCACGATCCC
TGGCGGGGCTGGGAGGGGGTGTGGACAAGGGGGGGCGCTTGTGGGCCGTG
GAAGTGGGGTGGCTATTGGGCGACGGGGCGCAGATGAGAAGGGAAGTCTC
CACGATGATTTTCGAATTGGCAACCATGGAGGTGGTGGGGGCTTGGAGAG
GGAAGGAAGAGAGGCTGCAGCATGGGCTCTAA
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