prot_H-elongata_contig75248.15208.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig75248.15208.1
Unique Nameprot_H-elongata_contig75248.15208.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length75
Homology
BLAST of mRNA_H-elongata_contig75248.15208.1 vs. uniprot
Match: D8LG75_ECTSI (HELICc2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG75_ECTSI)

HSP 1 Score: 124 bits (312), Expect = 2.070e-32
Identity = 59/65 (90.77%), Postives = 63/65 (96.92%), Query Frame = 0
Query:    3 QASRAVNQAIGRVIRHRRDYGCVVLCDSRFADERNRQSLSLWARPFVRECSSFGKVAADLTRFFK 67
            QASRAVNQAIGRVIRHR DYGCVVLCDSRFA++RNR+SLSLWARPFVRECS FGKVAADLT+FFK
Sbjct:  149 QASRAVNQAIGRVIRHRLDYGCVVLCDSRFAEDRNRKSLSLWARPFVRECSGFGKVAADLTKFFK 213          
BLAST of mRNA_H-elongata_contig75248.15208.1 vs. uniprot
Match: A0A6H5KW94_9PHAE (HELICc2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW94_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 1.610e-31
Identity = 59/65 (90.77%), Postives = 63/65 (96.92%), Query Frame = 0
Query:    3 QASRAVNQAIGRVIRHRRDYGCVVLCDSRFADERNRQSLSLWARPFVRECSSFGKVAADLTRFFK 67
            QASRAVNQAIGRVIRHR DYGCVVLCDSRFA++RNR+SLSLWARPFVRECS FGKVAADLT+FFK
Sbjct:  222 QASRAVNQAIGRVIRHRLDYGCVVLCDSRFAEDRNRKSLSLWARPFVRECSGFGKVAADLTKFFK 286          
BLAST of mRNA_H-elongata_contig75248.15208.1 vs. uniprot
Match: A0A835IFC1_9MAGN (Helicase ATP-binding domain-containing protein n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835IFC1_9MAGN)

HSP 1 Score: 89.4 bits (220), Expect = 4.380e-19
Identity = 38/68 (55.88%), Postives = 54/68 (79.41%), Query Frame = 0
Query:    3 QASRAVNQAIGRVIRHRRDYGCVVLCDSRFADERNRQSLSLWARPFVRECSSFGKVAADLTRFFKVLL 70
            QASRAVNQA+GRVIRHR DYG ++ CD RF+  +N+  +S+W +P+++  S+FG+VA  LTRFF+ +L
Sbjct:  628 QASRAVNQAVGRVIRHRHDYGAIIFCDERFSHAKNQHQMSIWLQPYIKCYSNFGEVAFTLTRFFRDIL 695          
BLAST of mRNA_H-elongata_contig75248.15208.1 vs. uniprot
Match: A0A1X7U2G6_AMPQE (HELICc2 domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7U2G6_AMPQE)

HSP 1 Score: 84.0 bits (206), Expect = 7.780e-19
Identity = 38/66 (57.58%), Postives = 47/66 (71.21%), Query Frame = 0
Query:    3 QASRAVNQAIGRVIRHRRDYGCVVLCDSRFADERNRQSLSLWARPFVRECSSFGKVAADLTRFFKV 68
            QA+RAVNQAIGRVIRH+ DYG ++LCD RFA  R +  L LW RP +++   FG    DLT FFK+
Sbjct:   30 QATRAVNQAIGRVIRHKNDYGAIILCDERFAYSRGQDDLPLWLRPQLQKYDKFGPAQRDLTSFFKI 95          
BLAST of mRNA_H-elongata_contig75248.15208.1 vs. uniprot
Match: A0A433Q1I5_9FUNG (HELICc2 domain-containing protein n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433Q1I5_9FUNG)

HSP 1 Score: 85.9 bits (211), Expect = 9.040e-19
Identity = 40/69 (57.97%), Postives = 50/69 (72.46%), Query Frame = 0
Query:    3 QASRAVNQAIGRVIRHRRDYGCVVLCDSRFADERNRQSLSLWARPFVRECSSFGKVAADLTRFFKVLLS 71
            QA RAVNQAIGRVIRHR+DYG ++LCD RFA       LS W RPFV+ C++FG+    +T+FFK + S
Sbjct:  126 QAIRAVNQAIGRVIRHRKDYGAILLCDERFASPAIISQLSGWVRPFVKVCNNFGEAQGQVTKFFKSIES 194          
BLAST of mRNA_H-elongata_contig75248.15208.1 vs. uniprot
Match: A0A6A4W3C5_AMPAM (Regulator of telomere elongation helicase 1 homolog n=3 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4W3C5_AMPAM)

HSP 1 Score: 88.2 bits (217), Expect = 1.110e-18
Identity = 41/65 (63.08%), Postives = 50/65 (76.92%), Query Frame = 0
Query:    3 QASRAVNQAIGRVIRHRRDYGCVVLCDSRFADERNRQSLSLWARPFVRECSSFGKVAADLTRFFK 67
            +ASRAVNQA+GRVIRHRRDYG V+LCDSRF D      LS W RP++R  ++FG V  +LT+FFK
Sbjct:  690 EASRAVNQAVGRVIRHRRDYGAVILCDSRFGDAGFSGQLSAWVRPYLRVHANFGTVVRELTQFFK 754          
BLAST of mRNA_H-elongata_contig75248.15208.1 vs. uniprot
Match: A0A4W5JXI1_9TELE (HELICc2 domain-containing protein n=1 Tax=Hucho hucho TaxID=62062 RepID=A0A4W5JXI1_9TELE)

HSP 1 Score: 82.0 bits (201), Expect = 1.570e-18
Identity = 39/66 (59.09%), Postives = 45/66 (68.18%), Query Frame = 0
Query:    3 QASRAVNQAIGRVIRHRRDYGCVVLCDSRFADERNRQSLSLWARPFVRECSSFGKVAADLTRFFKV 68
            QASRAVNQAIGRVIRHR DYG + LCD RF     R  L  W RP+VR   +FG V  D+ +FF+V
Sbjct:   35 QASRAVNQAIGRVIRHRDDYGAIFLCDHRFKSTDARAQLPSWVRPYVRTYDNFGNVVRDVAQFFRV 100          
BLAST of mRNA_H-elongata_contig75248.15208.1 vs. uniprot
Match: A0A507C178_9FUNG (Helicase ATP-binding domain-containing protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507C178_9FUNG)

HSP 1 Score: 87.0 bits (214), Expect = 2.830e-18
Identity = 40/65 (61.54%), Postives = 49/65 (75.38%), Query Frame = 0
Query:    3 QASRAVNQAIGRVIRHRRDYGCVVLCDSRFADERNRQSLSLWARPFVRECSSFGKVAADLTRFFK 67
            QA RAVNQAIGRVIRHRRDYG ++L D RFA  +N + L LW RP+V+  S+FG+   DL +FFK
Sbjct:  711 QAVRAVNQAIGRVIRHRRDYGAIILADERFAQPQNIKQLPLWVRPYVKVASNFGQAQMDLIKFFK 775          
BLAST of mRNA_H-elongata_contig75248.15208.1 vs. uniprot
Match: UPI000BA816EE (regulator of telomere elongation helicase 1 homolog isoform X1 n=2 Tax=Limulus polyphemus TaxID=6850 RepID=UPI000BA816EE)

HSP 1 Score: 87.0 bits (214), Expect = 2.840e-18
Identity = 40/65 (61.54%), Postives = 51/65 (78.46%), Query Frame = 0
Query:    3 QASRAVNQAIGRVIRHRRDYGCVVLCDSRFADERNRQSLSLWARPFVRECSSFGKVAADLTRFFK 67
            QASRAVNQA+GRVIRHR+DYG V+LCD+RFA++R    LSLW R  V+  ++FG    DL++FFK
Sbjct:  649 QASRAVNQAVGRVIRHRKDYGAVLLCDNRFAEKRINSQLSLWVRDRVKSYTTFGPALRDLSKFFK 713          
BLAST of mRNA_H-elongata_contig75248.15208.1 vs. uniprot
Match: D8RJV6_SELML (DNA helicase (Fragment) n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RJV6_SELML)

HSP 1 Score: 86.3 bits (212), Expect = 5.250e-18
Identity = 41/65 (63.08%), Postives = 47/65 (72.31%), Query Frame = 0
Query:    3 QASRAVNQAIGRVIRHRRDYGCVVLCDSRFADERNRQSLSLWARPFVRECSSFGKVAADLTRFFK 67
            QASRAVNQA+GRVIRH+ DYG ++LCD RFA    +  LSLW RP V+  S FG  A  LTRFFK
Sbjct:  651 QASRAVNQAVGRVIRHKNDYGAIILCDERFAQAGAQSQLSLWLRPHVKLYSKFGDAAFTLTRFFK 715          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig75248.15208.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LG75_ECTSI2.070e-3290.77HELICc2 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5KW94_9PHAE1.610e-3190.77HELICc2 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835IFC1_9MAGN4.380e-1955.88Helicase ATP-binding domain-containing protein n=1... [more]
A0A1X7U2G6_AMPQE7.780e-1957.58HELICc2 domain-containing protein n=1 Tax=Amphimed... [more]
A0A433Q1I5_9FUNG9.040e-1957.97HELICc2 domain-containing protein n=1 Tax=Jimgerde... [more]
A0A6A4W3C5_AMPAM1.110e-1863.08Regulator of telomere elongation helicase 1 homolo... [more]
A0A4W5JXI1_9TELE1.570e-1859.09HELICc2 domain-containing protein n=1 Tax=Hucho hu... [more]
A0A507C178_9FUNG2.830e-1861.54Helicase ATP-binding domain-containing protein n=1... [more]
UPI000BA816EE2.840e-1861.54regulator of telomere elongation helicase 1 homolo... [more]
D8RJV6_SELML5.250e-1863.08DNA helicase (Fragment) n=4 Tax=Selaginella moelle... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006555ATP-dependent helicase, C-terminalPFAMPF13307Helicase_C_2coord: 2..47
e-value: 1.1E-16
score: 61.5
NoneNo IPR availableGENE3D3.40.50.300coord: 1..50
e-value: 4.5E-15
score: 57.7
NoneNo IPR availablePANTHERPTHR11472DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBERcoord: 2..68
NoneNo IPR availablePANTHERPTHR11472:SF34REGULATOR OF TELOMERE ELONGATION HELICASE 1coord: 2..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig75248contigH-elongata_contig75248:1569..1793 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig75248.15208.1mRNA_H-elongata_contig75248.15208.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig75248 1569..2008 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig75248.15208.1 ID=prot_H-elongata_contig75248.15208.1|Name=mRNA_H-elongata_contig75248.15208.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=75bp
ASQASRAVNQAIGRVIRHRRDYGCVVLCDSRFADERNRQSLSLWARPFVR
ECSSFGKVAADLTRFFKVLLSRVM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006555ATP-dep_Helicase_C