mRNA_H-elongata_contig75236.15207.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig75236.15207.1
Unique NamemRNA_H-elongata_contig75236.15207.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
[Close]
BLAST of mRNA_H-elongata_contig75236.15207.1 vs. uniprot
Match: A0A097IUF9_9PHAE (Malic enzyme n=7 Tax=Sargassum TaxID=3015 RepID=A0A097IUF9_9PHAE)

HSP 1 Score: 338 bits (867), Expect = 1.060e-111
Identity = 163/180 (90.56%), Postives = 171/180 (95.00%), Query Frame = 1 
Query:    1 AGVHPSYCLPVTLDVGTNNQDKINDPFYIGLKRDRLRGPEYDAFVGEFIEAAVDKYGKSVMLQFEDFGNSNAFRLLHHWQEKVCCFNDDIQGTAAVALAGILASTALTGIPVENHRFLFMGAGEAGAGIAELIAYAIKVETGKTIEECRKQIFMLDSKGLVCRSRLEELQHHKRDFAHDT 540
            AGVHPS+CLPVTLDVGTNNQ K++DP+YIGLK  RL GPEYDAFVGEF+EAAVDKYG+SVMLQFEDFGN+NAFRLLHHWQEKVCCFNDDIQGTAAVALAGILASTALTGI VE HRFLFMGAGEAGAGIAELIAYAIKVETGKTIEECRKQIFM+DSKGLVC SRLE LQHHKRDFAHD 
Sbjct:  191 AGVHPSHCLPVTLDVGTNNQAKLDDPYYIGLKHRRLTGPEYDAFVGEFMEAAVDKYGESVMLQFEDFGNNNAFRLLHHWQEKVCCFNDDIQGTAAVALAGILASTALTGIRVETHRFLFMGAGEAGAGIAELIAYAIKVETGKTIEECRKQIFMVDSKGLVCLSRLEGLQHHKRDFAHDV 370
[Close]
BLAST of mRNA_H-elongata_contig75236.15207.1 vs. uniprot
Match: A0A097IUJ6_9PHAE (Malic enzyme n=1 Tax=Desmarestia viridis TaxID=62313 RepID=A0A097IUJ6_9PHAE)

HSP 1 Score: 328 bits (840), Expect = 1.270e-107
Identity = 157/180 (87.22%), Postives = 167/180 (92.78%), Query Frame = 1 
Query:    1 AGVHPSYCLPVTLDVGTNNQDKINDPFYIGLKRDRLRGPEYDAFVGEFIEAAVDKYGKSVMLQFEDFGNSNAFRLLHHWQEKVCCFNDDIQGTAAVALAGILASTALTGIPVENHRFLFMGAGEAGAGIAELIAYAIKVETGKTIEECRKQIFMLDSKGLVCRSRLEELQHHKRDFAHDT 540
            AGV PS+CLPVTLDVGTNNQ K+NDPFYIG KR RL G +YDAFVGEFIEAAVDKYGKSVMLQFEDFGNSNAFRLLHHWQEKVCCFNDDIQGTAAVALAGIL STALTG  VENHRFLF+GAGEAGAGIAELIAYAI +ETGK++EECRKQIFM+DSKGLVC+SRL ELQHHK +FAHD 
Sbjct:  192 AGVDPSHCLPVTLDVGTNNQGKLNDPFYIGHKRRRLIGADYDAFVGEFIEAAVDKYGKSVMLQFEDFGNSNAFRLLHHWQEKVCCFNDDIQGTAAVALAGILGSTALTGTAVENHRFLFLGAGEAGAGIAELIAYAIHIETGKSVEECRKQIFMIDSKGLVCKSRLHELQHHKLNFAHDV 371
[Close]
BLAST of mRNA_H-elongata_contig75236.15207.1 vs. uniprot
Match: A0A097IUJ0_9PHAE (Malic enzyme n=3 Tax=Ectocarpales TaxID=2877 RepID=A0A097IUJ0_9PHAE)

HSP 1 Score: 328 bits (841), Expect = 1.650e-107
Identity = 157/180 (87.22%), Postives = 166/180 (92.22%), Query Frame = 1 
Query:    1 AGVHPSYCLPVTLDVGTNNQDKINDPFYIGLKRDRLRGPEYDAFVGEFIEAAVDKYGKSVMLQFEDFGNSNAFRLLHHWQEKVCCFNDDIQGTAAVALAGILASTALTGIPVENHRFLFMGAGEAGAGIAELIAYAIKVETGKTIEECRKQIFMLDSKGLVCRSRLEELQHHKRDFAHDT 540
            AGVHPS+CLPV LDVGTN QDK++DPFYIGLKR RL G EYDAFV EFIEAAVDKYGKSVMLQFEDFGNSNAFRLLHHWQEKVCCFNDDIQGTAAVALAG+L STALTG  VE+HRFLF GAGEAGAGIAELIAYAI VETGK +EECRKQ+FMLDSKGLVC+SRL ELQHHK +FAHDT
Sbjct:  214 AGVHPSHCLPVALDVGTNTQDKLDDPFYIGLKRRRLTGREYDAFVAEFIEAAVDKYGKSVMLQFEDFGNSNAFRLLHHWQEKVCCFNDDIQGTAAVALAGVLGSTALTGTAVEDHRFLFFGAGEAGAGIAELIAYAIHVETGKPVEECRKQVFMLDSKGLVCKSRLHELQHHKINFAHDT 393
[Close]
BLAST of mRNA_H-elongata_contig75236.15207.1 vs. uniprot
Match: A0A097IUJ3_UNDPI (Malic enzyme n=3 Tax=Laminariales TaxID=2886 RepID=A0A097IUJ3_UNDPI)

HSP 1 Score: 321 bits (823), Expect = 4.860e-105
Identity = 155/181 (85.64%), Postives = 166/181 (91.71%), Query Frame = 1 
Query:    1 AGVHPSYCLPVTLDVGTNNQDKINDPFYIGLKRDRLRGPEYDAFVGEFIEAAVDKYGKSVMLQFEDFGNSNAFRLLHHWQEKVCCFNDDIQGTAAVALAGILASTALTGIPVENHRFLFMGAGEAGAGIAELIAYAIKVETGKTIEECRKQIFMLDSKGLVCRSRLEELQHHKRDFAHDTG 543
            AGV+P+ CLPVTLDVGTNNQ K++DPFYIG KR R+ G +YDAFVGEFIEAAVDKYGKSVMLQFEDFGNSNAFRLL+HWQEKVCCFNDDIQGTAAVALAGIL STALTG  VE+HRFLF+GAGEAGAGIAELIAYAI VETGK +EECRKQIFMLDSKGLVC+SRL ELQHHK  FAHD G
Sbjct:  194 AGVNPAQCLPVTLDVGTNNQAKLDDPFYIGHKRRRMTGADYDAFVGEFIEAAVDKYGKSVMLQFEDFGNSNAFRLLYHWQEKVCCFNDDIQGTAAVALAGILGSTALTGTAVEDHRFLFLGAGEAGAGIAELIAYAIHVETGKPLEECRKQIFMLDSKGLVCKSRLHELQHHKLKFAHDVG 374
[Close]
BLAST of mRNA_H-elongata_contig75236.15207.1 vs. uniprot
Match: D7FW76_ECTSI (Malic enzyme n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW76_ECTSI)

HSP 1 Score: 320 bits (819), Expect = 1.280e-104
Identity = 153/180 (85.00%), Postives = 165/180 (91.67%), Query Frame = 1 
Query:    1 AGVHPSYCLPVTLDVGTNNQDKINDPFYIGLKRDRLRGPEYDAFVGEFIEAAVDKYGKSVMLQFEDFGNSNAFRLLHHWQEKVCCFNDDIQGTAAVALAGILASTALTGIPVENHRFLFMGAGEAGAGIAELIAYAIKVETGKTIEECRKQIFMLDSKGLVCRSRLEELQHHKRDFAHDT 540
            AGVHPS+CLPV LDVGTNN+ K+NDPFYIGLKR RL G  YDAFV EF+EAAVDKYGKSVMLQFEDFGN+NAFRLLHHWQEKVCCFNDDIQGTAAVALAGIL STA+TG  V +HRFLF+GAGEAGAGIAELIAYAI+VETGK+IEECRKQIFMLDS GLVC+SRL ELQHHK +FAHD 
Sbjct:  179 AGVHPSHCLPVALDVGTNNEAKLNDPFYIGLKRRRLTGEAYDAFVAEFMEAAVDKYGKSVMLQFEDFGNNNAFRLLHHWQEKVCCFNDDIQGTAAVALAGILGSTAITGTVVNDHRFLFLGAGEAGAGIAELIAYAIQVETGKSIEECRKQIFMLDSNGLVCKSRLGELQHHKINFAHDA 358
[Close]
BLAST of mRNA_H-elongata_contig75236.15207.1 vs. uniprot
Match: A0A097IUG2_SCYLO (Malic enzyme n=3 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A097IUG2_SCYLO)

HSP 1 Score: 320 bits (819), Expect = 1.940e-104
Identity = 153/180 (85.00%), Postives = 166/180 (92.22%), Query Frame = 1 
Query:    1 AGVHPSYCLPVTLDVGTNNQDKINDPFYIGLKRDRLRGPEYDAFVGEFIEAAVDKYGKSVMLQFEDFGNSNAFRLLHHWQEKVCCFNDDIQGTAAVALAGILASTALTGIPVENHRFLFMGAGEAGAGIAELIAYAIKVETGKTIEECRKQIFMLDSKGLVCRSRLEELQHHKRDFAHDT 540
            AGV PS+CLPVTLDVGTNNQ K++DPFYIGLKR R+ G +YDAFV EFIEAAVDKYG+SVMLQFEDFGNSNAFRLLHHWQEKVCCFNDDIQGTAAVALAGIL STALTG  V +HRFLF+GAGEAGAGIAELIAYAI VETGK++EECRKQIFMLDSKGLVC+SRL ELQHHK +FAH+ 
Sbjct:  194 AGVDPSHCLPVTLDVGTNNQAKLDDPFYIGLKRKRMSGADYDAFVAEFIEAAVDKYGESVMLQFEDFGNSNAFRLLHHWQEKVCCFNDDIQGTAAVALAGILGSTALTGTDVGDHRFLFLGAGEAGAGIAELIAYAIHVETGKSVEECRKQIFMLDSKGLVCKSRLHELQHHKLNFAHEA 373
[Close]
BLAST of mRNA_H-elongata_contig75236.15207.1 vs. uniprot
Match: A0A097IUG8_9PHAE (Malic enzyme n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A097IUG8_9PHAE)

HSP 1 Score: 307 bits (787), Expect = 1.100e-99
Identity = 145/179 (81.01%), Postives = 160/179 (89.39%), Query Frame = 1 
Query:    4 GVHPSYCLPVTLDVGTNNQDKINDPFYIGLKRDRLRGPEYDAFVGEFIEAAVDKYGKSVMLQFEDFGNSNAFRLLHHWQEKVCCFNDDIQGTAAVALAGILASTALTGIPVENHRFLFMGAGEAGAGIAELIAYAIKVETGKTIEECRKQIFMLDSKGLVCRSRLEELQHHKRDFAHDT 540
            GV PS CLPV+LDVGTNN+DK+NDPFYIGL+R R+ GPEYDAFV EFIEAAVDKYG+SVMLQFEDFGN NAFRLL  WQ +VCCFNDDIQGTAAVALAGIL ST LTGIPVE+HRFLF+GAGEAGAGIAELIAYA+  ETG++IEECRK IFMLDSKGLVC++R  +LQHHK  FAHD 
Sbjct:  190 GVPPSQCLPVSLDVGTNNEDKLNDPFYIGLRRRRVTGPEYDAFVAEFIEAAVDKYGRSVMLQFEDFGNKNAFRLLERWQNEVCCFNDDIQGTAAVALAGILGSTPLTGIPVEHHRFLFLGAGEAGAGIAELIAYAVHCETGESIEECRKHIFMLDSKGLVCKARASDLQHHKLPFAHDV 368
[Close]
BLAST of mRNA_H-elongata_contig75236.15207.1 vs. uniprot
Match: A0A097IUH0_9PHAE (Malic enzyme n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A097IUH0_9PHAE)

HSP 1 Score: 305 bits (780), Expect = 1.200e-98
Identity = 144/178 (80.90%), Postives = 162/178 (91.01%), Query Frame = 1 
Query:    1 AGVHPSYCLPVTLDVGTNNQDKINDPFYIGLKRDRLRGPEYDAFVGEFIEAAVDKYGKSVMLQFEDFGNSNAFRLLHHWQEKVCCFNDDIQGTAAVALAGILASTALTGIPVENHRFLFMGAGEAGAGIAELIAYAIKVETGKTIEECRKQIFMLDSKGLVCRSRLEELQHHKRDFAH 534
            AGVHP +CLPVTLDVGTNNQDK+++P+YIG +  R  G EYDAFVGEFIEAAVDKYGK+VMLQFEDFGNSNAFRLLH WQ+KVCCFNDDIQGTAAVALAG+LAST +TG+PV+++RFLF+GAGEAGAGIAELIAYAI  ET K+IEECRKQIFMLDSKGLVC+SR+  LQHHK  FAH
Sbjct:  187 AGVHPDHCLPVTLDVGTNNQDKLDNPYYIGRREKRTTGAEYDAFVGEFIEAAVDKYGKAVMLQFEDFGNSNAFRLLHQWQDKVCCFNDDIQGTAAVALAGVLASTRVTGVPVQDNRFLFLGAGEAGAGIAELIAYAIHRETDKSIEECRKQIFMLDSKGLVCKSRIGGLQHHKIPFAH 364
[Close]
BLAST of mRNA_H-elongata_contig75236.15207.1 vs. uniprot
Match: A0A835YSM6_9STRA (Malic enzyme n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSM6_9STRA)

HSP 1 Score: 273 bits (697), Expect = 2.900e-86
Identity = 128/183 (69.95%), Postives = 151/183 (82.51%), Query Frame = 1 
Query:    1 AGVHPSYCLPVTLDVGTNNQDKINDPFYIGLKRDRLRGPEYDAFVGEFIEAAVDKYGKSVMLQFEDFGNSNAFRLLHHWQEKVCCFNDDIQGTAAVALAGILASTALTGIPVENHRFLFMGAGEAGAGIAELIAYAIKVETGKTIEECRKQIFMLDSKGLVCRSRLEELQHHKRDFAHDTGKA 549
            AGVHP  CLPVTLDVGTNNQDKINDPFY+GL++ R+ G EYD FV EF+EAA+D YG+ VMLQFEDFGNSNAFRLLH WQ K CCFNDDIQGTA+V L G+LAS  +TG+ +++ + LF+GAGEAG GIA LIAYAI+ ETG  IE+CR+ IF+LDSKGLV +SR+ ELQHHK  +AHD   A
Sbjct:  179 AGVHPLNCLPVTLDVGTNNQDKINDPFYMGLRQPRVTGQEYDDFVKEFMEAAIDAYGRQVMLQFEDFGNSNAFRLLHDWQPKACCFNDDIQGTASVVLGGLLASERITGVELKDRKVLFLGAGEAGVGIANLIAYAIQQETGDPIEKCRENIFLLDSKGLVVKSRIPELQHHKLLYAHDVPTA 361
[Close]
BLAST of mRNA_H-elongata_contig75236.15207.1 vs. uniprot
Match: A0A7S2XYQ4_9STRA (Malic enzyme n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYQ4_9STRA)

HSP 1 Score: 268 bits (686), Expect = 1.570e-84
Identity = 125/180 (69.44%), Postives = 152/180 (84.44%), Query Frame = 1 
Query:    1 AGVHPSYCLPVTLDVGTNNQDKINDPFYIGLKRDRLRGPEYDAFVGEFIEAAVDKYGKSVMLQFEDFGNSNAFRLLHHWQEKVCCFNDDIQGTAAVALAGILASTALTGIPVENHRFLFMGAGEAGAGIAELIAYAIKVETGKTIEECRKQIFMLDSKGLVCRSRLEELQHHKRDFAHDT 540
            AGVHP +CLPVTLDVGTNN DKIN+P Y+GLK+ R+RGPEYDAFV EF+ AA DK+G+++MLQFEDFGN NAFRLL  WQ K C FNDDIQGT+ VALAGILAS  LTG+ VE+H++LF+GAGEAG GIA+LIAYAI    G T+++ R+QI ++DS+GLVC+SRLE LQHHK ++AHD 
Sbjct:  179 AGVHPDFCLPVTLDVGTNNPDKINNPCYMGLKQPRVRGPEYDAFVEEFMLAAQDKWGQNIMLQFEDFGNLNAFRLLDDWQNKACTFNDDIQGTSGVALAGILASEKLTGMKVEDHKYLFLGAGEAGVGIADLIAYAISKNKGITVQQAREQILLVDSRGLVCKSRLEGLQHHKLNYAHDV 358
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig75236.15207.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A097IUF9_9PHAE1.060e-11190.56Malic enzyme n=7 Tax=Sargassum TaxID=3015 RepID=A0... [more]
A0A097IUJ6_9PHAE1.270e-10787.22Malic enzyme n=1 Tax=Desmarestia viridis TaxID=623... [more]
A0A097IUJ0_9PHAE1.650e-10787.22Malic enzyme n=3 Tax=Ectocarpales TaxID=2877 RepID... [more]
A0A097IUJ3_UNDPI4.860e-10585.64Malic enzyme n=3 Tax=Laminariales TaxID=2886 RepID... [more]
D7FW76_ECTSI1.280e-10485.00Malic enzyme n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A097IUG2_SCYLO1.940e-10485.00Malic enzyme n=3 Tax=Scytosiphonaceae TaxID=2891 R... [more]
A0A097IUG8_9PHAE1.100e-9981.01Malic enzyme n=1 Tax=Dictyopteris undulata TaxID=1... [more]
A0A097IUH0_9PHAE1.200e-9880.90Malic enzyme n=1 Tax=Ishige okamurae TaxID=233772 ... [more]
A0A835YSM6_9STRA2.900e-8669.95Malic enzyme n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A7S2XYQ4_9STRA1.570e-8469.44Malic enzyme n=1 Tax=Fibrocapsa japonica TaxID=946... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig75236contigH-elongata_contig75236:1..2771 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score321.2
Seed ortholog evalue3.1e-85
Seed eggNOG ortholog2880.D7FW76
Preferred nameME1
KEGG rclassRC00105
KEGG koko:K00027,ko:K00029
KEGG ReactionR00214,R00216
KEGG Pathwayko00620,ko00710,ko01100,ko01120,ko01200,ko02020,map00620,map00710,map01100,map01120,map01200,map02020
KEGG ModuleM00169,M00172
GOsGO:0000166,GO:0003674,GO:0003824,GO:0004470,GO:0004471,GO:0004473,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005773,GO:0005774,GO:0005829,GO:0005886,GO:0005911,GO:0005975,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006098,GO:0006099,GO:0006101,GO:0006108,GO:0006139,GO:0006140,GO:0006629,GO:0006631,GO:0006633,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006741,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0007275,GO:0007568,GO:0008150,GO:0008152,GO:0008270,GO:0008340,GO:0008610,GO:0009051,GO:0009055,GO:0009058,GO:0009060,GO:0009108,GO:0009117,GO:0009165,GO:0009506,GO:0009507,GO:0009536,GO:0009719,GO:0009725,GO:0009743,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010259,GO:0010941,GO:0015980,GO:0016020,GO:0016043,GO:0016053,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0016999,GO:0017076,GO:0017144,GO:0018130,GO:0019216,GO:0019219,GO:0019220,GO:0019222,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019682,GO:0019693,GO:0019752,GO:0022607,GO:0022900,GO:0030054,GO:0030145,GO:0030312,GO:0030431,GO:0030554,GO:0031090,GO:0031323,GO:0031974,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0033500,GO:0034641,GO:0034654,GO:0036094,GO:0042221,GO:0042592,GO:0042593,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043531,GO:0043648,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045333,GO:0046394,GO:0046483,GO:0046496,GO:0046686,GO:0046872,GO:0046914,GO:0046983,GO:0048037,GO:0048046,GO:0048856,GO:0048878,GO:0050661,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0050897,GO:0051156,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0051259,GO:0051260,GO:0051262,GO:0051287,GO:0051289,GO:0055044,GO:0055086,GO:0055114,GO:0062012,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0071840,GO:0071944,GO:0072330,GO:0072350,GO:0072524,GO:0072525,GO:0072592,GO:0080090,GO:0090407,GO:0097159,GO:0097367,GO:0098588,GO:0098805,GO:1901135,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1902031
EggNOG free text desc.malate dehydrogenase (decarboxylating) (NAD ) activity
EggNOG OGsCOG0281@1,KOG1257@2759
EC1.1.1.38,1.1.1.40
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Exons5
Model size564
Cds size564
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig75236.15207.1prot_H-elongata_contig75236.15207.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig75236 1..2771 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931157.762079-CDS-H-elongata_contig75236:0..1051622931157.762079-CDS-H-elongata_contig75236:0..105Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75236 1..105 +
1691679721.9815803-CDS-H-elongata_contig75236:0..1051691679721.9815803-CDS-H-elongata_contig75236:0..105Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75236 1..105 +
1622931157.7766237-CDS-H-elongata_contig75236:543..6271622931157.7766237-CDS-H-elongata_contig75236:543..627Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75236 544..627 +
1691679721.9957867-CDS-H-elongata_contig75236:543..6271691679721.9957867-CDS-H-elongata_contig75236:543..627Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75236 544..627 +
1622931157.7916505-CDS-H-elongata_contig75236:1181..12381622931157.7916505-CDS-H-elongata_contig75236:1181..1238Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75236 1182..1238 +
1691679722.0065684-CDS-H-elongata_contig75236:1181..12381691679722.0065684-CDS-H-elongata_contig75236:1181..1238Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75236 1182..1238 +
1622931157.8118327-CDS-H-elongata_contig75236:1759..19271622931157.8118327-CDS-H-elongata_contig75236:1759..1927Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75236 1760..1927 +
1691679722.0211737-CDS-H-elongata_contig75236:1759..19271691679722.0211737-CDS-H-elongata_contig75236:1759..1927Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75236 1760..1927 +
1622931157.8378491-CDS-H-elongata_contig75236:2621..27711622931157.8378491-CDS-H-elongata_contig75236:2621..2771Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75236 2622..2771 +
1691679722.0347784-CDS-H-elongata_contig75236:2621..27711691679722.0347784-CDS-H-elongata_contig75236:2621..2771Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75236 2622..2771 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig75236.15207.1

>prot_H-elongata_contig75236.15207.1 ID=prot_H-elongata_contig75236.15207.1|Name=mRNA_H-elongata_contig75236.15207.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=188bp
AGVHPSYCLPVTLDVGTNNQDKINDPFYIGLKRDRLRGPEYDAFVGEFIE
AAVDKYGKSVMLQFEDFGNSNAFRLLHHWQEKVCCFNDDIQGTAAVALAG
ILASTALTGIPVENHRFLFMGAGEAGAGIAELIAYAIKVETGKTIEECRK
QIFMLDSKGLVCRSRLEELQHHKRDFAHDTGKAEGMD*
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mRNA from alignment at H-elongata_contig75236:1..2771+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig75236.15207.1 ID=mRNA_H-elongata_contig75236.15207.1|Name=mRNA_H-elongata_contig75236.15207.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2771bp|location=Sequence derived from alignment at H-elongata_contig75236:1..2771+ (Himanthalia elongata Himel1 dioecious)
GCCGGGGTGCATCCTTCGTACTGCCTCCCGGTTACCCTCGACGTCGGGAC
CAACAATCAGGACAAAATCAACGATCCATTCTACATCGGCCTTAAACGTG
ATAGGGTAAGCACGTCATTATTGTTGAAGCGATAGCTTTCCGTGGCGAAC
ATACCGAACAGCGTCCGCACACTGGTTGGGTTTACGGCAATTAGAACAAA
AGCCACATGCAGCTTCCATAATTGAGGGTTAGGATGAGACATCATCATTT
GAAGCGTTATGATCGAGTGGGCTTTGAGGAGAGAGCCTGGCTATCCATGG
AATCGATCCAATGTCACTTAGCTCTCTTGAGGAGTTCAAGGTTTAGAGCT
ATTCTTGTTTGTCTTTTCTGTAGTATCACCAAACCAAGCCCATATTTTGA
GCACTCGGCTTCTCTCCGCCCCCGTCAAGCGATGTTTGATGGAGCGTACA
TAGTGATTGCTCACCCCCCCCCTCTCTTACCTTACCCTACCTTCTCGCTC
GCTCTCTCTTCGGGGTTTCTGTCTTCCCTTTGGCCTTTGACAGCTTAGGG
GTCCTGAATACGACGCGTTTGTGGGAGAGTTCATCGAGGCTGCCGTAGAT
AAGTACGGCAAATCGGTCATGCTTCAGGTGAAATATGGTGTTCCACGGCA
TGGGCGGACAACGGGTCGATGGGCGTCATCTCTCCACTCTCCAACTGTTC
ATATGAAGTATTCTATTCTATTCTATTCTATTCTATTATATTAATATCAA
TAGCATGTCCACACGCGTCAGTAAGAGAAAATGCATGCTACGACCAAGAT
TATATATTCGGGTTCAATGAGTTTTCCCTGTTCAGCTGACCACAAGCAGG
AGGCAACCAAATACAGTTGATCCTTACTCTGCTATATGTGATGACGTCAT
GACCGCACATTACTACCCTTACATGGATGATCCTCTGTAGGCGTCTTTAA
AGGCACTCCGTATGGTTTCTTCTTCGATACACATCGAATTTCAAATCACA
ACTCGCCCCGTGGTCTCGAGTGCTCACCATTCAGACCATACAGCACCACT
GCGCTTTTGGTTTTGCTATCTTCGATGCGATGGACCACCAATACGATGCA
CCTTTCAAGCGCCTTTTCCTGCCACCGGCGTGTTTGCACTCTGCGCTGAT
TTAATGGGGTTGACTGATCCGATCCGACCAGTTCGAGGATTTTGGGAACA
GCAACGCCTTCCGGCTTCTTCATCATTGGCAGGAAAAGGTCAGATAATAC
TATTAATACCAAGATAATACTACTAATACCAAGATAATACTATTAATACC
AAGATAATACTATTAATACCAAGATAATACTATTAATACCAAGATAATAC
TATTAATACCAAGATAATACTATTAATACCAAGATAATACTATTAATACC
TCAGTGTGCCAACTTCGTAAAATCAATGGTTCGCCATCCGCTGCTGGCGT
AATTTTGGTAGATAGAGAATGTGCTTCCTATGAGGCAGACGTTTCGTGAC
ATGAAATAAATGCAACCAAGTGCCTGTAATAGATCCTACTCGAGGTCTAA
AAGAAACATGGAACACAGGGATGATCGATGATGCCCCGAGTATCTTACGA
TAGTTTGTCCGTAGATTATCGATTATGTATTTTTCCGAAGCCGATGTGAT
GGTGTGCCGATGATCGGAGGTTTTTCATTGGTTCAGATATGTAATTTTAT
TTTTAAGCGGCGGAATAAATCGGGTCATCTCATACCGTGAACCGTCTTTT
CCTACACAGGTATGCTGCTTCAACGATGACATTCAGGGCACTGCTGCAGT
GGCCCTGGCAGGGATTCTAGCATCCACGGCCCTCACTGGAATCCCAGTGG
AAAACCATCGCTTCCTGTTCATGGGCGCAGGAGAAGCCGGGGCGGGGATT
GCTGAGCTTATCGCTTACGCCATCAAGGTAAGATGATACTCCCATCTTGC
GCCACCCGTCGCAGTGTGCTGCTTTGTAAGTGCCTGAGCATAACGGGCAT
AGCTGTACGGTATTGCCGGTCGCCCCGATGGTTCAGTTGGTAACCTCAAA
ACCTTGTGACGTGAGTTCGAATCTCGGCGCAGTCTCACGAACTGGGATTT
TCTCTCATATCATGTCCAACAAGTGGAGAATGATTATTTCGTGGGTACAC
AAAATTCAACATACTTCACGGTCGACGAGGGAATGGGCCTGCTGATCCTT
CTCGCGATAAGAAATTAATAAGAAATTAGTGCAAGCACCGCATAAGAAAG
GTGGAGAAATCCTGTGTGACCTTCCTCACCGGTTGGTGCGTCCACAAGTC
TGACGTCTAGAATAAATCGGATGGCCACACACGCGCACACACGGAGGGGG
TAAGTTACGCAGGTTTCAAGTAGGAATTGTACAAGTAGAGAGTGTGTCCC
CTTTGTCGCGCTTGATCAGAGGTTTTCGCAATAAGTATCATTGATCCCCC
CCTATCATAGGAGGATTGATCAATACGAGTGGCGTAGAAGGACTAGGACG
ACAGGGCCGGATTGCGCGGTTATGTGCAATTTAATAAATACACACACACA
ACATATATATATCCACATCACGAGGATGCCGACTCATATGTGTGTCGGCG
TTACTCGATTGCGTGGCCAAGGTGGAAACAGGAAAGACTATCGAGGAGTG
CCGGAAGCAAATTTTTATGCTAGACTCGAAGGGCCTGGTGTGTCGAAGCC
GTCTTGAAGAATTACAGCATCACAAGCGTGATTTTGCACATGACACTGGT
AAGGCAGAGGGGATGGACTGA
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Coding sequence (CDS) from alignment at H-elongata_contig75236:1..2771+

>mRNA_H-elongata_contig75236.15207.1 ID=mRNA_H-elongata_contig75236.15207.1|Name=mRNA_H-elongata_contig75236.15207.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1128bp|location=Sequence derived from alignment at H-elongata_contig75236:1..2771+ (Himanthalia elongata Himel1 dioecious)
GCCGGGGTGCATCCTTCGTACTGCCTCCCGGTTACCCTCGACGTCGGGAC
CAACAATCAGGACAAAATCAACGATCCATTCTACATCGGCCTTAAACGTG
ATAGGGCCGGGGTGCATCCTTCGTACTGCCTCCCGGTTACCCTCGACGTC
GGGACCAACAATCAGGACAAAATCAACGATCCATTCTACATCGGCCTTAA
ACGTGATAGGCTTAGGGGTCCTGAATACGACGCGTTTGTGGGAGAGTTCA
TCGAGGCTGCCGTAGATAAGTACGGCAAATCGGTCATGCTTCAGCTTAGG
GGTCCTGAATACGACGCGTTTGTGGGAGAGTTCATCGAGGCTGCCGTAGA
TAAGTACGGCAAATCGGTCATGCTTCAGTTCGAGGATTTTGGGAACAGCA
ACGCCTTCCGGCTTCTTCATCATTGGCAGGAAAAGTTCGAGGATTTTGGG
AACAGCAACGCCTTCCGGCTTCTTCATCATTGGCAGGAAAAGGTATGCTG
CTTCAACGATGACATTCAGGGCACTGCTGCAGTGGCCCTGGCAGGGATTC
TAGCATCCACGGCCCTCACTGGAATCCCAGTGGAAAACCATCGCTTCCTG
TTCATGGGCGCAGGAGAAGCCGGGGCGGGGATTGCTGAGCTTATCGCTTA
CGCCATCAAGGTATGCTGCTTCAACGATGACATTCAGGGCACTGCTGCAG
TGGCCCTGGCAGGGATTCTAGCATCCACGGCCCTCACTGGAATCCCAGTG
GAAAACCATCGCTTCCTGTTCATGGGCGCAGGAGAAGCCGGGGCGGGGAT
TGCTGAGCTTATCGCTTACGCCATCAAGGTGGAAACAGGAAAGACTATCG
AGGAGTGCCGGAAGCAAATTTTTATGCTAGACTCGAAGGGCCTGGTGTGT
CGAAGCCGTCTTGAAGAATTACAGCATCACAAGCGTGATTTTGCACATGA
CACTGGTAAGGCAGAGGGGATGGACTGAGTGGAAACAGGAAAGACTATCG
AGGAGTGCCGGAAGCAAATTTTTATGCTAGACTCGAAGGGCCTGGTGTGT
CGAAGCCGTCTTGAAGAATTACAGCATCACAAGCGTGATTTTGCACATGA
CACTGGTAAGGCAGAGGGGATGGACTGA
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