prot_H-elongata_contig75234.15206.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig75234.15206.1
Unique Nameprot_H-elongata_contig75234.15206.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length146
Homology
BLAST of mRNA_H-elongata_contig75234.15206.1 vs. uniprot
Match: D8LLR4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLR4_ECTSI)

HSP 1 Score: 109 bits (272), Expect = 8.050e-26
Identity = 63/124 (50.81%), Postives = 77/124 (62.10%), Query Frame = 0
Query:    2 LRWMSLPSR-------SSLGDDAGAS--SSPSGRSFHCVVFHGGSCYVTGGSDGNRKFGDMWRFPARESPPPLTTLAARALASNLAVLDGGDGSGAVESSIYLQDGVGKPQHAGRIGFLKNTTE 116
            L W+SLPS        ++  ++AG +  SSP+GRSFHC  FHGG+CY+TGGSDG RKFGDMWRF ARE+PPPLTTLAARA  S       G G G V  +     G GK +  G  G L+   +
Sbjct:  221 LSWVSLPSGQGGSAAFAANAEEAGRATPSSPTGRSFHCAFFHGGACYITGGSDGARKFGDMWRFCARETPPPLTTLAARAFVSGATARRNGGGRGRVGGA----GGDGKCELGGLPGELREALQ 340          
BLAST of mRNA_H-elongata_contig75234.15206.1 vs. uniprot
Match: A0A6H5JG58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG58_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 1.330e-25
Identity = 64/124 (51.61%), Postives = 78/124 (62.90%), Query Frame = 0
Query:    2 LRWMSLPS----RSSLGDDAGAS-----SSPSGRSFHCVVFHGGSCYVTGGSDGNRKFGDMWRFPARESPPPLTTLAARALASNLAVLDGGDGSGAVESSIYLQDGVGKPQHAGRIGFLKNTTE 116
            L W+SLPS     ++   + GA+     S+P+GRSFHC  FHGG+CYVTGGSDG RKFGDMWRF ARE+PPPLTTLAARA  S       G G G+V  +     G GK + AG  G L+   +
Sbjct:  615 LSWVSLPSDQRGSAAFATNTGAAGRATPSAPTGRSFHCAFFHGGACYVTGGSDGARKFGDMWRFCARETPPPLTTLAARAFVSGATARRNGGGRGSVGGA----GGDGKCELAGLPGELREALQ 734          
BLAST of mRNA_H-elongata_contig75234.15206.1 vs. uniprot
Match: A0A836CMQ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMQ1_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 3.880e-11
Identity = 32/55 (58.18%), Postives = 40/55 (72.73%), Query Frame = 0
Query:   22 SPSGRSFHCVVFHGGSCYVTGGSDGNRKFGDMWRFPARESPPPLTTLAARALASN 76
            SPS RSFH  VF  G  Y+  GS+G+ KF D+WR+  RE+PPPL TLAARA+ +N
Sbjct:  234 SPSARSFHGSVFTRGCIYILSGSNGSEKFADVWRYAVRETPPPLLTLAARAVLAN 288          
BLAST of mRNA_H-elongata_contig75234.15206.1 vs. uniprot
Match: A0A836CLJ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLJ1_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 9.220e-10
Identity = 32/53 (60.38%), Postives = 39/53 (73.58%), Query Frame = 0
Query:   22 SPSGRSFHCVVFHGGSCYVTGGSDGNRKFGDMWRFP-ARESPPPLTTLAARAL 73
            SPS RSFH  +F  GS YV  GS+G+ KF D+WR+   R++PPPL TLAARAL
Sbjct:  343 SPSARSFHGSIFSAGSVYVFSGSNGSEKFSDVWRYQQVRQTPPPLLTLAARAL 395          
BLAST of mRNA_H-elongata_contig75234.15206.1 vs. uniprot
Match: A0A7S2UZD9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZD9_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 4.200e-7
Identity = 26/54 (48.15%), Postives = 34/54 (62.96%), Query Frame = 0
Query:   23 PSGRSFHCVVFHGGSCYVTGGSDGNRKFGDMWRFPARESPPPLTTLAARALASN 76
            P+ R+FHC  F  G+ Y+ GGSDG  +  D+WR+   E+P PLT LA  AL  N
Sbjct:  336 PAPRAFHCSCFFEGAIYIFGGSDGESRHCDVWRYTLEENPLPLTELALAALGKN 389          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig75234.15206.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LLR4_ECTSI8.050e-2650.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JG58_9PHAE1.330e-2551.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CMQ1_9STRA3.880e-1158.18Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CLJ1_9STRA9.220e-1060.38Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2UZD9_9STRA4.200e-748.15Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 12..98
e-value: 4.0E-6
score: 27.9
IPR015915Kelch-type beta propellerSUPERFAMILY117281Kelch motifcoord: 21..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig75234contigH-elongata_contig75234:1813..2273 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig75234.15206.1mRNA_H-elongata_contig75234.15206.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig75234 1768..2568 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig75234.15206.1 ID=prot_H-elongata_contig75234.15206.1|Name=mRNA_H-elongata_contig75234.15206.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=146bp
MLRWMSLPSRSSLGDDAGASSSPSGRSFHCVVFHGGSCYVTGGSDGNRKF
GDMWRFPARESPPPLTTLAARALASNLAVLDGGDGSGAVESSIYLQDGVG
KPQHAGRIGFLKNTTESEESVQGARMNFRLLQDRRLVAVDDVETN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015915Kelch-typ_b-propeller