prot_H-elongata_contig75234.15205.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig75234.15205.1
Unique Nameprot_H-elongata_contig75234.15205.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length140
Homology
BLAST of mRNA_H-elongata_contig75234.15205.1 vs. uniprot
Match: A0A6H5JG58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG58_9PHAE)

HSP 1 Score: 218 bits (555), Expect = 1.800e-64
Identity = 103/141 (73.05%), Postives = 113/141 (80.14%), Query Frame = 0
Query:    1 STGDEYFDDTHSFNLVTNAWGVLKTTGDRPSPRYEHQAFIDGNSMYVVGGGSFEPEGPDLDVYRLHLA---GARVLEWERIRPIGTPPRCRAAHGLAWDRVGRAAYIWGGFTSGMKLDCTFHALRLPP-CPSVPLVAGSVA 137
            STG EYF+DT +F+L T  W  L TTG+RPSPRY+HQAF+D + MYVVGGGSFEPEGPDLDVYRL L    G  +LEWER+RP GTPPRCRAAHGLAWDRVGRAAYIWGGFTSGM+LD TF ALRLPP  P VP  A   A
Sbjct:  187 STGHEYFNDTQAFDLATGTWTALATTGERPSPRYKHQAFLDADFMYVVGGGSFEPEGPDLDVYRLPLTAGGGKALLEWERVRPTGTPPRCRAAHGLAWDRVGRAAYIWGGFTSGMELDSTFCALRLPPSAPPVPRAAQKTA 327          
BLAST of mRNA_H-elongata_contig75234.15205.1 vs. uniprot
Match: D8LLR4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLR4_ECTSI)

HSP 1 Score: 124 bits (310), Expect = 1.810e-31
Identity = 66/123 (53.66%), Postives = 76/123 (61.79%), Query Frame = 0
Query:    1 STGDEYFDDTHSFNLVTNAWGVLKTTGDRPSPRYEHQAFIDGNSMYVVGGGSFEPEGPDLDVYRLHLA---GARVLEWERIRPIGTPPRCRAAHGLAWDRVGRAAYIWGGFTSGMKLDCTFHA 120
            STG EYF+DT +F+L T  W  L TTG+RPSPRY+HQAF+D + MYVVGGGSFEPEGPDLDVYRL L    G  +LEWER  P+ +     AA   A   VG     W    SG      F A
Sbjct:  118 STGHEYFNDTQAFDLATGTWTALATTGERPSPRYKHQAFLDADFMYVVGGGSFEPEGPDLDVYRLPLTAGGGKALLEWERA-PVPSTATAAAAAPAAVPVVGEKL-SWVSLPSGQGGSAAFAA 238          
BLAST of mRNA_H-elongata_contig75234.15205.1 vs. uniprot
Match: A0A836CLJ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLJ1_9STRA)

HSP 1 Score: 123 bits (309), Expect = 2.210e-30
Identity = 60/124 (48.39%), Postives = 79/124 (63.71%), Query Frame = 0
Query:    1 STGDEYFDDTHSFNLVTNAWGVLKTTGDRPSPRYEHQAFIDGNSMYVVGGGSFEPEGPDLDVYRLHLAGARVLEWERIRPIGTPPRCRAAHGLAWDRV-GRAAYIWGGFTSGMKLDCTFHALRL 123
            STG EY +  H +NL TN W  L T G RP+PRY+HQAFI G+SMYV+GGG F+P   D+DV+RL L     + W ++   G+ P  R AH  A+D   G A Y+WGGFT+G++    F+ L L
Sbjct:  207 STGLEYSNALHQYNLKTNRWQQLATLGPRPTPRYKHQAFIHGSSMYVIGGGCFKPLCEDIDVHRLDLT---TMTWRQVATRGSVPMARVAHTCAYDSSEGGAVYMWGGFTAGLQCLRNFYRLSL 327          
BLAST of mRNA_H-elongata_contig75234.15205.1 vs. uniprot
Match: A0A836CQE2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQE2_9STRA)

HSP 1 Score: 115 bits (287), Expect = 9.700e-28
Identity = 55/120 (45.83%), Postives = 71/120 (59.17%), Query Frame = 0
Query:    1 STGDEYFDDTHSFNLVTNAWGVLKTTGDRPSPRYEHQAFIDGNSMYVVGGGSFEPEGPDLDVYRLHLAGARVLEWERIRPIGTPPRCRAAHGLAWDRVGRAAYIWGGFTSGMKLDCTFHA 120
            STG  Y +D   +N+ TN W  L TTG RPSPRY+HQA + G++MYV+GGG F+PE   +D+YRL L   R L W+     G  PR R AH  ++D      Y+WGGFT  +     F A
Sbjct:  171 STGLHYTNDLFEYNMTTNCWRKLATTGKRPSPRYKHQAVVVGDAMYVIGGGCFKPEQAAIDLYRLDL---RTLVWDTPAMGGEVPRARVAHSCSFDPATSTIYLWGGFTGELSRLQDFFA 287          
BLAST of mRNA_H-elongata_contig75234.15205.1 vs. uniprot
Match: D7FP90_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP90_ECTSI)

HSP 1 Score: 107 bits (267), Expect = 7.240e-25
Identity = 53/124 (42.74%), Postives = 69/124 (55.65%), Query Frame = 0
Query:    1 STGDEYFDDTHSFNLVTNAWGVLKTTGDRPSPRYEHQAFIDGNSMYVVGGGSFEPEGPDLDVYRLHLAGARVLEWERIRPIGTPPRCRAAHGLAWDRVGRAAYIWGGFTSGMKLDCTFHALRLP 124
            STG  Y +D   +N+ TN W  L T+G  PSPRY+HQA + G+ MYV+GGG F+PE   +D+Y L L   R L WE     G  P+ R AH  ++D      Y+WGGFTS +     F     P
Sbjct:  177 STGLHYTNDLFEYNVRTNKWKRLVTSGRMPSPRYKHQAVVVGHKMYVIGGGCFKPEQSGIDLYCLDL---RSLVWEETTMKGELPKARVAHSCSFDAETDTIYLWGGFTSELSRLQDFFGFHCP 297          
BLAST of mRNA_H-elongata_contig75234.15205.1 vs. uniprot
Match: D7FP81_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP81_ECTSI)

HSP 1 Score: 106 bits (264), Expect = 1.700e-24
Identity = 52/121 (42.98%), Postives = 70/121 (57.85%), Query Frame = 0
Query:    1 STGDEYFDDTHSFNLVTNAWGVLKTTGDRPSPRYEHQAFIDGNSMYVVGGGSFEPEGPDLDVYRLHLAGARVLEWE--RIRPIGTPPRCRAAHGLAWDRVGRAAYIWGGFTSGMKLDCTFH 119
            STG  Y +D   +N+ +N W  L TTG +PSPRY+HQA   G+ MYV+GGG F+PE   +D+Y L L   + L WE       G  P+ R AH  ++D VG   Y+WGGFT  +     F+
Sbjct:  172 STGLHYSNDLFEYNVCSNRWRKLTTTGRKPSPRYKHQAVAVGDKMYVIGGGCFKPEQSSIDLYCLDL---KTLVWEMDETEMKGDLPKARVAHSCSFDPVGGDIYLWGGFTGELSRLADFY 289          
BLAST of mRNA_H-elongata_contig75234.15205.1 vs. uniprot
Match: A0A7R9GAP2_9CRUS (Hypothetical protein n=1 Tax=Notodromas monacha TaxID=399045 RepID=A0A7R9GAP2_9CRUS)

HSP 1 Score: 51.6 bits (122), Expect = 7.830e-5
Identity = 30/83 (36.14%), Postives = 48/83 (57.83%), Query Frame = 0
Query:    3 GDEYFDDTHS-----FNLVTNAWGVLKTTGDRPSPRYEHQAFIDG-NSMYVVGGGSFEPEGPDLDVYRLHLAGARVLEWERIR 79
            G E+ D +HS     +N+ +N W ++ TTG +P P  +H   I G N++Y+ GG     E    D+YRL+++    L+WER+R
Sbjct:  354 GGEFSDGSHSDELWTYNVTSNIWILVNTTGVKPPPLSKHTLTIVGDNTLYLFGGSKSYGEFSS-DMYRLNMSW-NPLKWERVR 434          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig75234.15205.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JG58_9PHAE1.800e-6473.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLR4_ECTSI1.810e-3153.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CLJ1_9STRA2.210e-3048.39Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CQE2_9STRA9.700e-2845.83Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FP90_ECTSI7.240e-2542.74Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FP81_ECTSI1.700e-2442.98Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7R9GAP2_9CRUS7.830e-536.14Hypothetical protein n=1 Tax=Notodromas monacha Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13854Kelch_5coord: 30..68
e-value: 3.5E-5
score: 23.7
NoneNo IPR availablePANTHERPTHR46647FAMILY NOT NAMEDcoord: 11..117
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 1..122
e-value: 4.0E-10
score: 41.2
IPR011043Galactose oxidase/kelch, beta-propellerSUPERFAMILY50965Galactose oxidase, central domaincoord: 2..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig75234contigH-elongata_contig75234:697..1116 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig75234.15205.1mRNA_H-elongata_contig75234.15205.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig75234 697..1116 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig75234.15205.1 ID=prot_H-elongata_contig75234.15205.1|Name=mRNA_H-elongata_contig75234.15205.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=140bp
STGDEYFDDTHSFNLVTNAWGVLKTTGDRPSPRYEHQAFIDGNSMYVVGG
GSFEPEGPDLDVYRLHLAGARVLEWERIRPIGTPPRCRAAHGLAWDRVGR
AAYIWGGFTSGMKLDCTFHALRLPPCPSVPLVAGSVAGSS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015915Kelch-typ_b-propeller
IPR011043Gal_Oxase/kelch_b-propeller