prot_H-elongata_contig75217.15203.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig75217.15203.1
Unique Name	prot_H-elongata_contig75217.15203.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	164

Homology

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BLAST of mRNA_H-elongata_contig75217.15203.1 vs. uniprot
Match: D8LQ75_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ75_ECTSI)

HSP 1 Score: 115 bits (287), Expect = 1.860e-29
Identity = 59/67 (88.06%), Postives = 62/67 (92.54%), Query Frame = 0

Query:    1 MVFEAIKALKERNGSSIQAIKKHITTANPALNFTPHQMRSALKKGVESGKFIKVKSSYKLSLEAKKP 67
            MVF+AIK+LKERNGSSIQAIKK IT   PALNFTPHQMRSALKKGVE+GKFIKVKSSYKLS EAKKP
Sbjct:    1 MVFDAIKSLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGVETGKFIKVKSSYKLSAEAKKP 67

[Close]

BLAST of mRNA_H-elongata_contig75217.15203.1 vs. uniprot
Match: D8LQ80_ECTSI (Histone H1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ80_ECTSI)

HSP 1 Score: 113 bits (283), Expect = 2.630e-29
Identity = 58/68 (85.29%), Postives = 61/68 (89.71%), Query Frame = 0

Query:    1 MVFEAIKALKERNGSSIQAIKKHITTANPALNFTPHQMRSALKKGVESGKFIKVKSSYKLSLEAKKPA 68
            MVF+AIK LKERNGSSIQAIKK IT   P LNFTPHQMRSALKKGVESGKFIK+K+SYKLS EAKKPA
Sbjct:   11 MVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFIKMKASYKLSAEAKKPA 78

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BLAST of mRNA_H-elongata_contig75217.15203.1 vs. uniprot
Match: A0A6H5KST0_9PHAE (H15 domain-containing protein n=6 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KST0_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 6.050e-29
Identity = 57/68 (83.82%), Postives = 61/68 (89.71%), Query Frame = 0

Query:    1 MVFEAIKALKERNGSSIQAIKKHITTANPALNFTPHQMRSALKKGVESGKFIKVKSSYKLSLEAKKPA 68
            MVF+AIK LKERNGSSIQAIKK IT   P LNFTPHQMRSALKKGVESGKF+K+K+SYKLS EAKKPA
Sbjct:    1 MVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFVKMKASYKLSAEAKKPA 68

[Close]

BLAST of mRNA_H-elongata_contig75217.15203.1 vs. uniprot
Match: A0A6H5KCU1_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCU1_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 4.720e-27
Identity = 57/68 (83.82%), Postives = 60/68 (88.24%), Query Frame = 0

Query:    1 MVFEAIKALKERNGSSIQAIKKHITTANPALNFTPHQMRSALKKGVESGKFIKVKSSYKLSLEAKKPA 68
            MVF+AIK LKERNGSSIQAIKK IT   P LNFTPHQMR ALKKGVESGKFIK+K+SYKLS EAKKPA
Sbjct:  104 MVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRGALKKGVESGKFIKMKASYKLSPEAKKPA 171

[Close]

BLAST of mRNA_H-elongata_contig75217.15203.1 vs. uniprot
Match: A0A6H5JHR9_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHR9_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 4.860e-27
Identity = 55/68 (80.88%), Postives = 59/68 (86.76%), Query Frame = 0

Query:    1 MVFEAIKALKERNGSSIQAIKKHITTANPALNFTPHQMRSALKKGVESGKFIKVKSSYKLSLEAKKPA 68
            MVF+AIKALKER GSS+ A+KK I    P+LNFTPHQMRSALKKG ESGKFIKVKSSYKLS EAKKPA
Sbjct:    1 MVFDAIKALKERGGSSLPALKKQIMATYPSLNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKPA 68

[Close]

BLAST of mRNA_H-elongata_contig75217.15203.1 vs. uniprot
Match: D7G4I5_ECTSI (H15 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4I5_ECTSI)

HSP 1 Score: 107 bits (267), Expect = 1.230e-26
Identity = 55/68 (80.88%), Postives = 59/68 (86.76%), Query Frame = 0

Query:    1 MVFEAIKALKERNGSSIQAIKKHITTANPALNFTPHQMRSALKKGVESGKFIKVKSSYKLSLEAKKPA 68
            MVF+AIKALKER GSS+ A+KK I    P+LNFTPHQMRSALKKG ESGKFIKVKSSYKLS EAKKPA
Sbjct:   12 MVFDAIKALKERGGSSLPALKKQIMATYPSLNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKPA 79

[Close]

BLAST of mRNA_H-elongata_contig75217.15203.1 vs. uniprot
Match: D8LJB8_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJB8_ECTSI)

HSP 1 Score: 97.4 bits (241), Expect = 1.750e-21
Identity = 50/68 (73.53%), Postives = 57/68 (83.82%), Query Frame = 0

Query:    1 MVFEAIKALKERNGSSIQAIKKHITTANPALNFTPHQMRSALKKGVESGKFIKVKSSYKLSLEAKKPA 68
            M  EA+KALKERNGSS+ AIKKHIT + P+L FT H MRSALKKGVESGKFIKVK+SYKLS   ++PA
Sbjct:    7 MTIEAVKALKERNGSSLFAIKKHITASYPSLTFTAHFMRSALKKGVESGKFIKVKNSYKLSAYRQEPA 74

[Close]

BLAST of mRNA_H-elongata_contig75217.15203.1 vs. uniprot
Match: A0A6H5K9S6_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9S6_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 2.540e-21
Identity = 46/61 (75.41%), Postives = 53/61 (86.89%), Query Frame = 0

Query:    1 MVFEAIKALKERNGSSIQAIKKHITTANPALNFTPHQMRSALKKGVESGKFIKVKSSYKLS 61
            MVF+AIK LKERNGSSIQA+KK IT   PAL+FTPHQMRSALKKGVE+GKFIKV+ +  L+
Sbjct:    1 MVFDAIKTLKERNGSSIQAMKKSITATYPALHFTPHQMRSALKKGVETGKFIKVRHALPLA 61

[Close]

BLAST of mRNA_H-elongata_contig75217.15203.1 vs. uniprot
Match: D8LMF1_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMF1_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 1.200e-20
Identity = 47/67 (70.15%), Postives = 52/67 (77.61%), Query Frame = 0

Query:    1 MVFEAIKALKERNGSSIQAIKKHITTANPALNFTPHQMRSALKKGVESGKFIKVKSSYKLSLEAKKP 67
            M   AI ALKERNGSS+ AIKKHI    P LNF PHQ+R ALKKG E+G FIKVK+SYK+S EAKKP
Sbjct:    7 MAKVAILALKERNGSSVPAIKKHIQATYPTLNFLPHQLRGALKKGTETGTFIKVKASYKVSPEAKKP 73

[Close]

BLAST of mRNA_H-elongata_contig75217.15203.1 vs. uniprot
Match: A0A6H5JIM8_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM8_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 1.820e-19
Identity = 47/61 (77.05%), Postives = 53/61 (86.89%), Query Frame = 0

Query:    1 MVFEAIKALKERNGSSIQAIKKHITTANPALNFTPHQMRSALKKGVESGKFIKVKSSYKLS 61
            M  EA+KALKERNGSS+ AIKKHIT + P+L FT H +RSALKKGVESGKFIKVK+SYKLS
Sbjct:    7 MTVEAVKALKERNGSSLFAIKKHITASYPSLTFTGHFLRSALKKGVESGKFIKVKNSYKLS 67

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig75217.15203.1 vs. uniprot

BLAST of mRNA_H-elongata_contig75217.15203.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LQ75_ECTSI	1.860e-29	88.06	H15 domain-containing protein n=1 Tax=Ectocarpus s...	[more]
D8LQ80_ECTSI	2.630e-29	85.29	Histone H1 n=1 Tax=Ectocarpus siliculosus TaxID=28...	[more]
A0A6H5KST0_9PHAE	6.050e-29	83.82	H15 domain-containing protein n=6 Tax=Ectocarpus T...	[more]
A0A6H5KCU1_9PHAE	4.720e-27	83.82	H15 domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5JHR9_9PHAE	4.860e-27	80.88	H15 domain-containing protein n=1 Tax=Ectocarpus s...	[more]
D7G4I5_ECTSI	1.230e-26	80.88	H15 domain-containing protein n=2 Tax=Ectocarpus T...	[more]
D8LJB8_ECTSI	1.750e-21	73.53	H15 domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5K9S6_9PHAE	2.540e-21	75.41	H15 domain-containing protein n=1 Tax=Ectocarpus s...	[more]
D8LMF1_ECTSI	1.200e-20	70.15	H15 domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5JIM8_9PHAE	1.820e-19	77.05	H15 domain-containing protein n=1 Tax=Ectocarpus s...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005819	Histone H5	PRINTS	PR00624	HISTONEH5	coord: 87..101 score: 31.11 coord: 148..163 score: 32.22 coord: 126..143 score: 31.48 coord: 8..25 score: 54.32
IPR005818	Linker histone H1/H5, domain H15	SMART	SM00526	h15plus2	coord: 1..57 e-value: 6.5E-14 score: 62.2
IPR005818	Linker histone H1/H5, domain H15	PFAM	PF00538	Linker_histone	coord: 1..60 e-value: 3.3E-17 score: 62.6
IPR005818	Linker histone H1/H5, domain H15	PROSITE	PS51504	H15	coord: 1..62 score: 26.389
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 1..76 e-value: 8.6E-15 score: 56.7
None	No IPR available	PANTHER	PTHR11467	HISTONE H1	coord: 1..159
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 1..68

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig75217	contig	H-elongata_contig75217:1035..1759 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig75217.15203.1	mRNA_H-elongata_contig75217.15203.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig75217 1035..1765 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig75217.15203.1 ID=prot_H-elongata_contig75217.15203.1|Name=mRNA_H-elongata_contig75217.15203.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=164bp
MVFEAIKALKERNGSSIQAIKKHITTANPALNFTPHQMRSALKKGVESGK
FIKVKSSYKLSLEAKKPALKPKVKKPVAKKVKAAPKKMVKKVKKVVSKKA
ATKKVTSKKAATPKKATTPKKTPTVKKIVTKKVATKKVTATAAKKTTVTK
KKAAPKKPAAEKA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005819	Histone_H5
IPR005818	Histone_H1/H5_H15
IPR036388	WH-like_DNA-bd_sf
IPR036390	WH_DNA-bd_sf