prot_H-elongata_contig75210.15202.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig75210.15202.1
Unique Nameprot_H-elongata_contig75210.15202.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length228
Homology
BLAST of mRNA_H-elongata_contig75210.15202.1 vs. uniprot
Match: D7G064_ECTSI (Conserved oligomeric Golgi complex subunit 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G064_ECTSI)

HSP 1 Score: 240 bits (612), Expect = 4.530e-70
Identity = 153/237 (64.56%), Postives = 168/237 (70.89%), Query Frame = 0
Query:    1 QEEIANFRPTAEHLDYPAVLERAR---AREDAAAKTLTAPKAETPTVEPPPGS------VYSTWYPPLRSTLLVLSKVYRAVDMGVFEDLAQLAVAACAESMKRAAITISGGVINRSVALS--SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGGLDAQLFLIKHLLTLREQLTPFHIQFVRAEHKLNFGSTRMALRKFIRHTPSLFRLSRKNALLELTVDSIPTIDEFQAR 226
            Q++IA+FRPT E LDYP +L RA       D+     T P  + P+   PP S       Y+TWYPPLRSTL VLSKVYRAVDMGVFEDLAQL+VAACAES+K+AA++IS GV   S      S                     XXXXXXXXX  GEGGLDAQLFLIKHLLTLREQLTPFHIQFV AE KLNFGSTRMALRKFIRHTP+LFRLS KNAL+ELTVDSIPTIDE QAR
Sbjct:  600 QDDIASFRPTPEDLDYPGMLLRAAKGGGTGDSLVNARTGP-GDQPSPSSPPSSGKGSAPAYTTWYPPLRSTLQVLSKVYRAVDMGVFEDLAQLSVAACAESLKKAAVSISAGVTAGSAPSPPVSSGGGGRGAPGGALAGGSVVPRXXXXXXXXXGSGEGGLDAQLFLIKHLLTLREQLTPFHIQFVHAEQKLNFGSTRMALRKFIRHTPALFRLSSKNALVELTVDSIPTIDEVQAR 835          
BLAST of mRNA_H-elongata_contig75210.15202.1 vs. uniprot
Match: A0A835YUG6_9STRA (Conserved oligomeric Golgi complex subunit 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUG6_9STRA)

HSP 1 Score: 120 bits (301), Expect = 1.300e-27
Identity = 87/228 (38.16%), Postives = 115/228 (50.44%), Query Frame = 0
Query:    1 QEEIANFRPTAE--HLDYPAVLERARAREDAAAKTLTAPKAETPTVEPPPGSVYSTWYPPLRSTLLVLSKVYRAVDMGVFEDLAQLAVAACAESMKRAAITISGGVINRSVALSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGGLDAQLFLIKHLLTLREQLTPFHIQFVRAEHKLNFGSTRMALRKFIRHTP--SLFRLSRKNALLELTVDSIPTIDEFQ 224
            Q ++A FRP  +   LDYPAVL RA A   AA                     Y TWYPP+R  LLVLSK+YR VDMGVFED+A       AE+++  A+T +     R+VA  +                                    LD  LFL+KHLLTLREQL PF I F+R + KLNF +T  ALR+  + +   +LFRLS +N L++   +S+P +DE +
Sbjct:  730 QRDVAQFRPREDGADLDYPAVLSRASAAAIAA---------------------YDTWYPPMRVGLLVLSKIYRVVDMGVFEDIA-------AETVR--AVTAALVAAGRAVAAHA----------------------------------SSLDGHLFLVKHLLTLREQLEPFDISFMRNDRKLNFSTTVSALRRLAQPSSGLALFRLSMQNVLIQTAKNSLPAVDEVE 893          
BLAST of mRNA_H-elongata_contig75210.15202.1 vs. uniprot
Match: A0A7S2SLN9_9STRA (Conserved oligomeric Golgi complex subunit 3 n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SLN9_9STRA)

HSP 1 Score: 111 bits (277), Expect = 1.360e-24
Identity = 67/173 (38.73%), Postives = 89/173 (51.45%), Query Frame = 0
Query:   50 SVYSTWYPPLRSTLLVLSKVYRAVDMGVFEDLAQLAVAACAESMKRAAITISGGVINRSVALSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGGLDAQLFLIKHLLTLREQLTPFHIQFVRAEHKLNFGSTRMALRKFIRHTPSLFRLSRKNALLELTVDSIPTIDE 222
            ++Y+ WYPPLRSTL++LSK+Y AV+  VFEDLA   V  C + +  AA  +S                                              G  D  LFLIKHLLTLREQLTPF I F + + +L+F STR AL +F+     +F ++R+NALL L  D +P +DE
Sbjct:   13 ALYAGWYPPLRSTLILLSKIYHAVENSVFEDLAGETVGLCTDVLGAAASRVSSL-------------------------------------------HGSEDGDLFLIKHLLTLREQLTPFDINFSQLKRRLDFSSTRQALSRFMAERGRVFAMTRQNALLSLAKDGLPQVDE 142          
BLAST of mRNA_H-elongata_contig75210.15202.1 vs. uniprot
Match: W7U7M5_9STRA (Conserved oligomeric Golgi complex subunit 3 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U7M5_9STRA)

HSP 1 Score: 108 bits (271), Expect = 4.970e-24
Identity = 66/172 (38.37%), Postives = 91/172 (52.91%), Query Frame = 0
Query:   51 VYSTWYPPLRSTLLVLSKVYRAVDMGVFEDLAQLAVAACAESMKRAAITISGGVINRSVALSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGGLDAQLFLIKHLLTLREQLTPFHIQFVRAEHKLNFGSTRMALRKFIRHTPSLFRLSRKNALLELTVDSIPTIDE 222
            VY+TW+P L+ TL +LSK+YRAV++ VF+++AQ A+AAC  S   AA  +                                              +G +DA LFL+KHLL LREQL PF I+F   E +L+F STR AL +F     +LFR+   NALL L + S+PT++E
Sbjct:  105 VYATWFPTLQMTLSLLSKIYRAVELHVFQEMAQQALAACTYSFLAAAKVLR-------------------------------------------EQKGDMDADLFLVKHLLILREQLVPFDIEFAAIEKRLDFNSTRGALTRFFVDRHNLFRMGTDNALLSLALGSVPTVNE 233          
BLAST of mRNA_H-elongata_contig75210.15202.1 vs. uniprot
Match: A0A6H5JQ09_9PHAE (Conserved oligomeric Golgi complex subunit 3 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ09_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 1.140e-23
Identity = 61/103 (59.22%), Postives = 72/103 (69.90%), Query Frame = 0
Query:    1 QEEIANFRPTAEHLDYPAVLERARAREDAAAKTLTAPKA---ETPTVEPPPGSV------YSTWYPPLRSTLLVLSKVYRAVDMGVFEDLAQLAVAACAESMK 94
            Q++IA+FRPT E LDYP +L RA AR    +  L   +    + P+   PP S       Y+TWYPPLRSTL VLSKVYRAVDMGVFEDLAQL+VAACAES+K
Sbjct:    7 QDDIASFRPTPEDLDYPGMLLRA-ARGGGTSDGLVNARTGAGDQPSPSSPPSSTKGSAPAYTTWYPPLRSTLQVLSKVYRAVDMGVFEDLAQLSVAACAESLK 108          
BLAST of mRNA_H-elongata_contig75210.15202.1 vs. uniprot
Match: A0A1Y1IEB9_KLENI (Conserved oligomeric Golgi complex subunit 3 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IEB9_KLENI)

HSP 1 Score: 101 bits (252), Expect = 4.120e-21
Identity = 71/224 (31.70%), Postives = 104/224 (46.43%), Query Frame = 0
Query:    1 QEEIANFRPTAEHLDYPAVLERARAREDAAAKTLTAPKAETPTVEPPPGSVYSTWYPPLRSTLLVLSKVYRAVDMGVFEDLAQLAVAACAESMKRAAITISGGVINRSVALSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGGLDAQLFLIKHLLTLREQLTPFHIQFVRAEHKLNFGSTRMALRKFIRHTPSLFRLSRKNALLELTVDSIPTIDEFQ 224
            ++EIAN+ PT + LDYPA LE+  + +    +   A +             Y+TWYPPL  TL  LSK+YR VD  +F  LAQ A++ C+ S++RA         ++S+A  +                                  G LD QLF++KHLL LREQ+ PF I F     +L+F      +R+ +R   S+F  S  N L+ +     P + E Q
Sbjct:  474 RDEIANYNPTPDDLDYPAKLEKVPSTQSEIQEEGAAGEDGQ--------DAYTTWYPPLERTLSCLSKLYRCVDHNIFTGLAQEAISLCSMSIQRA---------SKSIAKKA----------------------------------GSLDGQLFVVKHLLILREQIAPFDIDFAVTYKELDFSHMLEHMRRILRGQASIFAFSSSNGLVRVLSSGAPRVVENQ 646          
BLAST of mRNA_H-elongata_contig75210.15202.1 vs. uniprot
Match: A0A7S3XWF7_HETAK (Conserved oligomeric Golgi complex subunit 3 (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWF7_HETAK)

HSP 1 Score: 100 bits (249), Expect = 4.400e-21
Identity = 75/222 (33.78%), Postives = 100/222 (45.05%), Query Frame = 0
Query:    1 QEEIANFRPTAEHLDYPAVLERARAREDAAAKTLTAPKAETPTVEPPPGSVYSTWYPPLRSTLLVLSKVYRAVDMGVFEDLAQLAVAACAESMKRAAITISGGVINRSVALSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGGLDAQLFLIKHLLTLREQLTPFHIQFVRAEHKLNFGSTRMALRKFIRHTPSLFRLSRKNALLELTVDSIPTIDE 222
            +E++A   PT   LDYPA LERA A         TA  A+           +++WYPPLR+TL+VLSK+YR+V   VFEDLAQ A      ++  AA+ I+                                             +  +D  LFLIKHLL +REQLTPF IQF+  E  L+F +T  A   F+     L       A L+   D +P I+E
Sbjct:   97 EEDVALHEPTDAELDYPATLERAAA--------ATAGGADP----------FASWYPPLRATLMVLSKIYRSVGRAVFEDLAQQACLVTTHALAGAAVRITAK-------------------------------------------QSEIDGDLFLIKHLLIMREQLTPFDIQFLTVEKHLDFTATAAAFANFLARPTQLLS---PGAFLQFAQDGLPRINE 254          
BLAST of mRNA_H-elongata_contig75210.15202.1 vs. uniprot
Match: A0A7S4D880_HETAK (Conserved oligomeric Golgi complex subunit 3 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D880_HETAK)

HSP 1 Score: 100 bits (249), Expect = 8.040e-21
Identity = 75/222 (33.78%), Postives = 100/222 (45.05%), Query Frame = 0
Query:    1 QEEIANFRPTAEHLDYPAVLERARAREDAAAKTLTAPKAETPTVEPPPGSVYSTWYPPLRSTLLVLSKVYRAVDMGVFEDLAQLAVAACAESMKRAAITISGGVINRSVALSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGGLDAQLFLIKHLLTLREQLTPFHIQFVRAEHKLNFGSTRMALRKFIRHTPSLFRLSRKNALLELTVDSIPTIDE 222
            +E++A   PT   LDYPA LERA A         TA  A+           +++WYPPLR+TL+VLSK+YR+V   VFEDLAQ A      ++  AA+ I+                                             +  +D  LFLIKHLL +REQLTPF IQF+  E  L+F +T  A   F+     L       A L+   D +P I+E
Sbjct:   97 EEDVALHEPTDAELDYPATLERAAA--------ATAGGADP----------FASWYPPLRATLMVLSKIYRSVGRAVFEDLAQQACLVTTHALAGAAVRITAK-------------------------------------------QSEIDGDLFLIKHLLIMREQLTPFDIQFLTVEKHLDFTATAAAFANFLARPTQLLS---PGAFLQFAQDGLPRINE 254          
BLAST of mRNA_H-elongata_contig75210.15202.1 vs. uniprot
Match: A0A250WPT6_9CHLO (Conserved oligomeric Golgi complex subunit 3 n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WPT6_9CHLO)

HSP 1 Score: 100 bits (249), Expect = 1.050e-20
Identity = 78/238 (32.77%), Postives = 122/238 (51.26%), Query Frame = 0
Query:    1 QEEIANFRPTAEHLDYPAVLERARAREDA-------AAKTLTAPKA------ETPTVEPPPGSV-YSTWYPPLRSTLLVLSKVYRAVDMGVFEDLAQLAVAACAESMKRAAITISGGVINRSVALSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGGLDAQLFLIKHLLTLREQLTPFHIQFVRAEHKLNFGSTRMALRKFIRHTPSLFRLSRKNALLELTVDSIPTIDEFQ 224
            +EE+++F+P+AE LD+P  L+RA    DA         +++ AP+A      ++  V+  PG + Y+  Y P++STL+ LSK+YRAVD  +F  LAQ AV+AC  S+++AA         R VA  +                                  G LDAQLF I+HLL LREQ+ PF ++F  ++  L+F   R  +R+ +    SLF LS  NA++++     P +  ++
Sbjct:  509 KEEVSSFQPSAEDLDFPGKLQRAVVAADAENLNGYNVQESVVAPEAGQSNGHDSNGVDKSPGQIAYTLMYLPVQSTLMCLSKLYRAVDARIFSGLAQEAVSACTLSIQQAA---------RMVAQRA----------------------------------GPLDAQLFTIRHLLFLREQIAPFDVEFSASDIDLDFSHMRDHMRRILSGEVSLFALSSSNAVVKMLGTGGPRVLHYR 703          
BLAST of mRNA_H-elongata_contig75210.15202.1 vs. uniprot
Match: A0A067L2S6_JATCU (Conserved oligomeric Golgi complex subunit 3 n=2 Tax=Jatropha curcas TaxID=180498 RepID=A0A067L2S6_JATCU)

HSP 1 Score: 99.0 bits (245), Expect = 3.500e-20
Identity = 76/209 (36.36%), Postives = 102/209 (48.80%), Query Frame = 0
Query:    1 QEEIANFRPTAEHLDYPAVLERARAREDAAAKTLTAPKAETPTVEPPPGSVYSTWYPPLRSTLLVLSKVYRAVDMGVFEDLAQLAVAACAESMKRAAITISGGVINRSVALSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGGLDAQLFLIKHLLTLREQLTPFHIQFVRAEHKLNFGSTRMALRKFIRHTPSLFRLSRKNAL 209
            ++EIAN+ P+ E LDYPA LER+     A AKT +    ET         V++TWYPPL  TL +LSK+YR ++  VF  LAQ AV  C+ S+++A    S  V  ++ A+                                       D QLFLIKHLL LREQ+ PF I+F     +L+F      LR+ +R   SLF  SR  +L
Sbjct:  464 RDEIANYIPSDEDLDYPAKLERS-----AEAKTESTSVEET-------ADVFTTWYPPLEKTLSILSKLYRCLESSVFTGLAQEAVEVCSFSIQKA----SKLVAKKTTAM---------------------------------------DGQLFLIKHLLILREQIAPFDIEFSVTYKELDFSHLLEHLRRILRGQTSLFDWSRSTSL 617          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig75210.15202.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G064_ECTSI4.530e-7064.56Conserved oligomeric Golgi complex subunit 3 n=1 T... [more]
A0A835YUG6_9STRA1.300e-2738.16Conserved oligomeric Golgi complex subunit 3 n=1 T... [more]
A0A7S2SLN9_9STRA1.360e-2438.73Conserved oligomeric Golgi complex subunit 3 n=2 T... [more]
W7U7M5_9STRA4.970e-2438.37Conserved oligomeric Golgi complex subunit 3 n=1 T... [more]
A0A6H5JQ09_9PHAE1.140e-2359.22Conserved oligomeric Golgi complex subunit 3 n=1 T... [more]
A0A1Y1IEB9_KLENI4.120e-2131.70Conserved oligomeric Golgi complex subunit 3 n=1 T... [more]
A0A7S3XWF7_HETAK4.400e-2133.78Conserved oligomeric Golgi complex subunit 3 (Frag... [more]
A0A7S4D880_HETAK8.040e-2133.78Conserved oligomeric Golgi complex subunit 3 n=1 T... [more]
A0A250WPT6_9CHLO1.050e-2032.77Conserved oligomeric Golgi complex subunit 3 n=1 T... [more]
A0A067L2S6_JATCU3.500e-2036.36Conserved oligomeric Golgi complex subunit 3 n=2 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007265Conserved oligomeric Golgi complex, subunit 3PANTHERPTHR13302CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 3coord: 1..224

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig75210contigH-elongata_contig75210:623..2944 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig75210.15202.1mRNA_H-elongata_contig75210.15202.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig75210 623..2944 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig75210.15202.1 ID=prot_H-elongata_contig75210.15202.1|Name=mRNA_H-elongata_contig75210.15202.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=228bp
QEEIANFRPTAEHLDYPAVLERARAREDAAAKTLTAPKAETPTVEPPPGS
VYSTWYPPLRSTLLVLSKVYRAVDMGVFEDLAQLAVAACAESMKRAAITI
SGGVINRSVALSSGGGGAGGTRRSVAVAAAAGVSVGGGGDSIAGGGEGGL
DAQLFLIKHLLTLREQLTPFHIQFVRAEHKLNFGSTRMALRKFIRHTPSL
FRLSRKNALLELTVDSIPTIDEFQARV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007265COG_su3