prot_H-elongata_contig75192.15200.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig75192.15200.1
Unique Nameprot_H-elongata_contig75192.15200.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length100
Homology
BLAST of mRNA_H-elongata_contig75192.15200.1 vs. uniprot
Match: A0A6H5KJM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJM0_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 1.830e-22
Identity = 47/98 (47.96%), Postives = 66/98 (67.35%), Query Frame = 0
Query:    2 VGGTVLNGSTTTQHCVTLSTSEAEYVAMAQGAKAALFTKAVIDFLQSKLVNETIDLFEDNQGAIVTTENPISEGRTKHIDFFYHFIRELVECKVLSIQ 99
            VGGTV++  + TQ  V+LS++EAEY+A  +G K ALF +AV+ F+  +    +I + EDNQGAI   +NP+S GRTKHID  +HFIR L     +S+ 
Sbjct:  102 VGGTVVSHGSKTQSIVSLSSTEAEYIATGEGVKGALFVRAVLSFIAPETSGSSIQVLEDNQGAIALVQNPLSSGRTKHIDVRFHFIRGLFRSGNISVN 199          
BLAST of mRNA_H-elongata_contig75192.15200.1 vs. uniprot
Match: A0A6H5L267_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L267_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 3.420e-22
Identity = 47/98 (47.96%), Postives = 67/98 (68.37%), Query Frame = 0
Query:    2 VGGTVLNGSTTTQHCVTLSTSEAEYVAMAQGAKAALFTKAVIDFLQSKLVNETIDLFEDNQGAIVTTENPISEGRTKHIDFFYHFIRELVECKVLSIQ 99
            VGGTV++  + TQ  V+LS++EAEY+A  +G K ALF +AV+ F+  +    +I + EDNQGAI   +NP+S GRTKHID  YHFIR L     ++++
Sbjct:   97 VGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIQVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFGSGDIAVK 194          
BLAST of mRNA_H-elongata_contig75192.15200.1 vs. uniprot
Match: A0A6H5J853_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J853_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 6.400e-22
Identity = 47/98 (47.96%), Postives = 67/98 (68.37%), Query Frame = 0
Query:    2 VGGTVLNGSTTTQHCVTLSTSEAEYVAMAQGAKAALFTKAVIDFLQSKLVNETIDLFEDNQGAIVTTENPISEGRTKHIDFFYHFIRELVECKVLSIQ 99
            VGGTV++  + TQ  V LS++EAEY+A  +G K ALF + V+ F+  +    +I + EDNQGAIV  +NP+S GRTKHID  +HFIR L+    +S++
Sbjct:  162 VGGTVVSHGSKTQKIVCLSSTEAEYIAAGEGVKEALFVREVLSFVAPETSGSSIQVLEDNQGAIVLVQNPLSSGRTKHIDVRFHFIRGLLRSGDISVK 259          
BLAST of mRNA_H-elongata_contig75192.15200.1 vs. uniprot
Match: A0A6H5JTP8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTP8_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 1.530e-21
Identity = 47/97 (48.45%), Postives = 63/97 (64.95%), Query Frame = 0
Query:    2 VGGTVLNGSTTTQHCVTLSTSEAEYVAMAQGAKAALFTKAVIDFLQSKLVNETIDLFEDNQGAIVTTENPISEGRTKHIDFFYHFIRELVECKVLSI 98
            V G +++    TQ CV+LSTSEAEY+AM  G K ALF   ++ FL+       ID+FEDN+GAI   ENP+S  R+KHID  +HF+R L E  V+ +
Sbjct:  160 VAGCLVSWFAWTQKCVSLSTSEAEYIAMGDGVKEALFVNGMLQFLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEV 256          
BLAST of mRNA_H-elongata_contig75192.15200.1 vs. uniprot
Match: A0A6H5K9K6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9K6_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 1.570e-21
Identity = 48/98 (48.98%), Postives = 67/98 (68.37%), Query Frame = 0
Query:    2 VGGTVLNGSTTTQHCVTLSTSEAEYVAMAQGAKAALFTKAVIDFLQSKLVNETIDLFEDNQGAIVTTENPISEGRTKHIDFFYHFIRELVECKVLSIQ 99
            VGGTV++ ++ TQ  V+LSTSEAEY+A  +G K ALF +AV+ F+  +     I + EDNQGAI   +NP S  R+KHID  +HFIREL +   +S++
Sbjct:  241 VGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVE 338          
BLAST of mRNA_H-elongata_contig75192.15200.1 vs. uniprot
Match: A0A6H5KGN1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGN1_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 1.730e-21
Identity = 48/98 (48.98%), Postives = 67/98 (68.37%), Query Frame = 0
Query:    2 VGGTVLNGSTTTQHCVTLSTSEAEYVAMAQGAKAALFTKAVIDFLQSKLVNETIDLFEDNQGAIVTTENPISEGRTKHIDFFYHFIRELVECKVLSIQ 99
            VGGTV++  + TQ  V+LS++EAEY+A  +G K ALF +AV+ F+  +    +I + EDNQGAI   +NP+S GRTKHID  YHFIR L     +S++
Sbjct:  724 VGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIQVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVK 821          
BLAST of mRNA_H-elongata_contig75192.15200.1 vs. uniprot
Match: A0A6H5JU90_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU90_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 2.360e-21
Identity = 48/98 (48.98%), Postives = 67/98 (68.37%), Query Frame = 0
Query:    2 VGGTVLNGSTTTQHCVTLSTSEAEYVAMAQGAKAALFTKAVIDFLQSKLVNETIDLFEDNQGAIVTTENPISEGRTKHIDFFYHFIRELVECKVLSIQ 99
            VGGTV++  + TQ  V+LS++EAEY+A  +G K ALF +AV+ F+  +    +I + EDNQGAI   +NP+S GRTKHID  YHFIR L     +S++
Sbjct:  725 VGGTVVSHGSKTQSMVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVK 822          
BLAST of mRNA_H-elongata_contig75192.15200.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 2.400e-21
Identity = 48/98 (48.98%), Postives = 67/98 (68.37%), Query Frame = 0
Query:    2 VGGTVLNGSTTTQHCVTLSTSEAEYVAMAQGAKAALFTKAVIDFLQSKLVNETIDLFEDNQGAIVTTENPISEGRTKHIDFFYHFIRELVECKVLSIQ 99
            VGGTV++  + TQ  V+LS++EAEY+A  +G K ALF +AV+ F+  +    +I + EDNQGAI   +NP+S GRTKHID  YHFIR L     +S++
Sbjct: 1116 VGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVK 1213          
BLAST of mRNA_H-elongata_contig75192.15200.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 2.420e-21
Identity = 48/98 (48.98%), Postives = 67/98 (68.37%), Query Frame = 0
Query:    2 VGGTVLNGSTTTQHCVTLSTSEAEYVAMAQGAKAALFTKAVIDFLQSKLVNETIDLFEDNQGAIVTTENPISEGRTKHIDFFYHFIRELVECKVLSIQ 99
            VGGTV++  + TQ  V+LS++EAEY+A  +G K ALF +AV+ F+  +    +I + EDNQGAI   +NP+S GRTKHID  YHFIR L     +S++
Sbjct: 1495 VGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVK 1592          
BLAST of mRNA_H-elongata_contig75192.15200.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 2.420e-21
Identity = 48/98 (48.98%), Postives = 67/98 (68.37%), Query Frame = 0
Query:    2 VGGTVLNGSTTTQHCVTLSTSEAEYVAMAQGAKAALFTKAVIDFLQSKLVNETIDLFEDNQGAIVTTENPISEGRTKHIDFFYHFIRELVECKVLSIQ 99
            VGGTV++  + TQ  V+LS++EAEY+A  +G K ALF +AV+ F+  +    +I + EDNQGAI   +NP+S GRTKHID  YHFIR L     +S++
Sbjct: 1515 VGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVK 1612          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig75192.15200.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJM0_9PHAE1.830e-2247.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L267_9PHAE3.420e-2247.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J853_9PHAE6.400e-2247.96Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JTP8_9PHAE1.530e-2148.45Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9K6_9PHAE1.570e-2148.98Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KGN1_9PHAE1.730e-2148.98Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JU90_9PHAE2.360e-2148.98Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KSG8_9PHAE2.400e-2148.98Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JZQ8_9PHAE2.420e-2148.98Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN00_9PHAE2.420e-2148.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 3..92
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 3..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig75192contigH-elongata_contig75192:797..1096 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig75192.15200.1mRNA_H-elongata_contig75192.15200.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig75192 308..1701 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig75192.15200.1 ID=prot_H-elongata_contig75192.15200.1|Name=mRNA_H-elongata_contig75192.15200.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=100bp
MVGGTVLNGSTTTQHCVTLSTSEAEYVAMAQGAKAALFTKAVIDFLQSKL
VNETIDLFEDNQGAIVTTENPISEGRTKHIDFFYHFIRELVECKVLSIQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like