mRNA_H-elongata_contig75156.15195.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-elongata_contig75156.15195.1
Unique Name	mRNA_H-elongata_contig75156.15195.1
Type	mRNA
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)

Homology

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BLAST of mRNA_H-elongata_contig75156.15195.1 vs. uniprot
Match: A0A6H5KQ87_9PHAE (ABC protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ87_9PHAE)

HSP 1 Score: 389 bits (998), Expect = 3.460e-124
Identity = 201/271 (74.17%), Postives = 220/271 (81.18%), Query Frame = 1

Query:    1 VTSGVAFVAGRDVLGDMANIRRNLGVCPQHDILYPDLTVREHLRMYAVLKGVPGSRLQEAISTTLSDVGLTEKMNERTKTLSGGQKRKLSVGIALIGGSKIVFLDEPTSGMDPHSRRFTWDLIRKNRDGRVIVLTTHFMDEADLLGDRVAIMADGALRCCGSSLFLKNHYGVGY------------------TPLLFASR--------------QKENVKPIKHLVRSHVMEATILSNVGAEVSFQLPNDASGAFEAMLTEIDVRKAELGI 717
            VTSG AFVAGRDV+ DMANIRR+LGVCPQHDILYPDLTVREHLRMYAVLK VP +RLQ+ I+ TL+DVGLTEK N+ T TLSGGQKRKLSVGIALIGGSK+VFLDEPTSGMDPHSRRFTWDLIRKNR+GRVIVLTTHFMDEADLLGDRVAIMADGALRCCGSS+FLKNHYGVGY                  T    +S+              Q++ VKPIKHLVRSHV EAT+LSNVGAEVSFQLPNDAS +F+ ML+EID RK ELG+
Sbjct:  575 VTSGSAFVAGRDVIADMANIRRSLGVCPQHDILYPDLTVREHLRMYAVLKSVPRARLQQTITATLNDVGLTEKENQLTTTLSGGQKRKLSVGIALIGGSKVVFLDEPTSGMDPHSRRFTWDLIRKNREGRVIVLTTHFMDEADLLGDRVAIMADGALRCCGSSIFLKNHYGVGYNLTIVRDIQGAATAAADPTAAAMSSQGGNDNEQGVNTTATQEQGVKPIKHLVRSHVKEATLLSNVGAEVSFQLPNDASSSFQGMLSEIDSRKTELGV 845

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BLAST of mRNA_H-elongata_contig75156.15195.1 vs. uniprot
Match: D8LFQ4_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFQ4_ECTSI)

HSP 1 Score: 382 bits (981), Expect = 1.980e-122
Identity = 200/273 (73.26%), Postives = 214/273 (78.39%), Query Frame = 1

Query:    1 VTSGVAFVAGRDVLGDMANIRRNLGVCPQHDILYPDLTVREHLRMYAVLKGVPGSRLQEAISTTLSDVGLTEKMNERTKTLSGGQKRKLSVGIALIGGSKIVFLDEPTSGMDPHSRRFTWDLIRKNRDGRVIVLTTHFMDEADLLGDRVAIMADGALRCCGSSLFLKNHYGVGYTPLLF--------------------------------ASRQKENVKPIKHLVRSHVMEATILSNVGAEVSFQLPNDASGAFEAMLTEIDVRKAELGITR 723
            VTSG AFVAGRDV  DM +IR +LGVCPQHDILYPDLTVREHLRMYAVLK VP S LQEAI+ TL+DVGLTEK NE T TLSGGQKRKLSVGIALIGGSK+VFLDEPTSGMDPHSRRFTWDLIRKNR+GRVIVLTTHFMDEADLLGDRVAIMADGALRCCGSS+FLKNHYGVGY   +                                  + Q+  VKPIK LVRSHV  AT+LSNVGAEVSFQLPNDAS +F+ MLTEID RKAELG+ R
Sbjct:  720 VTSGSAFVAGRDVNTDMVSIRNSLGVCPQHDILYPDLTVREHLRMYAVLKSVPSSELQEAITNTLNDVGLTEKENELTTTLSGGQKRKLSVGIALIGGSKVVFLDEPTSGMDPHSRRFTWDLIRKNREGRVIVLTTHFMDEADLLGDRVAIMADGALRCCGSSIFLKNHYGVGYNLTIVREIQGAESDMKPAFESGTSAEGKIDEDIGVNNTAAQEAGVKPIKRLVRSHVKAATLLSNVGAEVSFQLPNDASPSFQGMLTEIDSRKAELGVNR 992

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BLAST of mRNA_H-elongata_contig75156.15195.1 vs. uniprot
Match: D7FZE9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZE9_ECTSI)

HSP 1 Score: 390 bits (1003), Expect = 1.390e-121
Identity = 201/271 (74.17%), Postives = 218/271 (80.44%), Query Frame = 1

Query:    1 VTSGVAFVAGRDVLGDMANIRRNLGVCPQHDILYPDLTVREHLRMYAVLKGVPGSRLQEAISTTLSDVGLTEKMNERTKTLSGGQKRKLSVGIALIGGSKIVFLDEPTSGMDPHSRRFTWDLIRKNRDGRVIVLTTHFMDEADLLGDRVAIMADGALRCCGSSLFLKNHYGVGYTPLLF--------------------------------ASRQKENVKPIKHLVRSHVMEATILSNVGAEVSFQLPNDASGAFEAMLTEIDVRKAELGI 717
            VTSG AFVAGRDV+ DMANIRR+LGVCPQHDILYPDLTVREHLRMYAVLK VP +RLQ+ I+ TL+DVGLTEK NE T TLSGGQKRKLSVGIALIGGSK+VFLDEPTSGMDPHSRRFTWDLIRKNR+GRVIVLTTHFMDEADLLGDRVAIMADGALRCCGSS+FLKNHYGVGY   +                                  + Q++ VKPIKHLVRSHV EAT+LSNVGAEVSFQLPNDAS +F+ MLTEID RK ELG+
Sbjct:  751 VTSGSAFVAGRDVIADMANIRRSLGVCPQHDILYPDLTVREHLRMYAVLKSVPRARLQQTITATLNDVGLTEKENELTTTLSGGQKRKLSVGIALIGGSKVVFLDEPTSGMDPHSRRFTWDLIRKNREGRVIVLTTHFMDEADLLGDRVAIMADGALRCCGSSIFLKNHYGVGYNLTIVRDIQGADTAAADPTAAAISSEEENDNEQGVNTTATQEQGVKPIKHLVRSHVKEATLLSNVGAEVSFQLPNDASSSFQDMLTEIDSRKTELGV 1021

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BLAST of mRNA_H-elongata_contig75156.15195.1 vs. uniprot
Match: A0A6H5KPW7_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPW7_9PHAE)

HSP 1 Score: 376 bits (965), Expect = 2.660e-121
Identity = 197/272 (72.43%), Postives = 213/272 (78.31%), Query Frame = 1

Query:    1 VTSGVAFVAGRDVLGDMANIRRNLGVCPQHDILYPDLTVREHLRMYAVLKGVPGSRLQEAISTTLSDVGLTEKMNERTKTLSGGQKRKLSVGIALIGGSKIVFLDEPTSGMDPHSRRFTWDLIRKNRDGRVIVLTTHFMDEADLLGDRVAIMADGALRCCGSSLFLKNHYGVGYTPLLF---------------------------------ASRQKENVKPIKHLVRSHVMEATILSNVGAEVSFQLPNDASGAFEAMLTEIDVRKAELGI 717
            VTSG AFVAGRDV  DM +IR +LGVCPQHDILYPDLTVREHLRMYAVLK VP S LQEAI+ TL+DVGLTEK N+ T TLSGGQKRKLSVGIALIGGSK+VFLDEPTSGMDPHSRRFTWDLIRKNR+GRVIVLTTHFMDEADLLGDRVAIMADGALRCCGSS+FLKN+YGVGY   +                                   + Q+  VKPIK LVRSHV EAT+LSNVGAEVSFQLPN AS +F+ MLTEID RKAELG+
Sbjct:  590 VTSGSAFVAGRDVKTDMVSIRNSLGVCPQHDILYPDLTVREHLRMYAVLKSVPSSELQEAITNTLNDVGLTEKENQLTTTLSGGQKRKLSVGIALIGGSKVVFLDEPTSGMDPHSRRFTWDLIRKNREGRVIVLTTHFMDEADLLGDRVAIMADGALRCCGSSIFLKNYYGVGYNLTIVREIQGAEFDMKPAFESGMDAEGKIDEADIGVNNTAAQEAGVKPIKRLVRSHVKEATLLSNVGAEVSFQLPNAASPSFQGMLTEIDSRKAELGV 861

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BLAST of mRNA_H-elongata_contig75156.15195.1 vs. uniprot
Match: D7FZE8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZE8_ECTSI)

HSP 1 Score: 378 bits (970), Expect = 4.160e-117
Identity = 198/272 (72.79%), Postives = 213/272 (78.31%), Query Frame = 1

Query:    1 VTSGVAFVAGRDVLGDMANIRRNLGVCPQHDILYPDLTVREHLRMYAVLKGVPGSRLQEAISTTLSDVGLTEKMNERTKTLSGGQKRKLSVGIALIGGSKIVFLDEPTSGMDPHSRRFTWDLIRKNRDGRVIVLTTHFMDEADLLGDRVAIMADGALRCCGSSLFLKNHYGVGYTPLLF---------------------------------ASRQKENVKPIKHLVRSHVMEATILSNVGAEVSFQLPNDASGAFEAMLTEIDVRKAELGI 717
            VTSG AFVAGRDV  DM +IR +LGVCPQHDILYPDLTVREHLRMYAVLK VP S LQEAI+ TL+DVGLTEK NE T TLSGGQKRKLSVGIALIGGSK+VFLDEPTSGMDPHSRRFTWDLIRKNR+GRVIVLTTHFMDEADLLGDRVAIMADGALRCCGSS+FLKN+YGVGY   +                                   + Q+  VKPIK LVRSHV  AT+LSNVGAEVSFQLPNDAS +F+ MLTEID RKAELG+
Sbjct:  729 VTSGSAFVAGRDVKTDMVSIRNSLGVCPQHDILYPDLTVREHLRMYAVLKSVPSSELQEAITNTLNDVGLTEKENELTTTLSGGQKRKLSVGIALIGGSKVVFLDEPTSGMDPHSRRFTWDLIRKNREGRVIVLTTHFMDEADLLGDRVAIMADGALRCCGSSIFLKNYYGVGYNLTIVREIQGAESDMKPAFESGMNAEEKIDEEDIGVNNTAAQEAGVKPIKRLVRSHVKAATLLSNVGAEVSFQLPNDASPSFQGMLTEIDSRKAELGV 1000

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BLAST of mRNA_H-elongata_contig75156.15195.1 vs. uniprot
Match: A0A6H5JS94_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS94_9PHAE)

HSP 1 Score: 343 bits (879), Expect = 4.830e-107
Identity = 179/271 (66.05%), Postives = 203/271 (74.91%), Query Frame = 1

Query:    4 TSGVAFVAGRDVLGDMANIRRNLGVCPQHDILYPDLTVREHLRMYAVLKGVPGSRLQEAISTTLSDVGLTEKMNERTKTLSGGQKRKLSVGIALIGGSKIVFLDEPTSGMDPHSRRFTWDLIRKNRDGRVIVLTTHFMDEADLLGDRVAIMADGALRCCGSSLFLKNHYGVGY---------------------------------TPLLFASRQKENVKPIKHLVRSHVMEATILSNVGAEVSFQLPNDASGAFEAMLTEIDVRKAELGI 717
            T G AF+AGRD   DM+NIR++LGVCPQHDILYP LTV+EHLR+YAVLKGVP + L EA+  TL DVGLTEK NE+TKTLSGGQKRKLSVGIALIG SK+VFLDEPTSGMDPHSRRFTWDLIRKNR+GRV+VLTTHFMDEADLLGDRVAIMADG L+CCGSSLFLK HYGVGY                                 TP     +    V PIK +VRSHV  + +LS+VGAE+SFQLP++AS +F+ ML E+D RK ELGI
Sbjct:  523 TEGNAFIAGRDANKDMSNIRKSLGVCPQHDILYPTLTVKEHLRLYAVLKGVPHANLGEALKKTLLDVGLTEKENEKTKTLSGGQKRKLSVGIALIGDSKVVFLDEPTSGMDPHSRRFTWDLIRKNREGRVVVLTTHFMDEADLLGDRVAIMADGMLKCCGSSLFLKKHYGVGYNLTVVRGIEGDSPSSTNGKEGGNGVSESKLEEGTPHHENDKSHLQVGPIKAVVRSHVKGSVLLSDVGAELSFQLPSEASSSFKGMLLEMDDRKEELGI 793

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BLAST of mRNA_H-elongata_contig75156.15195.1 vs. uniprot
Match: D7FZA6_ECTSI (ATP-binding Cassette (ABC) Superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA6_ECTSI)

HSP 1 Score: 348 bits (892), Expect = 1.540e-106
Identity = 182/271 (67.16%), Postives = 204/271 (75.28%), Query Frame = 1

Query:    4 TSGVAFVAGRDVLGDMANIRRNLGVCPQHDILYPDLTVREHLRMYAVLKGVPGSRLQEAISTTLSDVGLTEKMNERTKTLSGGQKRKLSVGIALIGGSKIVFLDEPTSGMDPHSRRFTWDLIRKNRDGRVIVLTTHFMDEADLLGDRVAIMADGALRCCGSSLFLKNHYGVGY---------------------------------TPLLFASRQKENVKPIKHLVRSHVMEATILSNVGAEVSFQLPNDASGAFEAMLTEIDVRKAELGI 717
            T G AF+AGRD   DM+NIR++LGVCPQHDILYP LTV+EHLR+YAVLKGVP + L EAI  TL DVGLTEK NE+TKTLSGGQKRKLSVGIALIGGSK+VFLDEPTSGMDPHSRRFTWDLIRKNR+GRV+VLTTHFMDEADLLGDRVAIMADG L+CCGSSLFLK HYGVGY                                 TP     +    V PIK LVRSHV  + +LS+VGAE+SFQLP++AS +F+ ML E+D RK ELGI
Sbjct:  746 TEGSAFIAGRDANEDMSNIRKSLGVCPQHDILYPTLTVKEHLRLYAVLKGVPHADLGEAIKKTLLDVGLTEKENEKTKTLSGGQKRKLSVGIALIGGSKVVFLDEPTSGMDPHSRRFTWDLIRKNREGRVVVLTTHFMDEADLLGDRVAIMADGMLKCCGSSLFLKKHYGVGYNLTVVRGIEGDSPSSPNGQEGGNAVSESKLEEGTPRHENDKSHLQVGPIKALVRSHVKASVLLSDVGAELSFQLPSEASSSFKGMLLEMDDRKEELGI 1016

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BLAST of mRNA_H-elongata_contig75156.15195.1 vs. uniprot
Match: A0A7S3XYR3_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYR3_HETAK)

HSP 1 Score: 308 bits (788), Expect = 1.510e-92
Identity = 164/283 (57.95%), Postives = 189/283 (66.78%), Query Frame = 1

Query:    4 TSGVAFVAGRDVLGDMANIRRNLGVCPQHDILYPDLTVREHLRMYAVLKGVPGSRLQEAISTTLSDVGLTEKMNERTKTLSGGQKRKLSVGIALIGGSKIVFLDEPTSGMDPHSRRFTWDLIRKNRDGRVIVLTTHFMDEADLLGDRVAIMADGALRCCGSSLFLKNHYGVGYTPLLFAS-------------RQKENVKPIKH--------------------------------LVRSHVMEATILSNVGAEVSFQLPNDASGAFEAMLTEIDVRKAELGI 717
            T G AF+ GRDV   M  IRR LGVCPQHDILYPDLTVREHLRMYAV KGVP + L+ A+   + +VGLTEK N++ K+LSGGQKRKLSVGIA IG SK+VFLDEPTSGMDP+SRRFTWD+IR+NR+GRVIVLTTHFMDEADLLGDRVAIMADG LRCCG+SLFLK+ +GVGY   L                 + +   P K                                 LVR H   AT+LSNVGAE+SFQLP DAS AF+ +L  +D   A LG+
Sbjct:  724 TGGAAFIQGRDVFTQMKFIRRTLGVCPQHDILYPDLTVREHLRMYAVFKGVPRAALKGAVEKMIVEVGLTEKRNKKAKSLSGGQKRKLSVGIAFIGDSKVVFLDEPTSGMDPYSRRFTWDVIRRNREGRVIVLTTHFMDEADLLGDRVAIMADGQLRCCGTSLFLKSRFGVGYNLTLVKKMRPPPSQAALNPLHEGKEEDPAKQDXXXXXXXXXXXXDQQLALQGQSLCDEEGLVALVRGHAPSATLLSNVGAEISFQLPTDASAAFKPLLNHLDRELAGLGV 1006

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BLAST of mRNA_H-elongata_contig75156.15195.1 vs. uniprot
Match: A0A7S4D9H3_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D9H3_HETAK)

HSP 1 Score: 304 bits (779), Expect = 2.450e-91
Identity = 162/266 (60.90%), Postives = 189/266 (71.05%), Query Frame = 1

Query:    4 TSGVAFVAGRDVLGDMANIRRNLGVCPQHDILYPDLTVREHLRMYAVLKGVPGSRLQEAISTTLSDVGLTEKMNERTKTLSGGQKRKLSVGIALIGGSKIVFLDEPTSGMDPHSRRFTWDLIRKNRDGRVIVLTTHFMDEADLLGDRVAIMADGALRCCGSSLFLKNHYGVGYTPLLFAS--RQKE------------------NVKP--------IKHLVRSHVMEATILSNVGAEVSFQLPNDASGAFEAMLTEIDVRKAELGI 717
            T G AF+ GRDV   M  IRR LGVCPQHDILYPDLTVREHLRMYAV KGVP + L+ A+   + +VGLTEK N++ K+LSGGQKRKLSVGIA IG SK+VFLDEPTSGMDP+SRRFTWD+IR+NR+GRVIVLTTHFMDEADLLGDRVAI+ +G LRCCGSSLFLK+ +G GY   L     R+KE                  N  P        I  LV  HV  A +LSNVGAE+SFQLP ++S  F ++  E+D R  +LGI
Sbjct:  724 TGGAAFIQGRDVFTQMKFIRRTLGVCPQHDILYPDLTVREHLRMYAVFKGVPRAALKGAVEKMIVEVGLTEKRNKKAKSLSGGQKRKLSVGIAFIGDSKVVFLDEPTSGMDPYSRRFTWDVIRRNREGRVIVLTTHFMDEADLLGDRVAIVGEGRLRCCGSSLFLKSRFGAGYNLTLVKQFEREKEVESKEEASPAPEARIPPHNTSPATCNKDKEILDLVAHHVGGAKLLSNVGAEMSFQLPQESSKNFPSLFFELDERLPDLGI 989

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BLAST of mRNA_H-elongata_contig75156.15195.1 vs. uniprot
Match: A0A1V9YT02_9STRA (ATP-binding Cassette (ABC) Superfamily (Fragment) n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YT02_9STRA)

HSP 1 Score: 273 bits (699), Expect = 9.010e-84
Identity = 139/238 (58.40%), Postives = 175/238 (73.53%), Query Frame = 1

Query:    4 TSGVAFVAGRDVLGDMANIRRNLGVCPQHDILYPDLTVREHLRMYAVLKGVPGSRLQEAISTTLSDVGLTEKMNERTKTLSGGQKRKLSVGIALIGGSKIVFLDEPTSGMDPHSRRFTWDLIRKNRDGRVIVLTTHFMDEADLLGDRVAIMADGALRCCGSSLFLKNHYGVGYTPLLFASRQKENVKPIKHLVRSHVMEATILSNVGAEVSFQLPNDASGAFEAMLTEIDVRKAELGI 717
            T G A+V G+ +  DM  +R ++GVCPQHD+LY +LTVREHL +YA LK VP +  Q  I   L++VGLTEK +  T  LSGGQKRKLSV IAL+G S++VFLDEPTSGMDP+SRRFTW+++++NR+ RV+VLTTHFMDEADLLGDR+ I+ADG L C GSSLFLK+ YG GY  L    R   +V  +   VR+HV +A +LSNVGAEV  QLP+ ASG F A+L  +D     LG+
Sbjct:   63 TKGTAYVFGQTITADMDALRASMGVCPQHDVLYDELTVREHLALYAALKAVPDAAAQ--IDALLAEVGLTEKRHVATAKLSGGQKRKLSVAIALLGQSRVVFLDEPTSGMDPYSRRFTWNVLQRNRENRVMVLTTHFMDEADLLGDRIVILADGRLCCAGSSLFLKHLYGTGYN-LTLVKRDGCDVAAVVAFVRAHVADANVLSNVGAEVVLQLPSAASGGFPALLHALDGALPTLGV 297

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig75156.15195.1 vs. uniprot

BLAST of mRNA_H-elongata_contig75156.15195.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KQ87_9PHAE	3.460e-124	74.17	ABC protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP...	[more]
D8LFQ4_ECTSI	1.980e-122	73.26	ABC transporter domain-containing protein n=1 Tax=...	[more]
D7FZE9_ECTSI	1.390e-121	74.17	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KPW7_9PHAE	2.660e-121	72.43	ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta...	[more]
D7FZE8_ECTSI	4.160e-117	72.79	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JS94_9PHAE	4.830e-107	66.05	ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta...	[more]
D7FZA6_ECTSI	1.540e-106	67.16	ATP-binding Cassette (ABC) Superfamily n=1 Tax=Ect...	[more]
A0A7S3XYR3_HETAK	1.510e-92	57.95	Hypothetical protein n=2 Tax=Heterosigma akashiwo ...	[more]
A0A7S4D9H3_HETAK	2.450e-91	60.90	Hypothetical protein n=2 Tax=Heterosigma akashiwo ...	[more]
A0A1V9YT02_9STRA	9.010e-84	58.40	ATP-binding Cassette (ABC) Superfamily (Fragment) ...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig75156	contig	H-elongata_contig75156:3..2057 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	390.6
Seed ortholog evalue	5.6e-106
Seed eggNOG ortholog	2880.D7FZE9
KEGG ko	ko:K05643,ko:K05645
KEGG TC	3.A.1.211
KEGG Pathway	ko02010,map02010
GOs	GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006810,GO:0006869,GO:0008150,GO:0009653,GO:0010876,GO:0015399,GO:0015405,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0030587,GO:0031288,GO:0032502,GO:0033036,GO:0042623,GO:0042626,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044424,GO:0044464,GO:0048856,GO:0051179,GO:0051234,GO:0051703,GO:0051704,GO:0055085,GO:0071702,GO:0090702,GO:0099120
EggNOG free text desc.	ATPase activity, coupled to transmembrane movement of substances
EggNOG OGs	COG1131@1,KOG0059@2759
COG Functional cat.	V
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko02000
Hectar predicted targeting category	other localisation
Exons	4
Model size	750
Cds size	750
Stop	1
Start	0

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig75156.15195.1	prot_H-elongata_contig75156.15195.1	Himanthalia elongata Himel1 dioecious	polypeptide	H-elongata_contig75156 3..2057 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622931156.683864-CDS-H-elongata_contig75156:2..188	1622931156.683864-CDS-H-elongata_contig75156:2..188	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig75156 3..188 +
1691679721.5756931-CDS-H-elongata_contig75156:2..188	1691679721.5756931-CDS-H-elongata_contig75156:2..188	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig75156 3..188 +
1622931156.7039723-CDS-H-elongata_contig75156:570..728	1622931156.7039723-CDS-H-elongata_contig75156:570..728	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig75156 571..728 +
1691679721.5871546-CDS-H-elongata_contig75156:570..728	1691679721.5871546-CDS-H-elongata_contig75156:570..728	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig75156 571..728 +
1622931156.721386-CDS-H-elongata_contig75156:977..1151	1622931156.721386-CDS-H-elongata_contig75156:977..1151	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig75156 978..1151 +
1691679721.5978885-CDS-H-elongata_contig75156:977..1151	1691679721.5978885-CDS-H-elongata_contig75156:977..1151	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig75156 978..1151 +
1622931156.7357311-CDS-H-elongata_contig75156:1825..2057	1622931156.7357311-CDS-H-elongata_contig75156:1825..2057	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig75156 1826..2057 +
1691679721.6059103-CDS-H-elongata_contig75156:1825..2057	1691679721.6059103-CDS-H-elongata_contig75156:1825..2057	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig75156 1826..2057 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-elongata_contig75156:3..2057+
coding sequence from alignment at H-elongata_contig75156:3..2057+

protein sequence of mRNA_H-elongata_contig75156.15195.1

>prot_H-elongata_contig75156.15195.1 ID=prot_H-elongata_contig75156.15195.1|Name=mRNA_H-elongata_contig75156.15195.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=250bp
VTSGVAFVAGRDVLGDMANIRRNLGVCPQHDILYPDLTVREHLRMYAVLK
GVPGSRLQEAISTTLSDVGLTEKMNERTKTLSGGQKRKLSVGIALIGGSK
IVFLDEPTSGMDPHSRRFTWDLIRKNRDGRVIVLTTHFMDEADLLGDRVA
IMADGALRCCGSSLFLKNHYGVGYTPLLFASRQKENVKPIKHLVRSHVME
ATILSNVGAEVSFQLPNDASGAFEAMLTEIDVRKAELGITRCEEAADPY*

mRNA from alignment at H-elongata_contig75156:3..2057+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-elongata_contig75156.15195.1 ID=mRNA_H-elongata_contig75156.15195.1|Name=mRNA_H-elongata_contig75156.15195.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2055bp|location=Sequence derived from alignment at H-elongata_contig75156:3..2057+ (Himanthalia elongata Himel1 dioecious)
GTGACGTCGGGTGTAGCGTTCGTGGCCGGACGGGATGTTCTCGGCGACAT
GGCCAACATTCGGCGTAACCTGGGTGTGTGCCCGCAGCATGACATCCTTT
ACCCCGATCTTACGGTCAGGGAGCACCTGCGTATGTACGCCGTACTCAAG
GGGGTGCCTGGATCGCGGCTTCAAGAGGCCATTTCGGTGAGCGACCGAAG
TTTAATGTATTTTTTGGCGGAGATGAGTAACATGGAAAATTCACATCGTG
GCACAACTGAACGTTCGTGAAATCGATGTAACAATTGCCACCTTGTTCAC
GCTCAGCTAGATCATTCCTCAGGTTTGGCCGCGGTCGTCATTGATACAAT
GATCCAAGCCGCGGCCAATCAGTCGATGGGTGGGCGGGCGAACGGGGGAA
GCGGACGGGACGTACTCAAGTTCTGTACGCCTTAGCTGTTTGACCATTCA
AATATTTTTTATCAAAGCGTTGCCGAAGTATCGTAATGGCTTGAGTAAAT
AGATCTGTGGTGTGTACATCCGATTAAATCCCACCGCATCTCTTGGGCTT
CGATGACTATACGTGAAGACCACCCTATCGGACGTGGGCCTCACGGAGAA
AATGAACGAGCGTACGAAGACTCTCTCCGGGGGACAAAAGAGAAAACTGT
CGGTGGGCATAGCCCTCATCGGCGGTTCGAAGATTGTCTTCCTAGACGAG
CCTACATCAGGGATGGACCCCCACAGGTGGGCAAGAATGACCATCGGGAG
ATTGAATATTAAGGGAGGGGGGTTTTGGAACGCCTTTGCATACACTACAC
ACTAACGTGAGGCGGAAGTTTGCATTTGTTGAATCTAGCGGTGAAAATAG
TAACTTGTCGTGGCCTCCGAACCCGAGATTGCGCGTCTCATCCAATACCT
GTATTTTCCTTCCACATCTAAAGAAAATCCCGTTTCATATCATGCCGTAC
CATGCCATACCGTGCCGTGGTTCAGCCGTCGGTTCACGTGGGATCTTATC
CGCAAGAATCGCGACGGGCGCGTGATCGTACTAACGACCCATTTTATGGA
CGAGGCTGACCTGCTCGGAGACCGTGTGGCGATCATGGCCGATGGAGCGC
TCCGATGTTGTGGAAGCTCGCTCTTCCTGAAGAACCACTACGGGGTTGGG
TAAGTTCGGGCCTCCGGAGGAGTACTGGTGGTCTAGTAATAGTGGGGGTG
TGCGCTGGCTGATTGCGAACAACGAGGGTTATGTTCGTATAATTCAACCA
TCAAAGCACTTACGTTGCTTTCGTCCACGTTGAAACGGATCGCTACCCAC
ACTTTCGGGCTATCGATGTTTCGCCTTGGGGTATATTGAGTCGACTAAGA
GTGGCATGTTTTGTTATTTGCTGGAATCCGTTCGTGCGTCAAAGATACAA
TCTTACGATCGTTCGGGACATCAAGGGGTCGGATGGTGCCTTCCCGGCGT
TCGAGACTGGTATAGATGACGAAAAGGCAGACGAGGAGACTGGATTCAAC
ACCACCGAGAATCAGGTCAGTTAAAGGCTTACTGGTTAAGGAATGTGGGC
AAGGGTTGCGTAACTGATTTGTCCTATATCTTAATGTTTCTGGCTTACGA
GAGTGTGTATTGGGTGCTGACGATCACGGAGGATAAATCCTGGATTGTTA
TTTCTGTAGTTGATACTTTTATTTGAATTGACGACCAGCTTCAGGTTTTG
GGTGTGCCACACGCTGCGGAGTTGCCGTCGTTTTTGCTGCGCCGCATTAT
GAGGTCGCCAGTACTGCTGTCACTGCCATCACGAGGATGGGCATTGAAAT
ACGCCGTGGTTTTCCATCTTCAGTTACACTCCCCTCCTTTTCGCCTCACG
ACAGAAAGAGAACGTGAAGCCCATTAAGCACCTGGTGCGGTCGCACGTCA
TGGAGGCCACCATACTCAGCAACGTAGGCGCGGAGGTGTCCTTCCAGCTT
CCCAACGACGCATCAGGCGCTTTCGAAGCAATGCTCACCGAAATTGACGT
TCGTAAGGCCGAGCTCGGCATCACTAGGTGCGAGGAGGCCGCAGATCCAT
ATTGA

Coding sequence (CDS) from alignment at H-elongata_contig75156:3..2057+

>mRNA_H-elongata_contig75156.15195.1 ID=mRNA_H-elongata_contig75156.15195.1|Name=mRNA_H-elongata_contig75156.15195.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1500bp|location=Sequence derived from alignment at H-elongata_contig75156:3..2057+ (Himanthalia elongata Himel1 dioecious)
GTGACGTCGGGTGTAGCGTTCGTGGCCGGACGGGATGTTCTCGGCGACAT
GGCCAACATTCGGCGTAACCTGGGTGTGTGCCCGCAGCATGACATCCTTT
ACCCCGATCTTACGGTCAGGGAGCACCTGCGTATGTACGCCGTACTCAAG
GGGGTGCCTGGATCGCGGCTTCAAGAGGCCATTTCGGTGACGTCGGGTGT
AGCGTTCGTGGCCGGACGGGATGTTCTCGGCGACATGGCCAACATTCGGC
GTAACCTGGGTGTGTGCCCGCAGCATGACATCCTTTACCCCGATCTTACG
GTCAGGGAGCACCTGCGTATGTACGCCGTACTCAAGGGGGTGCCTGGATC
GCGGCTTCAAGAGGCCATTTCGACCACCCTATCGGACGTGGGCCTCACGG
AGAAAATGAACGAGCGTACGAAGACTCTCTCCGGGGGACAAAAGAGAAAA
CTGTCGGTGGGCATAGCCCTCATCGGCGGTTCGAAGATTGTCTTCCTAGA
CGAGCCTACATCAGGGATGGACCCCCACAGACCACCCTATCGGACGTGGG
CCTCACGGAGAAAATGAACGAGCGTACGAAGACTCTCTCCGGGGGACAAA
AGAGAAAACTGTCGGTGGGCATAGCCCTCATCGGCGGTTCGAAGATTGTC
TTCCTAGACGAGCCTACATCAGGGATGGACCCCCACAGCCGTCGGTTCAC
GTGGGATCTTATCCGCAAGAATCGCGACGGGCGCGTGATCGTACTAACGA
CCCATTTTATGGACGAGGCTGACCTGCTCGGAGACCGTGTGGCGATCATG
GCCGATGGAGCGCTCCGATGTTGTGGAAGCTCGCTCTTCCTGAAGAACCA
CTACGGGGTTGGCCGTCGGTTCACGTGGGATCTTATCCGCAAGAATCGCG
ACGGGCGCGTGATCGTACTAACGACCCATTTTATGGACGAGGCTGACCTG
CTCGGAGACCGTGTGGCGATCATGGCCGATGGAGCGCTCCGATGTTGTGG
AAGCTCGCTCTTCCTGAAGAACCACTACGGGGTTGGTTACACTCCCCTCC
TTTTCGCCTCACGACAGAAAGAGAACGTGAAGCCCATTAAGCACCTGGTG
CGGTCGCACGTCATGGAGGCCACCATACTCAGCAACGTAGGCGCGGAGGT
GTCCTTCCAGCTTCCCAACGACGCATCAGGCGCTTTCGAAGCAATGCTCA
CCGAAATTGACGTTCGTAAGGCCGAGCTCGGCATCACTAGGTGCGAGGAG
GCCGCAGATCCATATTGATTACACTCCCCTCCTTTTCGCCTCACGACAGA
AAGAGAACGTGAAGCCCATTAAGCACCTGGTGCGGTCGCACGTCATGGAG
GCCACCATACTCAGCAACGTAGGCGCGGAGGTGTCCTTCCAGCTTCCCAA
CGACGCATCAGGCGCTTTCGAAGCAATGCTCACCGAAATTGACGTTCGTA
AGGCCGAGCTCGGCATCACTAGGTGCGAGGAGGCCGCAGATCCATATTGA