prot_H-elongata_contig75013.15184.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig75013.15184.1
Unique Nameprot_H-elongata_contig75013.15184.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length84
Homology
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BLAST of mRNA_H-elongata_contig75013.15184.1 vs. uniprot
Match: D8LPV7_ECTSI (PX domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPV7_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 6.670e-26
Identity = 49/63 (77.78%), Postives = 55/63 (87.30%), Query Frame = 0 
Query:   21 YAVVWRRFTAFRSLHFDIVNMLRGSHLLESLPPLPAKCINPLVNQMGEAFVERRKMVLQTYLR 83
            +AVVWRRF+AFRSLH D+  ML GSHLL+SLPPLPAKCINPLVNQMG AF+E R+ VLQ YLR
Sbjct:  182 HAVVWRRFSAFRSLHSDVTAMLWGSHLLDSLPPLPAKCINPLVNQMGAAFLESRREVLQAYLR 244
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig75013.15184.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LPV7_ECTSI6.670e-2677.78PX domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001683Phox homologous domainPFAMPF00787PXcoord: 19..83
e-value: 2.6E-6
score: 27.4
IPR001683Phox homologous domainPROSITEPS50195PXcoord: 1..83
score: 12.421
IPR036871PX domain superfamilyGENE3D3.30.1520.10coord: 12..83
e-value: 6.1E-9
score: 37.6
IPR036871PX domain superfamilySUPERFAMILY64268PX domaincoord: 17..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig75013contigH-elongata_contig75013:437..1190 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig75013.15184.1mRNA_H-elongata_contig75013.15184.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig75013 437..1732 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig75013.15184.1 ID=prot_H-elongata_contig75013.15184.1|Name=mRNA_H-elongata_contig75013.15184.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=84bp
MGGGFGGGVGVGAGAGDDRSYAVVWRRFTAFRSLHFDIVNMLRGSHLLES
LPPLPAKCINPLVNQMGEAFVERRKMVLQTYLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001683Phox
IPR036871PX_dom_sf