mRNA_H-elongata_contig750.15182.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig750.15182.1 vs. uniprot
Match: D7FYS6_ECTSI (Elongation of fatty acids protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYS6_ECTSI) HSP 1 Score: 376 bits (966), Expect = 2.420e-118 Identity = 180/213 (84.51%), Postives = 199/213 (93.43%), Query Frame = 2
Query: 2543 MVVVGSAVMSMLKPIDSYPVRFVYNVVQVMLCSYMSIEAFMIAYRNEYPLL-CAPFDTKSPPAADLLWLFYISKILDFMDTLFIVLKKSWRQLSFLHVYHHCTIYLFYWLNVNAGYDGDVYLTVLLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLLQMIQFVCMTSQALYLLATGCTNYPRRIVVVYAGYILSLLFLFAKFYVESYTKKPRKK 3178
MV VG VM+ + PIDSYPVRFVYNVVQ++LCSYM +EAFMIAYRN YP+L CAPFD ++PPAA+LLWLFY+SK+LDFMDT+FIVLKKSWRQLSFLHVYHHCTI+LFYWLNVNAGYDGDVYLT++LNGFIHTVMYTYYFVSMHTKDIWWKKYLTL+QMIQFVCMT+QALYLL TGCT+YP RIVVVYAGYILSLLFLFA+FYV SYTKKP K
Sbjct: 1 MVTVGPKVMADMSPIDSYPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLPCAPFDAENPPAANLLWLFYVSKVLDFMDTIFIVLKKSWRQLSFLHVYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTTQALYLLTTGCTSYPPRIVVVYAGYILSLLFLFAQFYVNSYTKKPTAK 213
BLAST of mRNA_H-elongata_contig750.15182.1 vs. uniprot
Match: A0A835Z8H5_9STRA (Elongation of fatty acids protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8H5_9STRA) HSP 1 Score: 338 bits (868), Expect = 1.860e-103 Identity = 158/256 (61.72%), Postives = 200/256 (78.12%), Query Frame = 2
Query: 2408 LRDRIDVIGDIVLEWTRNGQESGPTKEWMLTDFSTAVMIVAAYLAMVVVGSAVMSMLKPIDS--YPVRFVYNVVQVMLCSYMSIEAFMIAYRNEYPLL-CAPFDTKSPPAADLLWLFYISKILDFMDTLFIVLKKSWRQLSFLHVYHHCTIYLFYWLNVNAGYDGDVYLTVLLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLLQMIQFVCMTSQALYLLATGCTNYPRRIVVVYAGYILSLLFLFAKFYVESYTKK 3166
L I+ +G ++EW N +++GPT +W + DF +AVM+VAAYL + VGS VM ++P+D+ YP RF+YN+VQ+MLCSYM +EA +IA+RN Y +L C PF+ ++PP ++LWLFYISKILDF DT+FIVL+K W+QLSFLHVYHH TI+LFYWLN+N GYDGD+YLT++LNGFIHTVMYTYYFVSMHT IWWK LT +QM+QFV M SQALYLL TGCT YP R+ Y YI SLL LF F+++SY K
Sbjct: 6 LESSINSVGTRIIEWATNDRKAGPTADWPMADFYSAVMVVAAYLGFIFVGSFVMKFVQPLDAPTYPFRFIYNIVQIMLCSYMCLEAGIIAHRNNYGILPCVPFNVQNPPVGNVLWLFYISKILDFADTVFIVLRKKWKQLSFLHVYHHTTIFLFYWLNINVGYDGDIYLTIVLNGFIHTVMYTYYFVSMHTDKIWWKSSLTAMQMVQFVTMISQALYLLTTGCTTYPPRVTQAYCLYIFSLLILFGNFFIKSYMPK 261
BLAST of mRNA_H-elongata_contig750.15182.1 vs. uniprot
Match: A0A7R9WGN6_9STRA (Elongation of fatty acids protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WGN6_9STRA) HSP 1 Score: 321 bits (823), Expect = 4.300e-97 Identity = 165/268 (61.57%), Postives = 202/268 (75.37%), Query Frame = 2
Query: 2414 DRIDVIGDIVLEWTR-NGQESGPTKEWMLTDFSTAVMIVAAYLAMVVVGSAVM-SMLKPIDSYPVRFVYNVVQVMLCSYMSIEAFMIAYRNEYPLL-CAPFDTKSPPAADLLWLFYISKILDFMDTLFIVLKKSWRQLSFLHVYHHCTIYLFYWLNVNAGYDGDVYLTVLLNGFIHTVMYTYYFVSMHTKD--------IWWKKYLTLLQMIQFVCMTSQALYLLATGCTNYPRRIVVVYAGYILSLLFLFAKFYVESYTKKPRKKVS 3184
+ +D IG+ +L W G+ G T+ W LTDFS+A + AY+A VV+GSAVM S + +D YP++F+YNV Q+MLC+YM+IEAF++AYRN Y L C DT++PP A+LLWLFYISK+ DF DT+FIV+ K WRQLSFLHVYHH TI+LFYWLN + YDGD+YLT+LLNGFIHTVMYTYYF+ MHTKD IWWK YLTL+QMIQFV M SQA YLL T C R+V VY YILSL FLFA+FYV+SYTK P+KK +
Sbjct: 6 ETMDSIGESILSWADPEGKFRGHTEGWFLTDFSSAGTVALAYVAFVVIGSAVMKSGVAAMDPYPIKFIYNVSQIMLCAYMTIEAFLLAYRNGYTCLPCNNVDTENPPLANLLWLFYISKVWDFWDTVFIVIGKKWRQLSFLHVYHHTTIFLFYWLNSHVNYDGDIYLTILLNGFIHTVMYTYYFICMHTKDPKTGKSLPIWWKSYLTLMQMIQFVTMMSQATYLLGTQCEKTSLRVVFVYLVYILSLFFLFAQFYVQSYTK-PKKKAA 272
BLAST of mRNA_H-elongata_contig750.15182.1 vs. uniprot
Match: A0A7S4JGP6_9STRA (Elongation of fatty acids protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JGP6_9STRA) HSP 1 Score: 321 bits (823), Expect = 4.450e-97 Identity = 164/273 (60.07%), Postives = 201/273 (73.63%), Query Frame = 2
Query: 2399 IEDLRDRIDVIGDIVLEWTR-NGQESGPTKEWMLTDFSTAVMIVAAYLAMVVVGSAVM-SMLKPIDSYPVRFVYNVVQVMLCSYMSIEAFMIAYRNEYPLL-CAPFDTKSPPAADLLWLFYISKILDFMDTLFIVLKKSWRQLSFLHVYHHCTIYLFYWLNVNAGYDGDVYLTVLLNGFIHTVMYTYYFVSMHTKD--------IWWKKYLTLLQMIQFVCMTSQALYLLATGCTNYPRRIVVVYAGYILSLLFLFAKFYVESYTKKPRKKVS 3184
+E + +D IG+ +L W + Q G T+ W LTDF TA I AY+A VV+GSAVM S + +D YP++F YNV Q+MLC+YM+IE F++AYRN Y L C DTK+PP A+LLWLFY+SK+ DF DT+FIVL K WRQLSFLHVYHH TI+LFYWLN + +DGD+YLT++LNGFIHTVMYTYYF+ MHTKD IWWK LTL+Q+IQF+ M SQA YLL TGC R+V VY YILSL FLFA+FYV SYTKKP+KK +
Sbjct: 1 MEAYLNTMDSIGESILNWADPDNQFRGYTEGWFLTDFRTAGSIALAYVAFVVIGSAVMKSGVAAMDPYPIKFFYNVSQIMLCAYMTIEGFLLAYRNGYTCLPCIDIDTKNPPLANLLWLFYVSKVWDFWDTIFIVLGKKWRQLSFLHVYHHTTIFLFYWLNAHVNFDGDIYLTIVLNGFIHTVMYTYYFICMHTKDPKTGKSLPIWWKSSLTLMQLIQFITMMSQATYLLVTGCQKTGLRVVSVYFVYILSLFFLFAQFYVASYTKKPKKKAA 273
BLAST of mRNA_H-elongata_contig750.15182.1 vs. uniprot
Match: A0A6U1Q8V8_9STRA (Elongation of fatty acids protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1Q8V8_9STRA) HSP 1 Score: 313 bits (803), Expect = 4.060e-94 Identity = 155/248 (62.50%), Postives = 191/248 (77.02%), Query Frame = 2
Query: 2441 VLEWTRNGQESGPTKEWMLTDFSTAVMIVAAYLAMVVVGSAVMSM--LKPIDSYPVRFVYNVVQVMLCSYMSIEAFMIAYRNEYPLL-CAPFDTKSPPAADLLWLFYISKILDFMDTLFIVLKKSWRQLSFLHVYHHCTIYLFYWLNVNAGYDGDVYLTVLLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLLQMIQFVCMTSQALYLLATGCTNYPRRIVVVYAGYILSLLFLFAKFYVESYTKKPRK 3175
+L W G+ TK W LTD +A+ I AYL V+VGS + + + I YPV+F+YN+VQVMLCSYM+IEA M+A+R Y L C PF+ K+PP A++L++FY+SKILDFMDT FI++ K W+QLSFLHVYHH +I+LFYWLN+N GYDGDVYLT++LNGFIHTVMYTYYFVS+HTKDIWWK LT+ QMIQFV M +QA YLL TGC +YP RIV+ Y YILSLL LFA F+V+SY KK K
Sbjct: 26 ILAWVSEGRVHEYTKGWPLTDLESALTIAGAYLLFVLVGSMLFKVEAVPAIKLYPVQFLYNIVQVMLCSYMAIEAGMVAFRQGYTCLPCEPFNAKNPPVAEVLYIFYLSKILDFMDTFFIIIGKKWKQLSFLHVYHHTSIFLFYWLNINVGYDGDVYLTIVLNGFIHTVMYTYYFVSLHTKDIWWKSSLTMCQMIQFVTMNAQAGYLLLTGCKSYPPRIVLSYLVYILSLLVLFANFFVQSYLKKGGK 273
BLAST of mRNA_H-elongata_contig750.15182.1 vs. uniprot
Match: L1IAX0_GUITC (Elongation of fatty acids protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IAX0_GUITC) HSP 1 Score: 312 bits (799), Expect = 1.170e-93 Identity = 152/264 (57.58%), Postives = 197/264 (74.62%), Query Frame = 2
Query: 2423 DVIGDIVLEWTRNGQ---ESG------PTKEWMLTDFSTAVMIVAAYLAMVVVGSAVMSMLKPID--SYPVRFVYNVVQVMLCSYMSIEAFMIAYRNEYPLL-CAPFDTKSPPAADLLWLFYISKILDFMDTLFIVLKKSWRQLSFLHVYHHCTIYLFYWLNVNAGYDGDVYLTVLLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLLQMIQFVCMTSQALYLLATGCTNYPRRIVVVYAGYILSLLFLFAKFYVESYTKKPRKK 3178
D +G +L + N + +SG PT+ W LTDF++A I A Y A+V+VG VM + +D +YP+RFVYN++QVMLCSYM++EA ++AYR+ Y L+ C PF T++PP A +LWLFYISK+LDFMDT FIVL K W QLSFLHVYHH TI++ YW+NVN GYDGD+YLT++LNGFIHTVMYTYYFVSMHTKDIWWKKYLT++QMIQF+ M QA++LL + C +PR++ +Y YI+SL LF F++ SY KK
Sbjct: 9 DAVGRQLLNFAANTELFDDSGKAIKPLPTQGWFLTDFASAFAISAIYFALVIVGRIVMIPFRSLDKLTYPIRFVYNILQVMLCSYMTLEAGILAYRHNYNLVPCNPFKTENPPIAPVLWLFYISKVLDFMDTFFIVLGKKWEQLSFLHVYHHLTIFMIYWMNVNVGYDGDIYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTMMQMIQFITMNGQAIWLLQSNCQTFPRKVTQLYLVYIMSLFALFLNFFIRSYVSPKSKK 272
BLAST of mRNA_H-elongata_contig750.15182.1 vs. uniprot
Match: A0A6T8G4U0_HEMAN (Elongation of fatty acids protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6T8G4U0_HEMAN) HSP 1 Score: 310 bits (795), Expect = 3.460e-93 Identity = 152/267 (56.93%), Postives = 192/267 (71.91%), Query Frame = 2
Query: 2414 DRIDVIGDIVLEWTRNGQESG-------PTKEWMLTDFSTAVMIVAAYLAMVVVGSAVMSMLKPID--SYPVRFVYNVVQVMLCSYMSIEAFMIAYRNEYPLL-CAPFDTKSPPAADLLWLFYISKILDFMDTLFIVLKKSWRQLSFLHVYHHCTIYLFYWLNVNAGYDGDVYLTVLLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLLQMIQFVCMTSQALYLLATGCTNYPRRIVVVYAGYILSLLFLFAKFYVESYT--KKPRKK 3178
D +D GD +L W N PTK W FS+A +I A YL V+ G VM++ P+D +YP+RF YN+VQ+MLCSYM+IEA +AYRN Y + C PFDTKSPP LLWLFY+SKILDF+DT I+L K W QLSFLHVYHH TI++ YW+NVN GYDGD+YLT++LNG IHT+MYTYYFVSMH++DIWWKKYLT+ QMIQF+CM SQA+ L+ C +P R+ + Y YI++L FLF KF++ SYT KK ++K
Sbjct: 2 DVLDSYGDSLLAWFVNVDVDTFTRSFPRPTKSWPFASFSSAFLITAGYLLFVLAGRIVMTVFHPMDRLTYPIRFCYNIVQMMLCSYMTIEAAALAYRNGYNMYPCNPFDTKSPPLGPLLWLFYVSKILDFVDTAVIILGKKWGQLSFLHVYHHATIFIMYWVNVNVGYDGDIYLTIVLNGVIHTIMYTYYFVSMHSRDIWWKKYLTMCQMIQFICMNSQAILLIKDHCKTFPARVTMTYLFYIITLFFLFLKFFITSYTGGKKDKQK 268
BLAST of mRNA_H-elongata_contig750.15182.1 vs. uniprot
Match: A0A7R9ZKR5_9STRA (Elongation of fatty acids protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZKR5_9STRA) HSP 1 Score: 303 bits (776), Expect = 1.870e-90 Identity = 151/275 (54.91%), Postives = 191/275 (69.45%), Query Frame = 2
Query: 2399 IEDLRDRIDVIGDIVLEW-TRNGQESGPTKEWMLTDFSTAVMIVAAYLAMVVVGSAVMSMLKPIDSYPVRFVYNVVQVMLCSYMSIEAFMIAYRNEYPLL-CAPFDTKSPPAADLLWLFYISKILDFMDTLFIVLKKSWRQLSFLHVYHHCTIYLFYWLNVNAGYDGDVYLTVLLNGFIHTVMYTYYFVSMHTKD--------IWWKKYLTLLQMIQFVCMTSQALYLLATGCTNYPRRIVVVYAGYILSLLFLFAKFYVESYTKKPRKKVSTAT 3193
+E +D IG+ ++ W + SG T+ W LTDFS+A I AY+ V +GS VM+ L ID YP++F+YNV Q+MLC+YM++E +AYRN Y +L C P++ P +LLWLFYISK+ DF DT+FIVL K WRQLSFLHVYHH TI+LFYWLN N YDGD++LT++LNGFIHTVMYTYYF+ MHTKD IWWK YLT++QM+QFV M SQ YL+ + C R+ Y YILSL FLFA+FYVESY K + K + AT
Sbjct: 1 MEQYTTTLDSIGESIVRWGDPESKFSGHTEGWFLTDFSSAFTIALAYVLFVAIGSQVMNFLPAIDPYPIKFLYNVSQIMLCAYMTLEGCFLAYRNNYTILPCEPYNQHDPAIGNLLWLFYISKVWDFWDTIFIVLGKKWRQLSFLHVYHHTTIFLFYWLNSNVFYDGDIFLTIVLNGFIHTVMYTYYFICMHTKDKSTGKSLPIWWKSYLTMMQMVQFVTMMSQGSYLVVSQCDQSSLRVSSTYVVYILSLFFLFAQFYVESYMKPKKNKKTKAT 275
BLAST of mRNA_H-elongata_contig750.15182.1 vs. uniprot
Match: F0Y9P2_AURAN (Elongation of fatty acids protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9P2_AURAN) HSP 1 Score: 301 bits (770), Expect = 7.750e-90 Identity = 142/255 (55.69%), Postives = 185/255 (72.55%), Query Frame = 2
Query: 2423 DVIGDIVLEWTRNGQE--SGPTKEWMLTDFSTAVMIVAAYLAMVVVGSAVMSMLKP--IDSYPVRFVYNVVQVMLCSYMSIEAFMIAYRNEYPLLCAPFDTKSPPAADLLWLFYISKILDFMDTLFIVLKKSWRQLSFLHVYHHCTIYLFYWLNVNAGYDGDVYLTVLLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLLQMIQFVCMTSQALYLLATGCTNYPRRIVVVYAGYILSLLFLFAKFYVESYTKKPRK 3175
+ IGD ++ W G + P K W L F+TA+ I AYLA V+VGS +M I Y V F+YN+ QVMLCSYM IEA ++A R+ + L+C +D K PP A++LWLFY SK+LDF+DT FIV+ K W+QLSFLHVYHH TI+LFYWLN++ YDGD+YLT++LNG IHT+MYTYYFVSMHT+DIWWKKYLTL Q++QF CM +QA+Y+ TGC+ P R+ +Y YI+SL LF +F++ SY K +K
Sbjct: 5 EAIGDQIIAWALVGSDVTDEPVKGWALGSFTTAISIAGAYLAFVLVGSLIMRAYPGDGIKLYGVAFLYNIAQVMLCSYMCIEAVIVAKRSNFNLVCNSYDAKHPPMANVLWLFYASKVLDFVDTFFIVIGKKWKQLSFLHVYHHTTIFLFYWLNLHVNYDGDIYLTIVLNGAIHTIMYTYYFVSMHTRDIWWKKYLTLAQLVQFTCMNAQAIYMFVTGCSATPPRVTAIYFVYIISLFILFLQFFMSSYVPKKKK 259
BLAST of mRNA_H-elongata_contig750.15182.1 vs. uniprot
Match: W7TSM8_9STRA (Elongation of fatty acids protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSM8_9STRA) HSP 1 Score: 303 bits (775), Expect = 9.790e-90 Identity = 154/280 (55.00%), Postives = 191/280 (68.21%), Query Frame = 2
Query: 2363 PFPHVPYQMGPVIEDLRDRIDVIGDIVLEWT--RNGQESGPTKEWMLTDFSTAVMIVAAYLAMVVVGSAVMSMLKPIDSYPVRFVYNVVQVMLCSYMSIEAFMIAYRNEYPLL-CAPFDTKSPPAADLLWLFYISKILDFMDTLFIVLKKSWRQLSFLHVYHHCTIYLFYWLNVNAGYDGDVYLTVLLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLLQMIQFVCMTSQALYLLATGCTNYPRRIVVVYAGYILSLLFLFAKFYVESYT------KKPRK 3175
P P+ Y M + D + + D + +W PT+ W L A+ I AAYL V VGS VM +P+ Y ++F YN+ QV LCSYM IEA + AYRN Y LL C PF+T +PP LLWLFYISKI DF DT+FI+L K W QLSFLHVYHH TI+L YWLN+NAGYDGD++LTV+LNG IHTVMY YYF+SMHTKDIWWKKYLTL Q+IQF+ M +QA+Y+L GC ++P +I +Y GYILSLL LF FY ++Y+ KKP+K
Sbjct: 8 PLPY--YIMAGYLADYQKTCAELTDAIFKWADPAGTMLKSPTRTWPLAGLDVALAIAAAYLVFVFVGSIVMKDAQPVKLYGLQFFYNISQVALCSYMCIEAVIQAYRNNYTLLPCEPFNTTNPPLGPLLWLFYISKIFDFADTVFIILGKKWSQLSFLHVYHHVTIFLVYWLNLNAGYDGDIFLTVILNGAIHTVMYAYYFLSMHTKDIWWKKYLTLFQIIQFLTMNAQAIYILGVGCKSFPTQITKLYLGYILSLLVLFLNFYFKTYSSPKPNGKKPKK 285 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig750.15182.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig750.15182.1 >prot_H-elongata_contig750.15182.1 ID=prot_H-elongata_contig750.15182.1|Name=mRNA_H-elongata_contig750.15182.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=283bp MGPVIEDLRDRIDVIGDIVLEWTRNGQESGPTKEWMLTDFSTAVMIVAAYback to top mRNA from alignment at H-elongata_contig750:9933..17689- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig750.15182.1 ID=mRNA_H-elongata_contig750.15182.1|Name=mRNA_H-elongata_contig750.15182.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7757bp|location=Sequence derived from alignment at H-elongata_contig750:9933..17689- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig750:9933..17689- >mRNA_H-elongata_contig750.15182.1 ID=mRNA_H-elongata_contig750.15182.1|Name=mRNA_H-elongata_contig750.15182.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1698bp|location=Sequence derived from alignment at H-elongata_contig750:9933..17689- (Himanthalia elongata Himel1 dioecious)back to top |