mRNA_H-elongata_contig75.15179.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig75.15179.1
Unique NamemRNA_H-elongata_contig75.15179.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig75.15179.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 207 bits (527), Expect = 4.810e-57
Identity = 149/389 (38.30%), Postives = 201/389 (51.67%), Query Frame = 3
Query:  438 MALQRALVTRYTKSSQMADRLEEMCGILKVPSLQVVQDVETSWNSTFCLVERSRQLRDVIQLHERPENIASLLTDDDWEVLKLIEPILRPFMDAQTELGGAKYVTGTLVAPYVYSLRRGLEKARSSLNGI---------------VSPCVEALWEDFINRWDTDKDMLT---------------QLLVTALDPRSKSLCGVEEDDQDAVWQEVHKAAMKIETGARTSTQESSGVVDMTTSEETGTTSSSI---QQPATRARTSCFIAAARRHSSN------------------------------APA-------SSASADAGSFYNPLVWWKIKKKDYPLLANLARRVLTIPASQTQSERLFSSAGLIVSKRRNRLSLEHLQLLVFVR 1394
            + L R LV RY KSSQMA RL ++CGIL++  L V+QDVET W ST+ +V R   L   I+LHE  + +  LL+D DWEVL+LIEPILRPFM AQ +L GA+YVTG++    +  LR GLE A + L  +               V P  EAL  DF NRW    ++L                Q+  TALDPR+K L G+++ +   VW+ V  AA+ I  G      ++    +   S+   T  + +   Q  + R R S F AAA                                    AP         + + D   F NPL  W+ K+ +YPLLA LARRVL IP+SQ QSER+FS+AGL V+  R+RL  E+++LLV++R
Sbjct:  157 LGLARTLVGRYKKSSQMAARLVQLCGILQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAELREGLEAAITDLKAVAQQGLKETTQKAMEAVRPDAEALMADFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAAVDIALGKHAG-DKAPASAEKPASDPVQTQPAPLGGGQGASKRPRMSAFEAAAAXXXXXXXXXXXXXSADEKREQLVAIVDMEVSAFKAAPGIRVWDMQKTNTGDKKVFNNPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYLR 544          
BLAST of mRNA_H-elongata_contig75.15179.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE)

HSP 1 Score: 180 bits (456), Expect = 1.680e-45
Identity = 141/425 (33.18%), Postives = 195/425 (45.88%), Query Frame = 3
Query:  423 GVKRTMALQRALVTRYTKSSQMADRLEEMCGILKVPSLQVVQDVETSWNSTFCLVERSRQLRDVIQLHERPENIASLLTDDDWEVLKLIEPILRPFMDAQTELGGAKYVTGTLVAPYVYSLRRGLEKARSSLNGIVSP--------------CVEALWEDFINRWDTDKDMLT---------------QLLVTALDPRSKSLCGVEEDDQDAVWQEVHKAAMKIETGARTSTQESSGVVDMTT-----------------------------------SEETGTTSSSIQ-QPATRARTSCFIAAA----------RRHSSNAPASSASADAGSFYN--------------------------PLVWWKIKKKDYPLLANLARRVLTIPASQTQSERLFSSAGLIVSKRRNRLSLEHLQLLVFVR 1394
            GV + +AL R +VTRYT SSQ +DRLE++C I++V    VVQDVET W ST+  + R   LR  I  HE  ++   LL + DWEVL+L+E +L+PFM AQ  L  +K VT  LV+PY+  L+ GL++A   L     P              C +AL  D   RW    D+L                Q+L TAL PRSKSL G+EE +   VW      A+K+   A+ +                                               ++  G +SS I  +PA                      ++ S+NA +S       S  +                          PL WW++K ++YP LA+LARRVL IPA Q QSER+FSSAGL+V+K R R+  E++ L+VF+R
Sbjct:  117 GVSKALALARGVVTRYTISSQASDRLEQVCDIVQVERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADLQDGLDEAVERLQAHSCPAESIVAEAKKDVILCAQALQTDLSRRWGDRTDVLVYTEGPRRQPRGFKKEQVLATALGPRSKSLYGIEETEHSDVWDAGANEAVKVAIEAKATEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQSAGASSSPIPVEPAXXXXXXXXXXXXXXXXXXAHGDKQQSANASSSPLRRQMESIISREVDAFKITPGLAVSWEEKGQEVRGKPLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARMDPENVGLMVFLR 541          
BLAST of mRNA_H-elongata_contig75.15179.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE)

HSP 1 Score: 170 bits (431), Expect = 1.730e-43
Identity = 114/277 (41.16%), Postives = 151/277 (54.51%), Query Frame = 3
Query:  438 MALQRALVTRYTKSSQMADRLEEMCGILKVPSLQVVQDVETSWNSTFCLVERSRQLRDVIQLHERPENIASLLTDDDWEVLKLIEPILRPFMDAQTELGGAKYVTGTLVAPYVYSLRRGLEKARSSLN-----GI----------VSPCVEALWEDFINRWDTDKDMLT---------------QLLVTALDPRSKSLCGVEEDDQDAVWQEVHKAAMKIETGARTSTQES-SGVVDMTTSEETGTTSSSIQQPATRARTSCFIAAARRHSSNAPAS 1175
            +A  RA+V RY +SSQM+ RL    GILK+  L V+QDVET W S++ ++ER   L   I+LHE  +NIA +L++ DWEVL+LIEPILRPFM AQ +L GAKYVTG++  P +  LR GLE A + L      GI          V P  EALWEDF+NRW     +L                Q+  TA+DPR+K L G+ + +  +VW+ V   A+ I     +S   + SG         T   +   Q    RAR S F AAA  H+  A +S
Sbjct:  193 LAKARAVVGRYKRSSQMSGRLAVFIGILKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGELRNGLEAAIADLRATDRFGISASTREAMEAVLPDAEALWEDFLNRWGDGSSILEYREGKRRQPQGFKLQQVCATAVDPRAKHLYGIRQAEHASVWRAVATKAVDIAAEKFSSDNTATSGSAPAAQPVGTPPVAPGGQGAPKRARLSAFEAAAAAHAGAAASS 469          
BLAST of mRNA_H-elongata_contig75.15179.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE)

HSP 1 Score: 164 bits (414), Expect = 1.690e-41
Identity = 123/338 (36.39%), Postives = 177/338 (52.37%), Query Frame = 3
Query:  423 GVKRTMALQRALVTRYTKSSQMADRLEEMCGILKVPSLQVVQDVETSWNSTFCLVERSRQLRDVIQLHERPENIASLLTDDDWEVLKLIEPILRPFMDAQTELGGAKYVTGTLVAPYVYSLRRGLEKARSSLNGIVSPCVEALWEDFINRWDTDKDMLT-------------QLLVTALDPRSKSLCGVEEDDQDAVWQEVHKAAMKIETGARTSTQESSGVVDMTTSEETGTTSSSIQ-QPATRARTSCFIAAARRHSSNAPASSASADAGSFYNPLVWWKIKKKDYPLLANLARRVLTIPASQTQSERLFSSAGLIVSKRRNRLSLEHLQLLVFVR 1394
            GV + +AL R +VTRY  SSQ +DRLE+M  I++V   +VVQDVET W ST+  + R   LR  I  HER ++I  LL + DWEVL+++EP+ +PF+ +Q     +K VT +LV PY+  LR  L++A   L     P    + E   + +   K +               Q+L TALDPRSKSL G+EE +   VW+ V   A+K+   A+ +    S           G +SS I  +PA     +            A AS+   D              K+     ++   RVL IPASQ QSER+FSSAGL+V+K R R+  E+++L++F+R
Sbjct:  161 GVSKALALARRVVTRYNMSSQASDRLEQMRDIVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYIADLRDELDEAVERLQAHACPAESIVAEAKKDVFFAPKHVRPTSVIVEPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAKATEDTQSA----------GASSSLIPVEPA-----AXXXXXXXXXXDFAAASAVPGD--------------KQQSANASSSTSRVLCIPASQPQSERVFSSAGLVVTKTRARMDPENVELMLFLR 469          
BLAST of mRNA_H-elongata_contig75.15179.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 8.190e-34
Identity = 90/229 (39.30%), Postives = 120/229 (52.40%), Query Frame = 3
Query:  423 GVKRTMALQRALVTRYTKSSQMADRLEEMCGILKVPSLQVVQDVETSWNSTFCLVERSRQLRDVIQLHERPENIASLLTDDDWEVLKLIEPILRPFMDAQTELGGAKYVTGTLVAPYVYSLRRGLEKARSSLNGIVSP--------------CVEALWEDFINRWDTDKDMLT---------------QLLVTALDPRSKSLCGVEEDDQDAVWQEVHKAAMKIETGAR 1022
            GV + +AL R +VTRYT SSQ ++RLE+MC I++V   +VVQDVET W ST       R++          ++I  LL + DWEVL+L+EP+L PFM AQ  L  +K VT +LV  Y+  LR  L++A   L     P              C  AL  D   RW    D+L                Q+L TALDPRSKSL G+EE +   VW+ V   A+K+   A+
Sbjct:  105 GVSKALALPRGVVTRYTMSSQASNRLEQMCDIVQVERKKVVQDVETRWWST------PREI----------DSIPPLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLVTAYIADLRDELDEAIERLQAYSCPAESIVAEAKKDILRCAPALQTDLSRRWRDGTDVLVYTEGPRRQPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAK 317          
BLAST of mRNA_H-elongata_contig75.15179.1 vs. uniprot
Match: UPI0018D0BB03 (E3 SUMO-protein ligase ZBED1 n=1 Tax=Plutella xylostella TaxID=51655 RepID=UPI0018D0BB03)

HSP 1 Score: 119 bits (299), Expect = 1.260e-25
Identity = 98/338 (28.99%), Postives = 159/338 (47.04%), Query Frame = 3
Query:  423 GVKRTMALQRALVTRYTKSSQMADRLEEMCGILKVPSLQVVQDVETSWNSTFCLVERSRQLRDVI-----QLHERPENIASLLTDDDWEVLKLIEPILRPFMDAQTELGGAKYVTGTLVAPYVYSLRRGLEKARSSLNGIVSPCVEALWEDFINR-WDTDKDMLTQLLVTALDPRSKSLCGVEEDDQDAVWQEVHKAAMKIETGARTSTQESSGVVDMTTSEETGTTSSSIQQPATRARTSCFIAAARRHSSNAPASSASADAGSFY---------NPLVWWKIKKKDYPLLANLARRVLTIPASQTQSERLFSSAGLIVSKRRNRLSLEHLQLLVFV 1391
            G+K  +   R +VT + +SS  + +L+E  G L +  L + QD+ T WNST+ ++ER   LR  I     +L   PEN+++    DDW V+K + PIL+PF+    EL G KYVT + + P +  LR  + +A  S    +   ++    D++ R   + +        T LDPR K     ++D+     Q V +      T       E    VD      T  T SS + P        F           P ++A      +          +P+ +W+  ++ +P L  +A++ L IPA+   SERLFS AG ++S+RRNRLS + +  ++F+
Sbjct:  170 GLKELLLKCRTIVTHFKQSSVASYKLKEKQGELNLTELVLKQDIVTRWNSTYIMLERLLTLRQPICLALMELDRAPENLSA----DDWTVIKDVLPILQPFLQLTEELSGDKYVTMSTIVPLIRGLRLAIREA--SPISFIGQSLQISCVDYVTRRLGSIESNKIVAKATFLDPRFKKAAFGQDDNARNAQQWVTEEL----TSLLARHNEEGATVD------TERTHSSFRVPNREMSLWSFFDERASEQRPTPIATAIVMLRQYMETPLFNRKKDPMEYWRDHERTFPELYKMAKKYLCIPATSVPSERLFSKAGYVLSERRNRLSSDKMNEIIFL 491          
BLAST of mRNA_H-elongata_contig75.15179.1 vs. uniprot
Match: UPI0020145D6B (E3 SUMO-protein ligase ZBED1 n=1 Tax=Megalobrama amblycephala TaxID=75352 RepID=UPI0020145D6B)

HSP 1 Score: 113 bits (282), Expect = 4.150e-23
Identity = 102/355 (28.73%), Postives = 186/355 (52.39%), Query Frame = 3
Query:  408 VHHCVGVKRTMALQRALVTRYTKSSQMADRLEEMCGILKVPSLQVVQDVETSWNSTFCLVERSRQLRDVI--QLHERP--ENIASLLT--DDDWEVLKLIEPILRPFMDAQTELGGAKYVTGTLVAPYVYSLRRGLEKARSSLNGIVSPCVEALWEDFINRW-DTDKDMLTQL-LVTALDPRSKSLCGVEEDDQDAVWQEVHKAAMKI---ETGARTSTQESSGVVDMTTSEETGTTSSSIQQPATRARTSC-----FIAAARRHSSNAPASSASADAGSFY----------NPLVWWKIKKKDYPLLANLARRVLTIPASQTQSERLFSSAGLIVSKRRNRLSLEHLQLLVFVR 1394
            VHH   + R +   R +VT + +S+  A  L+E   +L++P  ++VQDV T WNS+  ++ER  + +  +   L ++   +NI  ++T  DDD ++ + +  +L+P     T +   +  T +++ P  + +   ++ + S  + +V     A+  DF +R+ D+D+ ++  L + TALDPR KSL  ++E   D +++ + +  ++       A+TST+E S         E  ++ S+   PA RA         F +  +  SS+ P S+   +    Y          NPL+WWK  +  +P LA LA+  L IPA+   SER+FS+AG IV+ +R  LS +++ ++VF++
Sbjct:  280 VHH---MSRLLGRVRKVVTFFHRSTTAAAVLKEKQVMLQLPLHKLVQDVATRWNSSHDMLERYLEQQAAVFSALTDKSVKKNIKDIITLSDDDVKLAEDVVQVLKPLKTVTTLMSTEQMPTISMIVPLKHRILASMKHSVSD-STVVKDIKTAIAHDFEDRYPDSDRALIQFLHMSTALDPRFKSLPFLDETTHDTIFKSLTERILEDCSQTVQAQTSTEEQS---------EIASSCSNCPPPAKRAPMMAELFGDFFSMEQAASSSKPLSAVVDEEVRHYRAVQSLSLESNPLMWWKDNQNQFPHLAKLAKMYLGIPATSVPSERVFSTAGDIVTAQRASLSPDNVDMMVFLK 621          
BLAST of mRNA_H-elongata_contig75.15179.1 vs. uniprot
Match: UPI001C392184 (zinc finger BED domain-containing protein 4-like n=1 Tax=Ixodes scapularis TaxID=6945 RepID=UPI001C392184)

HSP 1 Score: 112 bits (281), Expect = 5.640e-23
Identity = 95/327 (29.05%), Postives = 160/327 (48.93%), Query Frame = 3
Query:  441 ALQRALVTRYTKSSQMADRLEEMCGILKVPSLQVVQDVETSWNSTFCLVERSRQLRDVIQLHERPENIASLLTDDDWEVLKLIEPILRPFMDAQTELGGAKYVTGTLVAPYVYSLRRGLEKARSSLNGIVSPCVEALWEDFINRWDTDKDMLTQLLVTALDPRSKSLCGVEEDDQDAVWQEVHKAAMKIETGARTSTQESSGVVDMTTS---EETGTTSSSIQQPATRARTSCFIAAARRHSSNAPASSASADAGSF------YNPLVWWKIKKKD-YPLLANLARRVLTIPASQTQSERLFSSAGLIVSKRRNRLSLEHLQLLVFV 1391
            A  R +V  Y +S++   RL E+   + + +L+VVQDV T WNS   ++ER  +LR  I       +    L+  +W+++  +  +L+P   A  EL   +Y T + V P ++     L++ ++      +P   +L      R+   K      L   +DPR K++C + E ++   W      A+   T    +  +   V D  +S     + TTSS++      A  +   ++A + +++ PA+    D  S         PL WWK +    YP L  +A++ L+IPA+QT+SERLFS+AG +VS RR  L  EH++ LVF+
Sbjct:  313 AKARCIVGHYKRSARARGRLIEIQKDMHMNALEVVQDVPTRWNSEHSMMERLVKLRAPISAELSESDSVENLSTKEWKLMAAVVKVLQPLQQATAELSADRYPTLSQVIPLLHCTHVVLQEHKTG-GEEAAPFAYSLARSLATRFPDLKMSPVPALAMLIDPRYKNICYLTESEKK--W----ARALLTTTAEELAPAQQEHVPDSPSSAGPSHSATTSSTVW-----AVFASLSSSAHQETAHQPAAGQVTDYLSAPLLPRSARPLEWWKTRGSHLYPGLVKVAQKYLSIPATQTRSERLFSTAGNVVSSRRELLLTEHVEQLVFL 627          
BLAST of mRNA_H-elongata_contig75.15179.1 vs. uniprot
Match: UPI0006234F41 (zinc finger BED domain-containing protein 4-like n=1 Tax=Linepithema humile TaxID=83485 RepID=UPI0006234F41)

HSP 1 Score: 111 bits (277), Expect = 1.770e-22
Identity = 91/339 (26.84%), Postives = 171/339 (50.44%), Query Frame = 3
Query:  438 MALQRALVTRYTKSSQMADRLEEMCGILKVPSLQVVQDVETSWNSTFCLVERSRQLRDVIQLHERPENIASLLTDDDWEVLKLIEPILRPFMDAQTELGGAKYVTGTLVAPYVYSLRRGLEKARSSLNGIVSPCVEALWEDFINRWDTDKDMLTQLLVTALDPRSKSLCGVEEDDQDAVWQEVHKAAMKI-------ETGARTSTQESSGVVD--MTT---SEETGTTSSSIQQPATRARTSCFIAAARRHSSNAPASSASADAGSFYN---------PLVWWKIKKKDYPLLANLARRVLTIPASQTQSERLFSSAGLIVSKRRNRLSLEHLQLLVFV 1391
            +A+ R +VT +  S     +L+ +   L +P+L++VQDV+T WNSTF +++R  +L+  I +          L+   W +L+    +L+PF +   E+  ++ +   ++ P V SL++ L K  S     V    ++L ++  NR++     +     T LDPR K+    + D    +  E++    +I       E+    +++ ++ + D  +TT    E   T  S I   +  + ++C  A + R+SSN  +++ S +  ++ +         P +WW   +K  P+L+ LA + L IPA+   SERLFS AG++  K+RNRL  ++ + L+F+
Sbjct:  274 IAVSRKIVTHFNHSPAACYKLKAIQRELNMPTLKLVQDVQTRWNSTFYMLQRLFELKRAISIFTIETEAIVNLSSHQWSLLENCLKLLQPFEEITKEISSSESIISEVI-PIVASLKKYLLKEISFFG--VGTMKDSLIQNVNNRFNNILLNINYTHATFLDPRFKT-AFFDNDMSSKIKIEIYHKMQEISQEHEILESDDLNNSESNNDIDDESLTTFRRKETIWTCFSEIANASDASTSACGNAISNRNSSNTESNTKSCEIDTYLSMKLIERIESPFLWWHDNRKILPILSKLAEKYLCIPANSVYSERLFSKAGIVYEKKRNRLLPDNGEKLIFL 608          
BLAST of mRNA_H-elongata_contig75.15179.1 vs. uniprot
Match: A0A3B1KKC0_ASTMX (BED-type domain-containing protein n=1 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A3B1KKC0_ASTMX)

HSP 1 Score: 110 bits (276), Expect = 2.450e-22
Identity = 99/352 (28.12%), Postives = 160/352 (45.45%), Query Frame = 3
Query:  372 HDSRRLLKPPIRVHHCVGVKRTMALQRALVTRYTKSSQMADRLEEMCGILKVPSLQVVQDVETSWNSTFCLVERSRQLRDVIQLHERPENIASLLTDDDWEVLKLIEPILRPFMDAQTELGGAKYVTGTLVAPYVYSLRRGLEKARSSLNGIVSPCVEALWEDFINRWD-----TDKDMLTQLLVTALDPRSKSLCGVEEDD----QDAVWQEVHKAAMKIETGAR--TSTQESSGVVDMTTSE-ETGTTSSSIQQPATRARTSCFIAAARRHSSNAPASSASADAGSFYNPLVWWKIKKKDYPLLANLARRVLTIPASQTQSERLFSSAGLIVSKRRNRLSLEHLQLLVFV 1391
            H    +++  +R+HH   + + +A  R+LV  + KS     +L++    + V    +VQDV T WNST+ ++ R ++ R  +                 W +++ ++P+L  F  A   L G +YVT + +   V+ L++ +++       + S    A+ E    RW+     T +     LL  ALDPR + L  +  D+    Q+AV    + A  +   G    +ST+  +      TS  ++ TT+S I     R      I        N              NPL WW+     YP L  LA+ +L IPA+ T SERLFS+AG I SK+R  LS EH+ +L F+
Sbjct:  294 HTLNLVVQSSLRIHH--SIPKCVAAARSLVEHFKKSELSCTKLKDKQKQMNVKENMLVQDVCTRWNSTYTMLSRLQEQRWPVT----------------WNLIEELKPVLSTFQSATVFLSGQQYVTLSALPHLVHKLKQNIQRPELETAPVRSFQTHAV-EQVTERWEGLTEFTSESQNITLLAAALDPRFRKLRFLPADEVLKIQNAVRAMANAAKQQPTAGTHGASSTEAPAAYAKEATSFFDSDTTTSIILY---RKIILIQIMTVVTEEQNLNKQKKKHPLSKKENPLTWWEKNSARYPTLVELAKSLLCIPATSTPSERLFSAAGNIASKKRASLSPEHVDMLTFL 623          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig75.15179.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCS5_ECTSI4.810e-5738.30Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A6H5JHP9_9PHAE1.680e-4533.18Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A6H5KUY5_9PHAE1.730e-4341.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJV8_9PHAE1.690e-4136.39Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KVI1_9PHAE8.190e-3439.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI0018D0BB031.260e-2528.99E3 SUMO-protein ligase ZBED1 n=1 Tax=Plutella xylo... [more]
UPI0020145D6B4.150e-2328.73E3 SUMO-protein ligase ZBED1 n=1 Tax=Megalobrama a... [more]
UPI001C3921845.640e-2329.05zinc finger BED domain-containing protein 4-like n... [more]
UPI0006234F411.770e-2226.84zinc finger BED domain-containing protein 4-like n... [more]
A0A3B1KKC0_ASTMX2.450e-2228.13BED-type domain-containing protein n=1 Tax=Astyana... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig75contigH-elongata_contig75:3527..5125 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score226.1
Seed ortholog evalue2.3e-56
Seed eggNOG ortholog2880.D7G5Z0
EggNOG free text desc.protein dimerization activity
EggNOG OGsKOG1121@1,KOG1121@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons5
Model size1394
Cds size957
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig75.15179.1prot_H-elongata_contig75.15179.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig75 3527..4672 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931154.903602-CDS-H-elongata_contig75:3526..37161622931154.903602-CDS-H-elongata_contig75:3526..3716Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75 3527..3716 -
1691679720.851507-CDS-H-elongata_contig75:3526..37161691679720.851507-CDS-H-elongata_contig75:3526..3716Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75 3527..3716 -
1622931154.932953-CDS-H-elongata_contig75:3809..41141622931154.932953-CDS-H-elongata_contig75:3809..4114Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75 3810..4114 -
1691679720.8609254-CDS-H-elongata_contig75:3809..41141691679720.8609254-CDS-H-elongata_contig75:3809..4114Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75 3810..4114 -
1622931154.9521904-CDS-H-elongata_contig75:4159..42321622931154.9521904-CDS-H-elongata_contig75:4159..4232Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75 4160..4232 -
1691679720.868717-CDS-H-elongata_contig75:4159..42321691679720.868717-CDS-H-elongata_contig75:4159..4232Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75 4160..4232 -
1622931154.9717934-CDS-H-elongata_contig75:4283..46721622931154.9717934-CDS-H-elongata_contig75:4283..4672Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75 4284..4672 -
1691679720.876339-CDS-H-elongata_contig75:4283..46721691679720.876339-CDS-H-elongata_contig75:4283..4672Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75 4284..4672 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931154.9910276-UTR-H-elongata_contig75:4672..46861622931154.9910276-UTR-H-elongata_contig75:4672..4686Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig75 4673..4686 -
1691679720.8845508-UTR-H-elongata_contig75:4672..46861691679720.8845508-UTR-H-elongata_contig75:4672..4686Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig75 4673..4686 -
1622931155.0113933-UTR-H-elongata_contig75:4702..51251622931155.0113933-UTR-H-elongata_contig75:4702..5125Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig75 4703..5125 -
1691679720.8990746-UTR-H-elongata_contig75:4702..51251691679720.8990746-UTR-H-elongata_contig75:4702..5125Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig75 4703..5125 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig75.15179.1

>prot_H-elongata_contig75.15179.1 ID=prot_H-elongata_contig75.15179.1|Name=mRNA_H-elongata_contig75.15179.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=319bp
MALQRALVTRYTKSSQMADRLEEMCGILKVPSLQVVQDVETSWNSTFCLV
ERSRQLRDVIQLHERPENIASLLTDDDWEVLKLIEPILRPFMDAQTELGG
AKYVTGTLVAPYVYSLRRGLEKARSSLNGIVSPCVEALWEDFINRWDTDK
DMLTQLLVTALDPRSKSLCGVEEDDQDAVWQEVHKAAMKIETGARTSTQE
SSGVVDMTTSEETGTTSSSIQQPATRARTSCFIAAARRHSSNAPASSASA
DAGSFYNPLVWWKIKKKDYPLLANLARRVLTIPASQTQSERLFSSAGLIV
SKRRNRLSLEHLQLLVFVR
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mRNA from alignment at H-elongata_contig75:3527..5125-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig75.15179.1 ID=mRNA_H-elongata_contig75.15179.1|Name=mRNA_H-elongata_contig75.15179.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1599bp|location=Sequence derived from alignment at H-elongata_contig75:3527..5125- (Himanthalia elongata Himel1 dioecious)
GTGAAAGATCCTAAGTTACCCACCCGGCGCCAGCTGGTCGATGACTTTGA GGAAACACGTGATGATTTGTATCGAGGCGCCAGGGAGATCTTGGAACGCC AACATACCGCGATGGCTTCGGATGGGTGGACGTCATGTTTCAACGACACC TACCACTCCTTCACCTCCTCCTTAATTGATGACGAGTTCGACTTGCTCGG GCTTGCGATGGACTGCAAGAAGATGAGCGGGAAAACTGCAGGAACGGACC TTGCGGACAACATCAAAGATCTGATAGATTCCCATGATATGGCCGGGCGC GTCACTGCTGCTATAACCGGCTGCGAATCGTCAATGATTGTGTGAGGCTG GGAGCTCGAAGAAAGAGACATCACGACTCACGTCGGCTGCTGAAACCACC GATTCGAGTGCACCACTGCGTTGGTCTTCAACGAATCAGGGGTGAAGAGG ACCATGGCACTCCAACGGGCACTCGTTACCCGGTACACCAAATCAAGTCA AATGGCTGACCGCCTCGAAGAAATGTGCGGAATACTCAAGGTGCCTTCAC TGCAGGTGGTGCAGGATGTGGAGACCAGTTGGAACTCAACGTTTTGTTTG GTAGAGCGTAGTAGGCAACTGCGCGACGTAATCCAACTGCACGAGCGCCC CGAAAACATAGCATCACTGCTGACAGATGACGACTGGGAGGTGCTGAAGT TGATCGAGCCTATTCTTCGGCCTTTCATGGACGCACAGACGGAGTTGGGG GGCGCAAAGTACGTTACAGGAACCTTGGTGGCCCCCTACGTCTATAGCCT CCGCCGCGGGCTGGAGAAGGCGAGATCGTCGCTGAATGGCATGTTCACTG TTCCTGAACACGGTGACAGTGTTCAGTCAAGAGCAAGAGTAAGTGTCTCT CCTTGCGTTGAAGCTCTGTGGGAAGATTTCATCAACCGGTGGGATACTGA CAAGGACATGCTGACCGTTAGGGGGTGGAAGAGGCGTTAGCCACGAGGTT TTAAGCTTGAGCAGCTGTTGGTGACTGCTTTGGACCCTAGATCCAAGAGC TTGTGTGGAGTGGAAGAAGATGACCAAGACGCCGTGTGGCAAGAAGTTCA CAAAGCGGCAATGAAGATCGAAACTGGGGCACGAACATCAACCCAAGAGT CCAGTGGTGTCGTAGACATGACCACGTCTGAAGAAACTGGTACCACCTCA TCGTCTATTCAGCAACCAGCTACACGGGCACGCACGTCTTGTTTTATAGC TGCTGCACGTCGTCATTCTTCCAACGCACCGGCGTCCAGCGCATCTGCCG ACGCAGGATCATTTTAGTCTCAACAGGTGGCCTATCAGCTGGGAATGGAG GTCGATTCATTTATGTGCCTCGCCTCTCTGTACTCTATAGATGCCAACGA CCAGCATAGCAATCCGCTGGTGTGGTGGAAGATCAAGAAGAAGGACTACC CGTTGCTGGCCAACCTGGCTCGCCGTGTGCTCACCATTCCTGCCTCACAG ACCCAGTCAGAGCGCCTCTTTTCGTCAGCCGGATTGATTGTGTCCAAGAG GCGCAACCGATTATCGCTTGAACACCTGCAGCTTCTCGTCTTTGTTCGC
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Coding sequence (CDS) from alignment at H-elongata_contig75:3527..5125-

>mRNA_H-elongata_contig75.15179.1 ID=mRNA_H-elongata_contig75.15179.1|Name=mRNA_H-elongata_contig75.15179.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1914bp|location=Sequence derived from alignment at H-elongata_contig75:3527..5125- (Himanthalia elongata Himel1 dioecious)
ATGGCACTCCAACGGGCACTCGTTACCCGGTACACCAAATCAAGTCAAAT
GGCTGACCGCCTCGAAGAAATGTGCGGAATACTCAAGGTGCCTTCACTGC
AGGTGGTGCAGGATGTGGAGACCAGTTGGAACTCAACGTTTTGTTTGGTA
GAGCGTAGTAGGCAACTGCGCGACGTAATCCAACTGCACGAGCGCCCCGA
AAACATAGCATCACTGCTGACAGATGACGACTGGGAGGTGCTGAAGTTGA
TCGAGCCTATTCTTCGGCCTTTCATGGACGCACAGACGGAGTTGGGGGGC
GCAAAGTACGTTACAGGAACCTTGGTGGCCCCCTACGTCTATAGCCTCCG
CCGCGGGCTGGAGAAGGCGAGATCGTCGCTGAATGGCATATGGCACTCCA
ACGGGCACTCGTTACCCGGTACACCAAATCAAGTCAAATGGCTGACCGCC
TCGAAGAAATGTGCGGAATACTCAAGGTGCCTTCACTGCAGGTGGTGCAG
GATGTGGAGACCAGTTGGAACTCAACGTTTTGTTTGGTAGAGCGTAGTAG
GCAACTGCGCGACGTAATCCAACTGCACGAGCGCCCCGAAAACATAGCAT
CACTGCTGACAGATGACGACTGGGAGGTGCTGAAGTTGATCGAGCCTATT
CTTCGGCCTTTCATGGACGCACAGACGGAGTTGGGGGGCGCAAAGTACGT
TACAGGAACCTTGGTGGCCCCCTACGTCTATAGCCTCCGCCGCGGGCTGG
AGAAGGCGAGATCGTCGCTGAATGGCATTGTCTCTCCTTGCGTTGAAGCT
CTGTGGGAAGATTTCATCAACCGGTGGGATACTGACAAGGACATGCTGAC
CTGTCTCTCCTTGCGTTGAAGCTCTGTGGGAAGATTTCATCAACCGGTGG
GATACTGACAAGGACATGCTGACCCAGCTGTTGGTGACTGCTTTGGACCC
TAGATCCAAGAGCTTGTGTGGAGTGGAAGAAGATGACCAAGACGCCGTGT
GGCAAGAAGTTCACAAAGCGGCAATGAAGATCGAAACTGGGGCACGAACA
TCAACCCAAGAGTCCAGTGGTGTCGTAGACATGACCACGTCTGAAGAAAC
TGGTACCACCTCATCGTCTATTCAGCAACCAGCTACACGGGCACGCACGT
CTTGTTTTATAGCTGCTGCACGTCGTCATTCTTCCAACGCACCGGCGTCC
AGCGCATCTGCCGACGCAGGATCATTTTACAGCTGTTGGTGACTGCTTTG
GACCCTAGATCCAAGAGCTTGTGTGGAGTGGAAGAAGATGACCAAGACGC
CGTGTGGCAAGAAGTTCACAAAGCGGCAATGAAGATCGAAACTGGGGCAC
GAACATCAACCCAAGAGTCCAGTGGTGTCGTAGACATGACCACGTCTGAA
GAAACTGGTACCACCTCATCGTCTATTCAGCAACCAGCTACACGGGCACG
CACGTCTTGTTTTATAGCTGCTGCACGTCGTCATTCTTCCAACGCACCGG
CGTCCAGCGCATCTGCCGACGCAGGATCATTTTACAATCCGCTGGTGTGG
TGGAAGATCAAGAAGAAGGACTACCCGTTGCTGGCCAACCTGGCTCGCCG
TGTGCTCACCATTCCTGCCTCACAGACCCAGTCAGAGCGCCTCTTTTCGT
CAGCCGGATTGATTGTGTCCAAGAGGCGCAACCGATTATCGCTTGAACAC
CTGCAGCTTCTCGTCTTTGTTCGCCAATCCGCTGGTGTGGTGGAAGATCA
AGAAGAAGGACTACCCGTTGCTGGCCAACCTGGCTCGCCGTGTGCTCACC
ATTCCTGCCTCACAGACCCAGTCAGAGCGCCTCTTTTCGTCAGCCGGATT
GATTGTGTCCAAGAGGCGCAACCGATTATCGCTTGAACACCTGCAGCTTC
TCGTCTTTGTTCGC
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