mRNA_H-elongata_contig74976.15175.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig74976.15175.1 vs. uniprot
Match: A0A6H5KMW9_9PHAE (Vacuolar protein sorting-associated protein 35 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KMW9_9PHAE) HSP 1 Score: 262 bits (670), Expect = 4.330e-80 Identity = 125/132 (94.70%), Postives = 130/132 (98.48%), Query Frame = 1
Query: 22 QVLDELRHLEDFFTTQNKQARQPMVGLYEQAQACTMVLPRLYLLNTVGACYIFSKEAPARDILKDLLEMTKGVQHPMRGLFLRNYFSHVTRDKLPDAGSPYEGEGGMVDDSVEFVLENFVEANKLWVRMHGQ 417
+VLDELRHLEDFFT+QN+QARQPMVGLYEQAQACTMVLPRLYLLNTVGACYI S+EAPARDILKDLLEMTKGVQHPMRGLFLRNYFSHVTRDKLPDAGSPYEG+GG VDDSVEFVLENFVEANKLWVRMHGQ
Sbjct: 64 KVLDELRHLEDFFTSQNRQARQPMVGLYEQAQACTMVLPRLYLLNTVGACYILSQEAPARDILKDLLEMTKGVQHPMRGLFLRNYFSHVTRDKLPDAGSPYEGDGGSVDDSVEFVLENFVEANKLWVRMHGQ 195
BLAST of mRNA_H-elongata_contig74976.15175.1 vs. uniprot
Match: F0YQH4_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YQH4_AURAN) HSP 1 Score: 174 bits (440), Expect = 1.100e-52 Identity = 87/132 (65.91%), Postives = 101/132 (76.52%), Query Frame = 1
Query: 22 QVLDELRHLEDFFTTQNKQARQPMVGLYEQAQACTMVLPRLYLLNTVGACYIFSKEAPARDILKDLLEMTKGVQHPMRGLFLRNYFSHVTRDKLPDAGSPYEGEGGMVDDSVEFVLENFVEANKLWVRMHGQ 417
+VLDEL HL+DFF+ Q LYE+AQAC VLPRLYLL TVGA YI S++APA+DIL DL+EM KGVQHPMRGLFLRNY + +DKLPDAGS YEG GG V D+V+FVL+NF E N+LWVRM Q
Sbjct: 66 KVLDELHHLDDFFSGLCASGTQAS-ELYEKAQACGDVLPRLYLLITVGAVYIKSRQAPAKDILNDLVEMAKGVQHPMRGLFLRNYLAQACKDKLPDAGSEYEGHGGDVSDAVDFVLQNFSETNRLWVRMQNQ 196
BLAST of mRNA_H-elongata_contig74976.15175.1 vs. uniprot
Match: W7TDU3_9STRA (Vacuolar protein sorting-associated protein 35 n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TDU3_9STRA) HSP 1 Score: 182 bits (461), Expect = 1.210e-50 Identity = 91/133 (68.42%), Postives = 107/133 (80.45%), Query Frame = 1
Query: 22 QVLDELRHLEDFFTTQNKQARQPMVGLYEQAQACTMVLPRLYLLNTVGACYIFSKEAPARDILKDLLEMTKGVQHPMRGLFLRNYFSHVTRDKLPDAGSPYEGE-GGMVDDSVEFVLENFVEANKLWVRMHGQ 417
+VLDELR++ED+FT KQ + P+V LYE+ Q+C VLPRLYLL TV YI S EAPARDILKDL+EM+KGVQHPMRGLFLRNY S V+RDKLPD G+PYEGE GG V D+ EF+L+NF EAN+LW RM Q
Sbjct: 64 KVLDELRYVEDYFTGLQKQGK-PVVELYEKVQSCGNVLPRLYLLITVAGVYIKSLEAPARDILKDLVEMSKGVQHPMRGLFLRNYLSQVSRDKLPDVGTPYEGEEGGSVQDAYEFILQNFSEANRLWCRMQQQ 195
BLAST of mRNA_H-elongata_contig74976.15175.1 vs. uniprot
Match: A0A7S0EY21_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EY21_9EUKA) HSP 1 Score: 169 bits (427), Expect = 5.140e-50 Identity = 83/129 (64.34%), Postives = 98/129 (75.97%), Query Frame = 1
Query: 31 DELRHLEDFFTTQNKQARQPMVGLYEQAQACTMVLPRLYLLNTVGACYIFSKEAPARDILKDLLEMTKGVQHPMRGLFLRNYFSHVTRDKLPDAGSPYEGEGGMVDDSVEFVLENFVEANKLWVRMHGQ 417
DELRH+E FF + K+ R+ M+ LYE Q VLPRLYLL +VG+ YI SKEAP++D+LKDL+EM +GVQHPMRGLFLRNY S ++DKLPD GS YEG GG V DSV F+L NF E NKLWVRM Q
Sbjct: 90 DELRHMEAFFEAEQKRGRR-MLELYELVQHAGNVLPRLYLLLSVGSVYIMSKEAPSKDVLKDLVEMCRGVQHPMRGLFLRNYLSQTSKDKLPDVGSEYEGAGGDVGDSVSFILSNFNEMNKLWVRMQHQ 217
BLAST of mRNA_H-elongata_contig74976.15175.1 vs. uniprot
Match: A0A482RTR6_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RTR6_9ARCH) HSP 1 Score: 164 bits (415), Expect = 8.720e-49 Identity = 77/132 (58.33%), Postives = 101/132 (76.52%), Query Frame = 1
Query: 22 QVLDELRHLEDFFTTQNKQARQPMVGLYEQAQACTMVLPRLYLLNTVGACYIFSKEAPARDILKDLLEMTKGVQHPMRGLFLRNYFSHVTRDKLPDAGSPYEGEGGMVDDSVEFVLENFVEANKLWVRMHGQ 417
++ DELR LE++ ++ + +V +YEQ Q+C V+PRLYLL VG YI SKEAPA+DILKDL+EM KGVQHPMRGLFLRNY + V++++LPD GSPYEG GG + D+ F+L+NFVE N+LWVR+ Q
Sbjct: 64 KIQDELRELEEYLLALSRNGKS-VVEIYEQVQSCANVVPRLYLLCCVGGVYITSKEAPAKDILKDLIEMIKGVQHPMRGLFLRNYLTLVSKNRLPDTGSPYEGIGGNIHDACSFLLQNFVETNRLWVRLQTQ 194
BLAST of mRNA_H-elongata_contig74976.15175.1 vs. uniprot
Match: A0A1Y1I153_KLENI (Vacuolar protein sorting-associated protein 35 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I153_KLENI) HSP 1 Score: 174 bits (441), Expect = 4.520e-48 Identity = 85/132 (64.39%), Postives = 102/132 (77.27%), Query Frame = 1
Query: 22 QVLDELRHLEDFFTTQNKQARQPMVGLYEQAQACTMVLPRLYLLNTVGACYIFSKEAPARDILKDLLEMTKGVQHPMRGLFLRNYFSHVTRDKLPDAGSPYEGEGGMVDDSVEFVLENFVEANKLWVRMHGQ 417
Q DELRHLE FF ++K+ R LYE Q +LPRLYLL TVG+ YI SKEAPA+DILKDL+EM++GVQHP+RGLFLR+Y S +++DKLPD GS YEGEGG + D+VEFVL+NF E NKLWVRM Q
Sbjct: 69 QTFDELRHLEAFFQEESKRGRSN-ADLYELVQHAGNILPRLYLLITVGSVYIRSKEAPAKDILKDLVEMSRGVQHPIRGLFLRSYLSQISKDKLPDTGSDYEGEGGTIHDAVEFVLQNFTEMNKLWVRMQHQ 199
BLAST of mRNA_H-elongata_contig74976.15175.1 vs. uniprot
Match: A0A7S4B0S6_CHRCT (Vacuolar protein sorting-associated protein 35 n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B0S6_CHRCT) HSP 1 Score: 171 bits (432), Expect = 7.310e-47 Identity = 86/131 (65.65%), Postives = 100/131 (76.34%), Query Frame = 1
Query: 25 VLDELRHLEDFFTTQNKQARQPMVGLYEQAQACTMVLPRLYLLNTVGACYIFSKEAPARDILKDLLEMTKGVQHPMRGLFLRNYFSHVTRDKLPDAGSPYEGEGGMVDDSVEFVLENFVEANKLWVRMHGQ 417
V ELRHLED+F+ ++K R+ M +YE Q VLPRLYLL TVG+ YI SKEAPA+D+LKDL+EM +GVQHPMRGLFLRNY S ++DKLPDAGS YEG GG V D+V FVL NF E NKLWVRM Q
Sbjct: 68 VTGELRHLEDYFSAEHKTGRR-MQEMYELVQHSGNVLPRLYLLLTVGSVYIKSKEAPAKDVLKDLVEMCRGVQHPMRGLFLRNYLSQASKDKLPDAGSEYEGSGGAVADAVSFVLTNFGEMNKLWVRMQHQ 197
BLAST of mRNA_H-elongata_contig74976.15175.1 vs. uniprot
Match: A0A2K1L3R3_PHYPA (Vacuolar protein sorting-associated protein 35 n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L3R3_PHYPA) HSP 1 Score: 170 bits (431), Expect = 1.260e-46 Identity = 83/128 (64.84%), Postives = 99/128 (77.34%), Query Frame = 1
Query: 34 ELRHLEDFFTTQNKQARQPMVGLYEQAQACTMVLPRLYLLNTVGACYIFSKEAPARDILKDLLEMTKGVQHPMRGLFLRNYFSHVTRDKLPDAGSPYEGEGGMVDDSVEFVLENFVEANKLWVRMHGQ 417
EL+ LE FF + K+ R P LYE Q +LPRLYLL TVG+ YI S EAPA+D+LKDL+EM +GVQHP+RGLFLRNY + ++RDKLPDAGSP+EGEGG V D+VEFVL+NF E NKLWVRM Q
Sbjct: 89 ELQRLEIFFQDETKRGRTP-ADLYELVQHAGNILPRLYLLCTVGSVYIMSNEAPAKDVLKDLVEMIRGVQHPIRGLFLRNYLTQISRDKLPDAGSPFEGEGGKVIDAVEFVLQNFTEMNKLWVRMQHQ 215
BLAST of mRNA_H-elongata_contig74976.15175.1 vs. uniprot
Match: A0A7S3H9X6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H9X6_9STRA) HSP 1 Score: 169 bits (429), Expect = 1.320e-46 Identity = 79/129 (61.24%), Postives = 101/129 (78.29%), Query Frame = 1
Query: 22 QVLDELRHLEDFFTTQNKQARQPMVGLYEQAQACTMVLPRLYLLNTVGACYIFSKEAPARDILKDLLEMTKGVQHPMRGLFLRNYFSHVTRDKLPDAGSPYEGEGGMVDDSVEFVLENFVEANKLWVRM 408
++LDELR LE++ ++ + R MV +YEQ Q CT V+PRLYLL VG YI SKEAPA+DILKDL+E+ KGVQHPMRGLFLRNY + V++ KLPD GSPYEG GG + D+ F+L+NF+E N+LWVR+
Sbjct: 66 RILDELRELEEYLSSLQRSGRS-MVEIYEQVQCCTNVVPRLYLLCCVGGVYITSKEAPAKDILKDLIEVIKGVQHPMRGLFLRNYLTLVSKGKLPDVGSPYEGVGGSIQDAYSFLLQNFIETNRLWVRL 193
BLAST of mRNA_H-elongata_contig74976.15175.1 vs. uniprot
Match: A0A7S2XXV8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXV8_9STRA) HSP 1 Score: 166 bits (420), Expect = 1.320e-46 Identity = 87/138 (63.04%), Postives = 99/138 (71.74%), Query Frame = 1
Query: 22 QVLDELRHLEDFFTTQNKQARQPMVGLYEQAQACTMVLPRLYLLNTVGACYIFSKEAPARDILKDLLEMTKGVQHPMRGLFLRNYFSHVTRDKLPDAGSPYEGE------GGMVDDSVEFVLENFVEANKLWVRMHGQ 417
+V DELR+LED+F +Q R PM LYEQ Q C VLPRLYLL TVG CYI SKEAPA+ +L DLLEMTKGVQHPM GLFLR+Y +H TRDKLPD GS Y G V D+ EFVL+NF EAN+LWVR+ Q
Sbjct: 69 KVSDELRYLEDYFEGLRRQGR-PMERLYEQVQGCGNVLPRLYLLITVGGCYIKSKEAPAKTVLADLLEMTKGVQHPMWGLFLRHYLAHQTRDKLPDVGSEYADPEDPACGGSGVADAYEFVLQNFQEANRLWVRLQHQ 205 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig74976.15175.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig74976.15175.1 >prot_H-elongata_contig74976.15175.1 ID=prot_H-elongata_contig74976.15175.1|Name=mRNA_H-elongata_contig74976.15175.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=139bp MNCIVLWQVLDELRHLEDFFTTQNKQARQPMVGLYEQAQACTMVLPRLYLback to top mRNA from alignment at H-elongata_contig74976:996..2118- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig74976.15175.1 ID=mRNA_H-elongata_contig74976.15175.1|Name=mRNA_H-elongata_contig74976.15175.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1123bp|location=Sequence derived from alignment at H-elongata_contig74976:996..2118- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig74976:996..2118- >mRNA_H-elongata_contig74976.15175.1 ID=mRNA_H-elongata_contig74976.15175.1|Name=mRNA_H-elongata_contig74976.15175.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=834bp|location=Sequence derived from alignment at H-elongata_contig74976:996..2118- (Himanthalia elongata Himel1 dioecious)back to top |