prot_H-elongata_contig74771.15156.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig74771.15156.1
Unique Nameprot_H-elongata_contig74771.15156.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length142
Homology
BLAST of mRNA_H-elongata_contig74771.15156.1 vs. uniprot
Match: A0A6H5L594_9PHAE (Ribosomal_L23eN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L594_9PHAE)

HSP 1 Score: 228 bits (582), Expect = 5.750e-75
Identity = 122/140 (87.14%), Postives = 131/140 (93.57%), Query Frame = 0
Query:    2 TSALKAKTAAKNVLKGTAKRKTKVRTSVHFYRPKTLVLARKPKYQTKAVPRAPRMNKHRLVKYPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDYDALEVANKIGII 141
            T A KAK AAKNVLKG+ KR+ KVRTSVHF+RPKTL  ARKPKY  KAVPR+P+MNKHR++K+PLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQD+DALEVANKIGII
Sbjct:    5 TKASKAKLAAKNVLKGSGKRRAKVRTSVHFHRPKTLTHARKPKYPAKAVPRSPQMNKHRIIKFPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDFDALEVANKIGII 144          
BLAST of mRNA_H-elongata_contig74771.15156.1 vs. uniprot
Match: A0A835Z6Z2_9STRA (Ribosomal protein L23/L15e core domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Z2_9STRA)

HSP 1 Score: 197 bits (502), Expect = 1.010e-62
Identity = 108/138 (78.26%), Postives = 117/138 (84.78%), Query Frame = 0
Query:    4 ALKAKTAAKNVLKGTAKRKTKVRTSVHFYRPKTLVLARKPKYQTKAVPRAPRMNKHRLVKYPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDYDALEVANKIGII 141
            A KAK AAK V KGT  +KTKVRT VHFYRPKTL   RKPKY  K+ P  P+M+K R++KYPLTTESAMKKIEDNNTLVFIVDVK+NKRQIK AV+ALY+I  Q VNTLIRPDG KKAYVRLTQDYDALEVANKIGII
Sbjct:   11 ATKAKAAAKAVTKGTGIKKTKVRTKVHFYRPKTLTHDRKPKYALKSTPSQPKMDKFRIIKYPLTTESAMKKIEDNNTLVFIVDVKANKRQIKAAVRALYEISCQKVNTLIRPDGLKKAYVRLTQDYDALEVANKIGII 148          
BLAST of mRNA_H-elongata_contig74771.15156.1 vs. uniprot
Match: A0A7S2STG4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STG4_9STRA)

HSP 1 Score: 188 bits (477), Expect = 8.350e-59
Identity = 99/136 (72.79%), Postives = 115/136 (84.56%), Query Frame = 0
Query:    6 KAKTAAKNVLKGTAKRKTKVRTSVHFYRPKTLVLARKPKYQTKAVPRAPRMNKHRLVKYPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDYDALEVANKIGII 141
            KA+ AAK + KG   R+ K RT VHFY+PKTL LARKPKY +KA     +M+KHR++KYPLTTESAMKKIEDNNTLVFIVDV +NKRQIKDAV  ++DI+ Q VNTLIRPDG+KKAYVRLTQDYDAL+VAN+IGII
Sbjct:   21 KAEDAAKQIKKGAGSREVKKRTKVHFYKPKTLKLARKPKYNSKATVGLQKMDKHRIIKYPLTTESAMKKIEDNNTLVFIVDVTANKRQIKDAVSQMHDIQCQKVNTLIRPDGQKKAYVRLTQDYDALDVANRIGII 156          
BLAST of mRNA_H-elongata_contig74771.15156.1 vs. uniprot
Match: A0A507EGM6_9FUNG (Ribosomal_L23eN domain-containing protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507EGM6_9FUNG)

HSP 1 Score: 181 bits (460), Expect = 5.900e-56
Identity = 97/141 (68.79%), Postives = 117/141 (82.98%), Query Frame = 0
Query:    2 TSALKAKTAAKNVLKGT-AKRKTKVRTSVHFYRPKTLVLARKPKYQTKAVPRAPRMNKHRLVKYPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDYDALEVANKIGII 141
            T+A+KA++A K  LKGT  KR TK+RT  HFYRPKTL LAR PKY  ++VPR P ++ +++V++PL TESAMKKIE+NNTLVFI DV+SNKRQIKDAVK LYD+E+  +NTLIRPDGKKKAYVRL  D DAL+VANKIG I
Sbjct:   35 TAAVKAQSAKKAALKGTNGKRVTKIRTKTHFYRPKTLKLARAPKYPRRSVPRTPELDSYKIVQFPLNTESAMKKIEENNTLVFICDVRSNKRQIKDAVKRLYDVEAAKINTLIRPDGKKKAYVRLAADIDALDVANKIGFI 175          
BLAST of mRNA_H-elongata_contig74771.15156.1 vs. uniprot
Match: A0A2D4BQZ7_PYTIN (60S ribosomal protein L23a putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BQZ7_PYTIN)

HSP 1 Score: 179 bits (453), Expect = 2.900e-55
Identity = 92/130 (70.77%), Postives = 111/130 (85.38%), Query Frame = 0
Query:   12 KNVLKGTAKRKTKVRTSVHFYRPKTLVLARKPKYQTKAVPRAPRMNKHRLVKYPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDYDALEVANKIGII 141
            K VLKG+  +  +VRT VHFY+PKTL LAR PKY  KAVP   +M+K+R++K PLTTESAMKKIEDNNTLVF+VD+ +NKRQIKDA+K LYDI++  VNTLIRPDG+KKAYVRLT DYDAL+VAN+IG+I
Sbjct:   19 KKVLKGSHGKAVQVRTKVHFYKPKTLKLARAPKYARKAVPTRNKMDKYRIIKSPLTTESAMKKIEDNNTLVFLVDILANKRQIKDAIKQLYDIKAAKVNTLIRPDGQKKAYVRLTADYDALDVANRIGVI 148          
BLAST of mRNA_H-elongata_contig74771.15156.1 vs. uniprot
Match: A0A507DX24_9FUNG (Ribosomal_L23eN domain-containing protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DX24_9FUNG)

HSP 1 Score: 180 bits (456), Expect = 3.380e-55
Identity = 96/141 (68.09%), Postives = 117/141 (82.98%), Query Frame = 0
Query:    2 TSALKAKTAAKNVLKGT-AKRKTKVRTSVHFYRPKTLVLARKPKYQTKAVPRAPRMNKHRLVKYPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDYDALEVANKIGII 141
            T+A+KA++A K  LKGT  KR TK+R+  HFYRPKTL LAR PKY  ++VPR P ++ +++V++PL TESAMKKIE+NNTLVFI DV+SNKRQIKDAVK LYD+E+  +NTLIRPDGKKKAYVRL  D DAL+VANKIG I
Sbjct:   46 TAAVKAQSAKKAALKGTNGKRVTKIRSKTHFYRPKTLKLARAPKYPRRSVPRTPELDSYKIVQFPLNTESAMKKIEENNTLVFICDVRSNKRQIKDAVKRLYDVEAAKINTLIRPDGKKKAYVRLAADIDALDVANKIGFI 186          
BLAST of mRNA_H-elongata_contig74771.15156.1 vs. uniprot
Match: A0A6U1J6R7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6U1J6R7_9STRA)

HSP 1 Score: 176 bits (447), Expect = 1.840e-54
Identity = 96/138 (69.57%), Postives = 110/138 (79.71%), Query Frame = 0
Query:    4 ALKAKTAAKNVLKGTAKRKTKVRTSVHFYRPKTLVLARKPKYQTKAVPRAPRMNKHRLVKYPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDYDALEVANKIGII 141
            A KA  AA  V  GT K+  K RT VHFYRPK+    + PKY  KA P   +M+K+R++KYPLTTESAMKKIEDNNTLVFIVDV +NKRQIKDAVKA+Y+I    VNTLIRPDG+KKAYVRLTQDYDAL+VAN+IGII
Sbjct:    3 AKKAAAAATAVRSGTGKKMVKRRTKVHFYRPKSFQPPKAPKYALKAAPARAKMDKYRVIKYPLTTESAMKKIEDNNTLVFIVDVAANKRQIKDAVKAMYEISCSKVNTLIRPDGQKKAYVRLTQDYDALDVANRIGII 140          
BLAST of mRNA_H-elongata_contig74771.15156.1 vs. uniprot
Match: A0A6J8B2C7_MYTCO (RP-L23Ae n=2 Tax=Mytilus TaxID=6548 RepID=A0A6J8B2C7_MYTCO)

HSP 1 Score: 177 bits (448), Expect = 3.460e-54
Identity = 95/131 (72.52%), Postives = 111/131 (84.73%), Query Frame = 0
Query:   12 KNVLKGT-AKRKTKVRTSVHFYRPKTLVLARKPKYQTKAVPRAPRMNKHRLVKYPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDYDALEVANKIGII 141
            KNV+KG  +KR  K+RTSVHFYRPKTL L R+PKY   ++PR  R++K+R+VK+PLTTESAMKKIEDNNTLVFIVD ++NK QIK AVK LYDI+   VNTLIRPDG+KKAYVRL  DYDAL+VANKIGII
Sbjct:   41 KNVVKGIHSKRSRKIRTSVHFYRPKTLSLPRQPKYPRTSIPRTDRLDKYRIVKFPLTTESAMKKIEDNNTLVFIVDKRANKPQIKLAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII 171          
BLAST of mRNA_H-elongata_contig74771.15156.1 vs. uniprot
Match: A0A3F2RWD3_9STRA (Ribosomal_L23eN domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RWD3_9STRA)

HSP 1 Score: 175 bits (444), Expect = 6.780e-54
Identity = 91/130 (70.00%), Postives = 109/130 (83.85%), Query Frame = 0
Query:   12 KNVLKGTAKRKTKVRTSVHFYRPKTLVLARKPKYQTKAVPRAPRMNKHRLVKYPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDYDALEVANKIGII 141
            K V+KG   +  K+RT VHFY+PKTL LAR P+Y  KA+P   +M+K+R++K PLTTESAMKKIEDNNTLVF+VD+ SNKRQIKDAVK LYDI+   VNTLIRPDG+KKAYVRLT DYDAL+VAN+IG+I
Sbjct:   19 KKVIKGAHGKVLKIRTKVHFYKPKTLQLARAPRYARKAMPSRNKMDKYRIIKSPLTTESAMKKIEDNNTLVFLVDLLSNKRQIKDAVKQLYDIKVAKVNTLIRPDGQKKAYVRLTADYDALDVANRIGVI 148          
BLAST of mRNA_H-elongata_contig74771.15156.1 vs. uniprot
Match: K3WU46_GLOUD (Ribosomal_L23eN domain-containing protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WU46_GLOUD)

HSP 1 Score: 175 bits (443), Expect = 1.030e-53
Identity = 92/136 (67.65%), Postives = 113/136 (83.09%), Query Frame = 0
Query:    6 KAKTAAKNVLKGTAKRKTKVRTSVHFYRPKTLVLARKPKYQTKAVPRAPRMNKHRLVKYPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDYDALEVANKIGII 141
            KA   +K + KG+  +  KVRT VHFY+PKTL LAR PKY  KAVP   +++K+R++K PLTTESAMKKIEDNNTLVF+VD+ +NKRQIKDAVK LY+I++  VNTLIRPDG+KKAYVRLT DYDAL+VAN+IG+I
Sbjct:   15 KAAVVSKKLTKGSHGKVIKVRTKVHFYKPKTLKLARAPKYARKAVPTRTKLDKYRIIKAPLTTESAMKKIEDNNTLVFLVDILANKRQIKDAVKQLYEIKAAKVNTLIRPDGQKKAYVRLTADYDALDVANRIGVI 150          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig74771.15156.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L594_9PHAE5.750e-7587.14Ribosomal_L23eN domain-containing protein n=2 Tax=... [more]
A0A835Z6Z2_9STRA1.010e-6278.26Ribosomal protein L23/L15e core domain-containing ... [more]
A0A7S2STG4_9STRA8.350e-5972.79Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A507EGM6_9FUNG5.900e-5668.79Ribosomal_L23eN domain-containing protein n=1 Tax=... [more]
A0A2D4BQZ7_PYTIN2.900e-5570.7760S ribosomal protein L23a putative n=1 Tax=Pythiu... [more]
A0A507DX24_9FUNG3.380e-5568.09Ribosomal_L23eN domain-containing protein n=1 Tax=... [more]
A0A6U1J6R7_9STRA1.840e-5469.57Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A6J8B2C7_MYTCO3.460e-5472.52RP-L23Ae n=2 Tax=Mytilus TaxID=6548 RepID=A0A6J8B2... [more]
A0A3F2RWD3_9STRA6.780e-5470.00Ribosomal_L23eN domain-containing protein n=2 Tax=... [more]
K3WU46_GLOUD1.030e-5367.65Ribosomal_L23eN domain-containing protein n=2 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013025Ribosomal protein L25/L23PFAMPF00276Ribosomal_L23coord: 62..121
e-value: 6.2E-14
score: 52.1
IPR013025Ribosomal protein L25/L23HAMAPMF_01369_ARibosomal_L23_Acoord: 61..141
score: 21.906
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 23..141
e-value: 6.4E-56
score: 189.7
IPR019985Ribosomal protein L23TIGRFAMTIGR03636TIGR03636coord: 65..141
e-value: 1.7E-28
score: 96.8
IPR005633Ribosomal protein L23/L25, N-terminalPFAMPF03939Ribosomal_L23eNcoord: 5..52
e-value: 4.1E-17
score: 62.1
NoneNo IPR availablePANTHERPTHR1162060S RIBOSOMAL PROTEIN L23Acoord: 5..141
IPR001014Ribosomal protein L23/L25, conserved sitePROSITEPS00050RIBOSOMAL_L23coord: 119..134
IPR012678Ribosomal protein L23/L15e core domain superfamilySUPERFAMILY54189Ribosomal proteins S24e, L23 and L15ecoord: 60..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig74771contigH-elongata_contig74771:191..2305 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig74771.15156.1mRNA_H-elongata_contig74771.15156.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig74771 191..2305 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig74771.15156.1 ID=prot_H-elongata_contig74771.15156.1|Name=mRNA_H-elongata_contig74771.15156.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=142bp
KTSALKAKTAAKNVLKGTAKRKTKVRTSVHFYRPKTLVLARKPKYQTKAV
PRAPRMNKHRLVKYPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKA
LYDIESQNVNTLIRPDGKKKAYVRLTQDYDALEVANKIGII*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013025Ribosomal_L25/23
IPR012677Nucleotide-bd_a/b_plait_sf
IPR019985Ribosomal_L23
IPR005633Ribosomal_L23/L25_N
IPR001014Ribosomal_L23/L25_CS
IPR012678Ribosomal_L23/L15e_core_dom_sf