mRNA_H-elongata_contig74771.15156.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig74771.15156.1 vs. uniprot
Match: A0A6H5L594_9PHAE (Ribosomal_L23eN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L594_9PHAE) HSP 1 Score: 228 bits (582), Expect = 5.750e-75 Identity = 122/140 (87.14%), Postives = 131/140 (93.57%), Query Frame = 1
Query: 4 TSALKAKTAAKNVLKGTAKRKTKVRTSVHFYRPKTLVLARKPKYQTKAVPRAPRMNKHRLVKYPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDYDALEVANKIGII 423
T A KAK AAKNVLKG+ KR+ KVRTSVHF+RPKTL ARKPKY KAVPR+P+MNKHR++K+PLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQD+DALEVANKIGII
Sbjct: 5 TKASKAKLAAKNVLKGSGKRRAKVRTSVHFHRPKTLTHARKPKYPAKAVPRSPQMNKHRIIKFPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDFDALEVANKIGII 144
BLAST of mRNA_H-elongata_contig74771.15156.1 vs. uniprot
Match: A0A835Z6Z2_9STRA (Ribosomal protein L23/L15e core domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Z2_9STRA) HSP 1 Score: 197 bits (502), Expect = 1.010e-62 Identity = 108/138 (78.26%), Postives = 117/138 (84.78%), Query Frame = 1
Query: 10 ALKAKTAAKNVLKGTAKRKTKVRTSVHFYRPKTLVLARKPKYQTKAVPRAPRMNKHRLVKYPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDYDALEVANKIGII 423
A KAK AAK V KGT +KTKVRT VHFYRPKTL RKPKY K+ P P+M+K R++KYPLTTESAMKKIEDNNTLVFIVDVK+NKRQIK AV+ALY+I Q VNTLIRPDG KKAYVRLTQDYDALEVANKIGII
Sbjct: 11 ATKAKAAAKAVTKGTGIKKTKVRTKVHFYRPKTLTHDRKPKYALKSTPSQPKMDKFRIIKYPLTTESAMKKIEDNNTLVFIVDVKANKRQIKAAVRALYEISCQKVNTLIRPDGLKKAYVRLTQDYDALEVANKIGII 148
BLAST of mRNA_H-elongata_contig74771.15156.1 vs. uniprot
Match: A0A7S2STG4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STG4_9STRA) HSP 1 Score: 188 bits (477), Expect = 8.350e-59 Identity = 99/136 (72.79%), Postives = 115/136 (84.56%), Query Frame = 1
Query: 16 KAKTAAKNVLKGTAKRKTKVRTSVHFYRPKTLVLARKPKYQTKAVPRAPRMNKHRLVKYPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDYDALEVANKIGII 423
KA+ AAK + KG R+ K RT VHFY+PKTL LARKPKY +KA +M+KHR++KYPLTTESAMKKIEDNNTLVFIVDV +NKRQIKDAV ++DI+ Q VNTLIRPDG+KKAYVRLTQDYDAL+VAN+IGII
Sbjct: 21 KAEDAAKQIKKGAGSREVKKRTKVHFYKPKTLKLARKPKYNSKATVGLQKMDKHRIIKYPLTTESAMKKIEDNNTLVFIVDVTANKRQIKDAVSQMHDIQCQKVNTLIRPDGQKKAYVRLTQDYDALDVANRIGII 156
BLAST of mRNA_H-elongata_contig74771.15156.1 vs. uniprot
Match: A0A507EGM6_9FUNG (Ribosomal_L23eN domain-containing protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507EGM6_9FUNG) HSP 1 Score: 181 bits (460), Expect = 5.900e-56 Identity = 97/141 (68.79%), Postives = 117/141 (82.98%), Query Frame = 1
Query: 4 TSALKAKTAAKNVLKGT-AKRKTKVRTSVHFYRPKTLVLARKPKYQTKAVPRAPRMNKHRLVKYPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDYDALEVANKIGII 423
T+A+KA++A K LKGT KR TK+RT HFYRPKTL LAR PKY ++VPR P ++ +++V++PL TESAMKKIE+NNTLVFI DV+SNKRQIKDAVK LYD+E+ +NTLIRPDGKKKAYVRL D DAL+VANKIG I
Sbjct: 35 TAAVKAQSAKKAALKGTNGKRVTKIRTKTHFYRPKTLKLARAPKYPRRSVPRTPELDSYKIVQFPLNTESAMKKIEENNTLVFICDVRSNKRQIKDAVKRLYDVEAAKINTLIRPDGKKKAYVRLAADIDALDVANKIGFI 175
BLAST of mRNA_H-elongata_contig74771.15156.1 vs. uniprot
Match: A0A2D4BQZ7_PYTIN (60S ribosomal protein L23a putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BQZ7_PYTIN) HSP 1 Score: 179 bits (453), Expect = 2.900e-55 Identity = 92/130 (70.77%), Postives = 111/130 (85.38%), Query Frame = 1
Query: 34 KNVLKGTAKRKTKVRTSVHFYRPKTLVLARKPKYQTKAVPRAPRMNKHRLVKYPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDYDALEVANKIGII 423
K VLKG+ + +VRT VHFY+PKTL LAR PKY KAVP +M+K+R++K PLTTESAMKKIEDNNTLVF+VD+ +NKRQIKDA+K LYDI++ VNTLIRPDG+KKAYVRLT DYDAL+VAN+IG+I
Sbjct: 19 KKVLKGSHGKAVQVRTKVHFYKPKTLKLARAPKYARKAVPTRNKMDKYRIIKSPLTTESAMKKIEDNNTLVFLVDILANKRQIKDAIKQLYDIKAAKVNTLIRPDGQKKAYVRLTADYDALDVANRIGVI 148
BLAST of mRNA_H-elongata_contig74771.15156.1 vs. uniprot
Match: A0A507DX24_9FUNG (Ribosomal_L23eN domain-containing protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DX24_9FUNG) HSP 1 Score: 180 bits (456), Expect = 3.380e-55 Identity = 96/141 (68.09%), Postives = 117/141 (82.98%), Query Frame = 1
Query: 4 TSALKAKTAAKNVLKGT-AKRKTKVRTSVHFYRPKTLVLARKPKYQTKAVPRAPRMNKHRLVKYPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDYDALEVANKIGII 423
T+A+KA++A K LKGT KR TK+R+ HFYRPKTL LAR PKY ++VPR P ++ +++V++PL TESAMKKIE+NNTLVFI DV+SNKRQIKDAVK LYD+E+ +NTLIRPDGKKKAYVRL D DAL+VANKIG I
Sbjct: 46 TAAVKAQSAKKAALKGTNGKRVTKIRSKTHFYRPKTLKLARAPKYPRRSVPRTPELDSYKIVQFPLNTESAMKKIEENNTLVFICDVRSNKRQIKDAVKRLYDVEAAKINTLIRPDGKKKAYVRLAADIDALDVANKIGFI 186
BLAST of mRNA_H-elongata_contig74771.15156.1 vs. uniprot
Match: A0A6U1J6R7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6U1J6R7_9STRA) HSP 1 Score: 176 bits (447), Expect = 1.840e-54 Identity = 96/138 (69.57%), Postives = 110/138 (79.71%), Query Frame = 1
Query: 10 ALKAKTAAKNVLKGTAKRKTKVRTSVHFYRPKTLVLARKPKYQTKAVPRAPRMNKHRLVKYPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDYDALEVANKIGII 423
A KA AA V GT K+ K RT VHFYRPK+ + PKY KA P +M+K+R++KYPLTTESAMKKIEDNNTLVFIVDV +NKRQIKDAVKA+Y+I VNTLIRPDG+KKAYVRLTQDYDAL+VAN+IGII
Sbjct: 3 AKKAAAAATAVRSGTGKKMVKRRTKVHFYRPKSFQPPKAPKYALKAAPARAKMDKYRVIKYPLTTESAMKKIEDNNTLVFIVDVAANKRQIKDAVKAMYEISCSKVNTLIRPDGQKKAYVRLTQDYDALDVANRIGII 140
BLAST of mRNA_H-elongata_contig74771.15156.1 vs. uniprot
Match: A0A6J8B2C7_MYTCO (RP-L23Ae n=2 Tax=Mytilus TaxID=6548 RepID=A0A6J8B2C7_MYTCO) HSP 1 Score: 177 bits (448), Expect = 3.460e-54 Identity = 95/131 (72.52%), Postives = 111/131 (84.73%), Query Frame = 1
Query: 34 KNVLKGT-AKRKTKVRTSVHFYRPKTLVLARKPKYQTKAVPRAPRMNKHRLVKYPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDYDALEVANKIGII 423
KNV+KG +KR K+RTSVHFYRPKTL L R+PKY ++PR R++K+R+VK+PLTTESAMKKIEDNNTLVFIVD ++NK QIK AVK LYDI+ VNTLIRPDG+KKAYVRL DYDAL+VANKIGII
Sbjct: 41 KNVVKGIHSKRSRKIRTSVHFYRPKTLSLPRQPKYPRTSIPRTDRLDKYRIVKFPLTTESAMKKIEDNNTLVFIVDKRANKPQIKLAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII 171
BLAST of mRNA_H-elongata_contig74771.15156.1 vs. uniprot
Match: A0A3F2RWD3_9STRA (Ribosomal_L23eN domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RWD3_9STRA) HSP 1 Score: 175 bits (444), Expect = 6.780e-54 Identity = 91/130 (70.00%), Postives = 109/130 (83.85%), Query Frame = 1
Query: 34 KNVLKGTAKRKTKVRTSVHFYRPKTLVLARKPKYQTKAVPRAPRMNKHRLVKYPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDYDALEVANKIGII 423
K V+KG + K+RT VHFY+PKTL LAR P+Y KA+P +M+K+R++K PLTTESAMKKIEDNNTLVF+VD+ SNKRQIKDAVK LYDI+ VNTLIRPDG+KKAYVRLT DYDAL+VAN+IG+I
Sbjct: 19 KKVIKGAHGKVLKIRTKVHFYKPKTLQLARAPRYARKAMPSRNKMDKYRIIKSPLTTESAMKKIEDNNTLVFLVDLLSNKRQIKDAVKQLYDIKVAKVNTLIRPDGQKKAYVRLTADYDALDVANRIGVI 148
BLAST of mRNA_H-elongata_contig74771.15156.1 vs. uniprot
Match: K3WU46_GLOUD (Ribosomal_L23eN domain-containing protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WU46_GLOUD) HSP 1 Score: 175 bits (443), Expect = 1.030e-53 Identity = 92/136 (67.65%), Postives = 113/136 (83.09%), Query Frame = 1
Query: 16 KAKTAAKNVLKGTAKRKTKVRTSVHFYRPKTLVLARKPKYQTKAVPRAPRMNKHRLVKYPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDYDALEVANKIGII 423
KA +K + KG+ + KVRT VHFY+PKTL LAR PKY KAVP +++K+R++K PLTTESAMKKIEDNNTLVF+VD+ +NKRQIKDAVK LY+I++ VNTLIRPDG+KKAYVRLT DYDAL+VAN+IG+I
Sbjct: 15 KAAVVSKKLTKGSHGKVIKVRTKVHFYKPKTLKLARAPKYARKAVPTRTKLDKYRIIKAPLTTESAMKKIEDNNTLVFLVDILANKRQIKDAVKQLYEIKAAKVNTLIRPDGQKKAYVRLTADYDALDVANRIGVI 150 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig74771.15156.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig74771.15156.1 >prot_H-elongata_contig74771.15156.1 ID=prot_H-elongata_contig74771.15156.1|Name=mRNA_H-elongata_contig74771.15156.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=142bp KTSALKAKTAAKNVLKGTAKRKTKVRTSVHFYRPKTLVLARKPKYQTKAVback to top mRNA from alignment at H-elongata_contig74771:191..2305+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig74771.15156.1 ID=mRNA_H-elongata_contig74771.15156.1|Name=mRNA_H-elongata_contig74771.15156.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2115bp|location=Sequence derived from alignment at H-elongata_contig74771:191..2305+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig74771:191..2305+ >mRNA_H-elongata_contig74771.15156.1 ID=mRNA_H-elongata_contig74771.15156.1|Name=mRNA_H-elongata_contig74771.15156.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=852bp|location=Sequence derived from alignment at H-elongata_contig74771:191..2305+ (Himanthalia elongata Himel1 dioecious)back to top |