prot_H-elongata_contig74762.15154.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig74762.15154.1
Unique Nameprot_H-elongata_contig74762.15154.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length106
Homology
BLAST of mRNA_H-elongata_contig74762.15154.1 vs. uniprot
Match: A0A6H5JBI8_9PHAE (Threonine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBI8_9PHAE)

HSP 1 Score: 201 bits (510), Expect = 7.550e-59
Identity = 97/108 (89.81%), Postives = 103/108 (95.37%), Query Frame = 0
Query:    1 RNLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQVEDEIISVLDLTEDILSRFGFDRRV--IMLSTRPEKSVGTDEIWELATEGLRGALRRKGWDYTV 106
            R+LPIRWAE+GTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQ+EDEIISVLDLTE ILSRFGFDRRV  IMLSTRPEKSVGTDEIW+LATEGL+ AL RKGWDY+V
Sbjct:  389 RHLPIRWAEMGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIISVLDLTEAILSRFGFDRRVYQIMLSTRPEKSVGTDEIWDLATEGLKAALERKGWDYSV 496          
BLAST of mRNA_H-elongata_contig74762.15154.1 vs. uniprot
Match: A0A7S2G206_9STRA (Threonine--tRNA ligase (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G206_9STRA)

HSP 1 Score: 180 bits (456), Expect = 5.550e-57
Identity = 83/102 (81.37%), Postives = 91/102 (89.22%), Query Frame = 0
Query:    3 LPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQVEDEIISVLDLTEDILSRFGFDRRVIMLSTRPEKSVGTDEIWELATEGLRGALRRKGWDY 104
            LP RWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQ+ DEI+ VLDLTE ILSRFGF    +MLSTRP+KSVG+D+IW+ ATE L+GAL RKGWDY
Sbjct:    1 LPKRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLTDEIVGVLDLTESILSRFGFTEYQVMLSTRPDKSVGSDDIWDAATEALKGALERKGWDY 102          
BLAST of mRNA_H-elongata_contig74762.15154.1 vs. uniprot
Match: A0A7S1GIN9_CYCTE (Threonine--tRNA ligase (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GIN9_CYCTE)

HSP 1 Score: 187 bits (474), Expect = 1.240e-56
Identity = 86/106 (81.13%), Postives = 95/106 (89.62%), Query Frame = 0
Query:    1 RNLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQVEDEIISVLDLTEDILSRFGFDRRVIMLSTRPEKSVGTDEIWELATEGLRGALRRKGWDYTV 106
            R LPIRW ELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQ++DEI+ VLDL E ILSRFGF++  +MLSTRPEKSVG+D+IWE AT GL GAL+ KGWDYTV
Sbjct:   57 RELPIRWGELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLQDEIVGVLDLAEKILSRFGFNKYDVMLSTRPEKSVGSDDIWEAATAGLEGALKAKGWDYTV 162          
BLAST of mRNA_H-elongata_contig74762.15154.1 vs. uniprot
Match: B5Y5F7_PHATC (Threonine--tRNA ligase n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y5F7_PHATC)

HSP 1 Score: 186 bits (471), Expect = 2.640e-53
Identity = 86/106 (81.13%), Postives = 95/106 (89.62%), Query Frame = 0
Query:    1 RNLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQVEDEIISVLDLTEDILSRFGFDRRVIMLSTRPEKSVGTDEIWELATEGLRGALRRKGWDYTV 106
            R+LP RWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQ++DEI+ VLDLTE ILSRFGFD+  +MLSTRPEKSVG+DEIW+ AT  L GAL+ KGWDY V
Sbjct:  379 RDLPFRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLQDEIVGVLDLTETILSRFGFDKYDVMLSTRPEKSVGSDEIWDAATVALEGALKVKGWDYNV 484          
BLAST of mRNA_H-elongata_contig74762.15154.1 vs. uniprot
Match: A0A1Z5K8X1_FISSO (Threonine--tRNA ligase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K8X1_FISSO)

HSP 1 Score: 185 bits (470), Expect = 3.140e-53
Identity = 85/106 (80.19%), Postives = 97/106 (91.51%), Query Frame = 0
Query:    1 RNLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQVEDEIISVLDLTEDILSRFGFDRRVIMLSTRPEKSVGTDEIWELATEGLRGALRRKGWDYTV 106
            R+LP RWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQ+EDEI+ VLDLTE ILSRFGFD+  IMLST+PEK+VG+D+IWE AT+ L GAL++KGW+Y V
Sbjct:  373 RDLPFRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIVGVLDLTERILSRFGFDKYDIMLSTKPEKAVGSDDIWEAATKALEGALKKKGWEYGV 478          
BLAST of mRNA_H-elongata_contig74762.15154.1 vs. uniprot
Match: A0A7S0D919_9EUKA (Threonine--tRNA ligase n=2 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0D919_9EUKA)

HSP 1 Score: 183 bits (464), Expect = 6.340e-53
Identity = 85/106 (80.19%), Postives = 93/106 (87.74%), Query Frame = 0
Query:    1 RNLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQVEDEIISVLDLTEDILSRFGFDRRVIMLSTRPEKSVGTDEIWELATEGLRGALRRKGWDYTV 106
            R LPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLP Q+EDE++ VLDLTE ILSRFGFD   I LSTRPEKSVG+D+IW+ A   LRGAL+RKGWD+ V
Sbjct:  275 RELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPNQLEDELVGVLDLTESILSRFGFDNYEINLSTRPEKSVGSDDIWDKAETALRGALKRKGWDFAV 380          
BLAST of mRNA_H-elongata_contig74762.15154.1 vs. uniprot
Match: A0A7S4MFY9_9EUKA (Threonine--tRNA ligase n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4MFY9_9EUKA)

HSP 1 Score: 179 bits (453), Expect = 1.080e-52
Identity = 82/106 (77.36%), Postives = 92/106 (86.79%), Query Frame = 0
Query:    1 RNLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQVEDEIISVLDLTEDILSRFGFDRRVIMLSTRPEKSVGTDEIWELATEGLRGALRRKGWDYTV 106
            R+LP+RW ELGTVYRYERSGTLHGL RVRGFTQDDAHIFCLPEQ+ DEI+ VLDLTE IL+RFGF    +MLSTRPEKSVG+D+IWE AT+ L+ AL RKGWDY V
Sbjct:  118 RDLPLRWGELGTVYRYERSGTLHGLFRVRGFTQDDAHIFCLPEQLSDEILDVLDLTETILTRFGFSEYEVMLSTRPEKSVGSDDIWEKATDALKDALGRKGWDYAV 223          
BLAST of mRNA_H-elongata_contig74762.15154.1 vs. uniprot
Match: A0A7S1VGN3_9STRA (Threonine--tRNA ligase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VGN3_9STRA)

HSP 1 Score: 181 bits (460), Expect = 1.240e-51
Identity = 84/106 (79.25%), Postives = 96/106 (90.57%), Query Frame = 0
Query:    1 RNLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQVEDEIISVLDLTEDILSRFGFDRRVIMLSTRPEKSVGTDEIWELATEGLRGALRRKGWDYTV 106
            R+LPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHI+CLP Q+++EI++VLDLTE ILSRFGFD+  +MLSTRPEKSVG DEIW+ AT  L+GAL  KGWDY+V
Sbjct:  399 RDLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIYCLPSQLQEEIVAVLDLTEGILSRFGFDQYDVMLSTRPEKSVGGDEIWDAATVALKGALVAKGWDYSV 504          
BLAST of mRNA_H-elongata_contig74762.15154.1 vs. uniprot
Match: A0A7S2V1W5_9STRA (Threonine--tRNA ligase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1W5_9STRA)

HSP 1 Score: 181 bits (458), Expect = 1.570e-51
Identity = 84/106 (79.25%), Postives = 92/106 (86.79%), Query Frame = 0
Query:    1 RNLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQVEDEIISVLDLTEDILSRFGFDRRVIMLSTRPEKSVGTDEIWELATEGLRGALRRKGWDYTV 106
            R LPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQ+EDEI+ V DL E ILS+FGF +  IMLSTRPEKSVG D+IW +ATE L+GAL RKGW Y +
Sbjct:  373 RELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIVGVCDLVETILSKFGFSKYEIMLSTRPEKSVGDDQIWGMATEALKGALDRKGWSYGI 478          
BLAST of mRNA_H-elongata_contig74762.15154.1 vs. uniprot
Match: A0A7S2S854_9STRA (Threonine--tRNA ligase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S854_9STRA)

HSP 1 Score: 181 bits (458), Expect = 2.090e-51
Identity = 83/106 (78.30%), Postives = 93/106 (87.74%), Query Frame = 0
Query:    1 RNLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQVEDEIISVLDLTEDILSRFGFDRRVIMLSTRPEKSVGTDEIWELATEGLRGALRRKGWDYTV 106
            R+LP RWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQ++ EI+ VL LTE IL+RFGFD+  IMLSTRPEKSVG+D+IW+ AT  L GAL  KGWDYT+
Sbjct:  388 RDLPFRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLQSEIVDVLSLTEQILTRFGFDKYEIMLSTRPEKSVGSDKIWDTATAALEGALDAKGWDYTI 493          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig74762.15154.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JBI8_9PHAE7.550e-5989.81Threonine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP... [more]
A0A7S2G206_9STRA5.550e-5781.37Threonine--tRNA ligase (Fragment) n=1 Tax=Florenci... [more]
A0A7S1GIN9_CYCTE1.240e-5681.13Threonine--tRNA ligase (Fragment) n=1 Tax=Cyclopho... [more]
B5Y5F7_PHATC2.640e-5381.13Threonine--tRNA ligase n=1 Tax=Phaeodactylum trico... [more]
A0A1Z5K8X1_FISSO3.140e-5380.19Threonine--tRNA ligase n=2 Tax=Fistulifera solaris... [more]
A0A7S0D919_9EUKA6.340e-5380.19Threonine--tRNA ligase n=2 Tax=Amorphochlora amoeb... [more]
A0A7S4MFY9_9EUKA1.080e-5277.36Threonine--tRNA ligase n=1 Tax=Prymnesium polylepi... [more]
A0A7S1VGN3_9STRA1.240e-5179.25Threonine--tRNA ligase n=1 Tax=Grammatophora ocean... [more]
A0A7S2V1W5_9STRA1.570e-5179.25Threonine--tRNA ligase n=1 Tax=Fibrocapsa japonica... [more]
A0A7S2S854_9STRA2.090e-5178.30Threonine--tRNA ligase n=1 Tax=Eucampia antarctica... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002314Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)PFAMPF00587tRNA-synt_2bcoord: 2..78
e-value: 4.8E-20
score: 72.3
NoneNo IPR availableGENE3D3.30.930.10coord: 1..106
e-value: 2.8E-34
score: 120.7
NoneNo IPR availablePANTHERPTHR11451:SF31THREONINE--TRNA LIGASEcoord: 1..105
NoneNo IPR availableSUPERFAMILY55681Class II aaRS and biotin synthetasescoord: 1..104
IPR002320Threonine-tRNA ligase, class IIaPANTHERPTHR11451TRNA SYNTHETASE-RELATEDcoord: 1..105
IPR006195Aminoacyl-tRNA synthetase, class IIPROSITEPS50862AA_TRNA_LIGASE_IIcoord: 1..106
score: 13.21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig74762contigH-elongata_contig74762:122..1165 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig74762.15154.1mRNA_H-elongata_contig74762.15154.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig74762 122..1165 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig74762.15154.1 ID=prot_H-elongata_contig74762.15154.1|Name=mRNA_H-elongata_contig74762.15154.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=106bp
RNLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQVEDEII
SVLDLTEDILSRFGFDRRVIMLSTRPEKSVGTDEIWELATEGLRGALRRK
GWDYTV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002314aa-tRNA-synt_IIb
IPR002320Thr-tRNA-ligase_IIa
IPR006195aa-tRNA-synth_II