mRNA_H-elongata_contig74728.15150.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig74728.15150.1 vs. uniprot
Match: A0A6H5KWA0_9PHAE (DUF1279 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KWA0_9PHAE) HSP 1 Score: 197 bits (500), Expect = 1.020e-56 Identity = 120/197 (60.91%), Postives = 146/197 (74.11%), Query Frame = 2
Query: 152 MLNRGIQILMISAFTQTSLSFVNLAVPIGRCCSLARSPVFIGVRTI--DVPSRANHLNVPLQMKVELEPEETVKKYGLEAGLFQAFKEGRKGGEEGGSGAATT-AKDLLKRYGSAYLITSITFALISFSICFLAVSNGVDISSLLGKLGIETSTPAETTGTVAVAYAIHKAASPIRFPPTVALTPVVAKFMGKDDNE 733
M RG L+++A ++S FV+ A R ++AR P +G + SR + L M +L P+ETVKKYGLEAGLF+A K+G K +G +GAATT AKDLLK+YGSAYLITSI+ +L+SF ICF+AVSNGVD++SLLGK+GIETS AETTGTVAVAYAIHKAASPIRFPPTVALTP VAKF+GK D E
Sbjct: 3 MFARG---LIVAALIESSSGFVSPAA--SRPGTIARLPTPVGAVALPRSAVSRGGR-SFTLGMVEKLGPDETVKKYGLEAGLFKALKDGNKEDADGEAGAATTTAKDLLKQYGSAYLITSISLSLVSFGICFVAVSNGVDMASLLGKVGIETSASAETTGTVAVAYAIHKAASPIRFPPTVALTPAVAKFLGKGDGE 193
BLAST of mRNA_H-elongata_contig74728.15150.1 vs. uniprot
Match: A0A7S2V8E4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8E4_9STRA) HSP 1 Score: 157 bits (396), Expect = 9.640e-42 Identity = 93/151 (61.59%), Postives = 107/151 (70.86%), Query Frame = 2
Query: 302 RANHLNVPLQMKVELEP------EETVKKYGLEAGLFQAFKEGRKGGEEGGSGAATTAKDLLKRYGSAYLITSITFALISFSICFLAVSNGVDISSLLGKLGIETSTPAETTGTVAVAYAIHKAASPIRFPPTVALTPVVAKFMGKDDNEA 736
+ N LNV L+ K EL+ EE +KYGLEAGLFQAFK GG AK+LL+RYGSAYLITSITFALISF IC+ V NGVD++ LL K+GI+ AET GT A+AYA HKAASPIRFPPTVALTPVVAK +GK D E+
Sbjct: 42 KKNTLNV-LKEKEELKTKDDKNLEEVTEKYGLEAGLFQAFK-------SGGENKGVQAKELLQRYGSAYLITSITFALISFGICYTLVDNGVDVAGLLEKVGIQAGDKAETAGTFAIAYAAHKAASPIRFPPTVALTPVVAKALGKKDIES 184
BLAST of mRNA_H-elongata_contig74728.15150.1 vs. uniprot
Match: A0A7S3F2S8_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3F2S8_9EUKA) HSP 1 Score: 152 bits (383), Expect = 1.320e-40 Identity = 84/121 (69.42%), Postives = 98/121 (80.99%), Query Frame = 2
Query: 368 KYGLEAGLFQAFKEGRKGGEEGGSGAATTAKDLLKRYGSAYLITSITFALISFSICFLAVSNGVDISSLLGKLGIETSTPAETTGTVAVAYAIHKAASPIRFPPTVALTPVVA-KFMGKDD 727
K+GLEAGLF AF+ G E+ GS A TA DLLKRYG AYL+TS + AL+SFS+C+LAV NGVDI+SLLGK+GIE S+ +ET GTV +AYAIHKAASPIRFPPTVALTPVVA K GK +
Sbjct: 4 KFGLEAGLFSAFRSAASGDEKKGSMA--TAGDLLKRYGGAYLLTSTSLALVSFSLCYLAVDNGVDIASLLGKVGIEVSSTSETVGTVGIAYAIHKAASPIRFPPTVALTPVVARKVFGKQE 122
BLAST of mRNA_H-elongata_contig74728.15150.1 vs. uniprot
Match: A0A8J2S4Y9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S4Y9_9STRA) HSP 1 Score: 153 bits (387), Expect = 1.720e-40 Identity = 84/138 (60.87%), Postives = 103/138 (74.64%), Query Frame = 2
Query: 323 PLQMKVELEPEETVKKYGLEAGLFQAFKEGRKGGEEGGSGAATTAKDLLKRYGSAYLITSITFALISFSICFLAVSNGVDISSLLGKLGIETSTPAETTGTVAVAYAIHKAASPIRFPPTVALTPVVAKFMGKDDNEA 736
PL +V+ E +ETV+K G+E GLF F G+ ATTA DLLK+YG AYL+TS +FA++SF+IC+ VSNGVD++ LLGK+GIE S A+T GT A+AYA HKAASPIRFPPTVALTPVVAK +GK D EA
Sbjct: 43 PLLAQVDEELQETVEKSGVEGGLFSIFT-----GDGDAKEKATTAGDLLKQYGGAYLLTSTSFAIVSFAICYTLVSNGVDVAGLLGKIGIEPSQNAQTGGTFAIAYAAHKAASPIRFPPTVALTPVVAKMLGKGDGEA 175
BLAST of mRNA_H-elongata_contig74728.15150.1 vs. uniprot
Match: A0A8J6CCF1_DIALT (DUF1279 domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CCF1_DIALT) HSP 1 Score: 149 bits (376), Expect = 1.740e-39 Identity = 81/131 (61.83%), Postives = 99/131 (75.57%), Query Frame = 2
Query: 335 KVELEPEETVKKYGLEAGLFQAF--KEGRKGGEEGGSGAATTAKDLLKRYGSAYLITSITFALISFSICFLAVSNGVDISSLLGKLGIETSTPAETTGTVAVAYAIHKAASPIRFPPTVALTPVVAKFMGK 721
K + PEE KK+GLEAG+F A K+G GG GA TTAKDLL +YG+AYL+TSI A++SF++C+L V NGVD+S+LL K+GI S E GTVA+AYA HKAASPIRFPPTVALTPVVA+ +GK
Sbjct: 5 KDDASPEEVTKKWGLEAGIFSALTNKDG-----SGGKGAMTTAKDLLAQYGAAYLLTSIPLAIVSFALCYLLVDNGVDVSALLAKVGISVSGGTEKVGTVAIAYAAHKAASPIRFPPTVALTPVVARLIGK 130
BLAST of mRNA_H-elongata_contig74728.15150.1 vs. uniprot
Match: A0A7S4D855_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D855_HETAK) HSP 1 Score: 150 bits (378), Expect = 3.440e-39 Identity = 78/136 (57.35%), Postives = 105/136 (77.21%), Query Frame = 2
Query: 317 NVPLQMKVELEPEETVKKYGLEAGLFQAFKEGRKGGEEGGSGAATTAKDLLKRYGSAYLITSITFALISFSICFLAVSNGVDISSLLGKLGIETSTPAETTGTVAVAYAIHKAASPIRFPPTVALTPVVAKFMGKD 724
++ L+ K++ E EET KKYGLEAGLF++ + E G ++AK+LLK+YGSAYL+TSI+ A++SFS+C++ V NGVD++ LL K+GIETS +E GT A+AYA HKAASPIRFPPTVALTPVVA +G++
Sbjct: 47 SLQLRAKIDDELEETTKKYGLEAGLFKSMQS-----EGDGESKVSSAKELLKKYGSAYLVTSISLAIVSFSLCYVMVDNGVDVAGLLSKVGIETSATSEKVGTFALAYAAHKAASPIRFPPTVALTPVVANLLGQE 177
BLAST of mRNA_H-elongata_contig74728.15150.1 vs. uniprot
Match: A0A835YRB9_9STRA (Transmembrane protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRB9_9STRA) HSP 1 Score: 149 bits (375), Expect = 1.150e-38 Identity = 84/156 (53.85%), Postives = 105/156 (67.31%), Query Frame = 2
Query: 299 SRANHLNVPLQMKVELE--------PEETVKKYGLEAGLFQAFKEGRKGGEEGGSGAATTAKDLLKRYGSAYLITSITFALISFSICFLAVSNGVDISSLLGKLGIETSTPAETTGTVAVAYAIHKAASPIRFPPTVALTPVVAKFMGKDDNEAVN 742
S A L+ L+M +L+ PE +KYGLEAGLF K GG AK+LLKRYG AYLITSI+FAL+SFSIC++ V +GVD+++LL K+GI+ + E GT A+AYA HKAASPIRFPPTVALTPVVAKF+GK +E +
Sbjct: 36 SCARRLSSALRMSTDLKEKETPDAAPEAVTEKYGLEAGLFSVMK-------SGGQNRGQQAKELLKRYGGAYLITSISFALVSFSICYVLVDSGVDVAALLNKVGIDATATTEKAGTFAIAYAAHKAASPIRFPPTVALTPVVAKFLGKKVDETAD 184
BLAST of mRNA_H-elongata_contig74728.15150.1 vs. uniprot
Match: A0A061R5E1_9CHLO (Protein fam210b-like n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R5E1_9CHLO) HSP 1 Score: 147 bits (372), Expect = 3.810e-38 Identity = 80/137 (58.39%), Postives = 102/137 (74.45%), Query Frame = 2
Query: 323 PLQMKVELEPEETVKKYGLEAGLFQAFKEGRKGGEEGGSGAATTAKDLLKRYGSAYLITSITFALISFSICFLAVSNGVDISSLLGKLGIETSTPAETTGTVAVAYAIHKAASPIRFPPTVALTPVVAKFMGKDDNE 733
P + K + ET +KYGLEAGLF+ F + + AT AK+LLKRYGSAYLITSI+FA++S++IC++ V GVD+++LLGK+GI TS +E GT A+AYA HKAASPIRFPPTVALTPVVAK +GK +E
Sbjct: 57 PEEPKTKSVGTETTEKYGLEAGLFKVFTDKSSDSAK----KATDAKELLKRYGSAYLITSISFAIVSYAICYVLVDQGVDVAALLGKVGISTSATSEKVGTAAIAYAAHKAASPIRFPPTVALTPVVAKLLGKKVDE 189
BLAST of mRNA_H-elongata_contig74728.15150.1 vs. uniprot
Match: A0A7S1UM22_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UM22_9STRA) HSP 1 Score: 147 bits (370), Expect = 3.970e-38 Identity = 77/124 (62.10%), Postives = 93/124 (75.00%), Query Frame = 2
Query: 353 EETVKKYGLEAGLFQAFKEGRKGGEEGGSGAATTAKDLLKRYGSAYLITSITFALISFSICFLAVSNGVDISSLLGKLGIETSTPAETTGTVAVAYAIHKAASPIRFPPTVALTPVVAKFMGKD 724
EE +KYGLE GLF+ K G KG + TAKDLL +YG+AYL TSI+ AL+SF+ C+ V NGVD++SLL K+GI S +ET GTVA+AYA+HKAASPIRFPPTVALTPVVA+F G D
Sbjct: 47 EEVTEKYGLEVGLFKTLKSGEKG-------SGQTAKDLLAKYGAAYLTTSISLALVSFATCYYLVDNGVDVASLLAKVGISVSGTSETAGTVAIAYAVHKAASPIRFPPTVALTPVVARFFGND 163
BLAST of mRNA_H-elongata_contig74728.15150.1 vs. uniprot
Match: A0A0M0JGR7_9EUKA (DUF1279 domain-containing protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JGR7_9EUKA) HSP 1 Score: 144 bits (362), Expect = 4.990e-37 Identity = 81/139 (58.27%), Postives = 103/139 (74.10%), Query Frame = 2
Query: 314 LNVPLQMKVELEPEETVKKYGLEAGLFQAFKEGRKGGEEGGSG-AATTAKDLLKRYGSAYLITSITFALISFSICFLAVSNGVDISSLLGKLGIETSTPAETTGTVAVAYAIHKAASPIRFPPTVALTPVVAKFMGKDD 727
L P + + P+E V+KYGLEAGLF A K +GGSG TA +LLKRYG AYL+TS +FA++SF++C+LAV NGVD+++LL K+G+E P E GT+ +AYAIHKAASPIRFPPTVALTPVVAK + K+D
Sbjct: 33 LGSPTCAQKQQTPDEVVEKYGLEAGLFSALK-------KGGSGDGKVTAGELLKRYGGAYLLTSTSFAIVSFALCYLAVDNGVDVAALLEKVGLEVVVPKEA-GTIGLAYAIHKAASPIRFPPTVALTPVVAKRLFKND 163 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig74728.15150.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig74728.15150.1 >prot_H-elongata_contig74728.15150.1 ID=prot_H-elongata_contig74728.15150.1|Name=mRNA_H-elongata_contig74728.15150.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=198bp MLNRGIQILMISAFTQTSLSFVNLAVPIGRCCSLARSPVFIGVRTIDVPSback to top mRNA from alignment at H-elongata_contig74728:1376..2901+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig74728.15150.1 ID=mRNA_H-elongata_contig74728.15150.1|Name=mRNA_H-elongata_contig74728.15150.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1526bp|location=Sequence derived from alignment at H-elongata_contig74728:1376..2901+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig74728:1376..2901+ >mRNA_H-elongata_contig74728.15150.1 ID=mRNA_H-elongata_contig74728.15150.1|Name=mRNA_H-elongata_contig74728.15150.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1188bp|location=Sequence derived from alignment at H-elongata_contig74728:1376..2901+ (Himanthalia elongata Himel1 dioecious)back to top |