prot_H-elongata_contig74679.15147.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig74679.15147.1
Unique Nameprot_H-elongata_contig74679.15147.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length50
Homology
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BLAST of mRNA_H-elongata_contig74679.15147.1 vs. uniprot
Match: D8LIA4_ECTSI (Kinesin-associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIA4_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 9.210e-16
Identity = 35/50 (70.00%), Postives = 44/50 (88.00%), Query Frame = 0 
Query:    1 IRNISTWTFRSQEGMKNPDREYKERTLWESNIEPLLDLATETENQDLLVE 50
            +RNIS WTFRSQE M +P++EY+ERTLW+  +EPLLDLATETE+ +LLVE
Sbjct:  516 VRNISMWTFRSQEAMDSPEKEYRERTLWDPLVEPLLDLATETESHELLVE 565
[Close]
BLAST of mRNA_H-elongata_contig74679.15147.1 vs. uniprot
Match: A0A812QE41_SYMMI (KAP115 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812QE41_SYMMI)

HSP 1 Score: 53.1 bits (126), Expect = 8.320e-7
Identity = 24/50 (48.00%), Postives = 35/50 (70.00%), Query Frame = 0 
Query:    1 IRNISTWTFRSQEGMKNPDREYKERTLWESNIEPLLDLATETENQDLLVE 50
            IRNIS W+F SQ+ ++N D +YK R LW  +I+ +  LA + ++ DLLVE
Sbjct:  189 IRNISLWSFNSQQSLENADLQYKYRGLWSPHIKNICRLAVDADSHDLLVE 238
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig74679.15147.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LIA4_ECTSI9.210e-1670.00Kinesin-associated protein n=1 Tax=Ectocarpus sili... [more]
A0A812QE41_SYMMI8.320e-748.00KAP115 protein n=1 Tax=Symbiodinium microadriaticu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig74679contigH-elongata_contig74679:256..405 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig74679.15147.1mRNA_H-elongata_contig74679.15147.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig74679 256..405 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig74679.15147.1 ID=prot_H-elongata_contig74679.15147.1|Name=mRNA_H-elongata_contig74679.15147.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=50bp
IRNISTWTFRSQEGMKNPDREYKERTLWESNIEPLLDLATETENQDLLVE
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