prot_H-elongata_contig7466.15145.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7466.15145.1
Unique Nameprot_H-elongata_contig7466.15145.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length1064
Homology
BLAST of mRNA_H-elongata_contig7466.15145.1 vs. uniprot
Match: D8LET6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LET6_ECTSI)

HSP 1 Score: 590 bits (1521), Expect = 1.360e-179
Identity = 473/1155 (40.95%), Postives = 610/1155 (52.81%), Query Frame = 0
Query:    1 DDIPERSGSSSSDVMSACALTLLRILSHAANCKIRKASSVGIPSY-------QMERKDR-----STNSAFN---SECNGLNSIHSCPDTYHRCIISDAVVGVVGSCLSRVAHEIDLAAGPRGAMESVLYFLLPSAGMLVREQAALALSAIAGEGYDAMLQASRSAGELHLLSVATDGARRKSSAPEGVVV------SDGADLAKEGP------QLKLWRHFCVGMVEGTGAQIVLDSALPGPSSIPNSPLLRERATRAMAFVCLCAGATRASPTVLAGLVLLLQCRAGDAIGVSVTRALWVLARLPENRKALARIRVVASLM--------PLCEWTLEQGYRELHLYCLATL-----YVLSQ--EPENATQVLEQNSSIAKFVSWGTPAKVTSLGSLGMMR----KENAKTTSCLGIIRRCLLRPEGLKTVAEGLVSFSLLELVLRLLRIEIWEKSASPLMLREALGILFTIQDRAEYRSYLKRICGGKIFTVEDTMSLQLERPGTLYAALTNDAVIGLACVSMTLESRRRLAVNGTMESVERLLAHGM-LEWEHGRED----DHHAVQNLMKLTKNLSSVSEAHEKLSSRLLLPLIVRLWKGNANEKASRLASHVLGNLSRSKVPGVQNRLFRCHLAAEFD-------SLGERFTEAQLLNSAREQLPIAFVP-----------------CRKELDPNGSLPSSVFRHKNADSGVP-KGNINSNQGGRT------RALQREARLNAQRRLRLTPDALWGDKAHRLTYGAENSVTSSTKAPTVTVAKSLMQRRSSNRDPDAEG------------MNEEETKGVGIRETNAIMTSKMGSAVAY---GSVGVCNPASDGYKYILSVGTS-YADTASLEKPTATATVPLRWQSRVMSLSSLRDH---GGNRSHTSL---TASWKIRARPGKCGKIKSKRYMKDHPAMPVVCGWQPPRNTRENVRDEEGETRPDTLT-DVLATPCTVGGCKPRTARLNEDNN---PGSTKDRRRQSKWAVLHRGDDSILSEIQE-RASTAPTHSDGKVVVRSLG--------PGASAEWNPPSVVIKSGSSRLQIQWAVLDRLYRFTRHREGNDSRCSSAGPKHHKTNNFASCNTRFATAQPAKHSPI-SNGLLHPPGEYAGGRQSTE 1037
            D I +R   S   ++S CALTLL +LS  A     + SSVG+ S        +M R  R     ST  + N   SE  G ++ +    +     +  ++V + GSCLSRVA +IDLAAGP GAMESVL  LLPSAG+LVR+QAAL LSAIAG+G+  +        +      A   A R S               D A    +G       +L LW  FC G+VEGTGAQI+LD ALPGPSS PNS LLRERA  A + VCLCAG   AS  V  G+V LL+CR G+ +G + T ALW L R+P NRKA A+ R    L+         L   TL +    +  +C   L     Y +S   EPENA Q+     SIAK VSW TP       S  + R    ++NAKT SCLG+IRRCLL PEG+K +A+GL S+SL++LVL+LLR+ +W KS  PL LREA G+LF +QDRAEYR Y + ICGG  F VEDT++LQL+RPG  YAAL  DAV+GLA +S+TL SRRRLAVNGT+ESV+RLLA  M +E   GRE     DH AV+N+ KL KNLSSV EAH +LS+R LLPLI RLW+ + +E  S+LA HVL NLSRS VPGV+NRLF+ HLAAE +       S G   T A +     +Q P A VP                      D   SL SSVFR      G   KGN  ++            AL+R+AR +AQ RLRL P ALWG +A  +  G          A  V   ++     ++  D +A G            +N    +    R+ +     K+G A A     SVG  +    G   I+  GT+  +  ASL++P  TA VPLRWQSRV++LSSLRD    G  R   S+    A  + RAR       +SK   +        C      N     ++ +  T  D+ + D    P  +G  +   A      +   PG  K            RG + ILS ++  R STAP HSDGKV++R LG        PG S E  PPSVV + GSSRL+ +  +LDR+YRFTRH+E +    + +G     TN   +   + +   PA  + + S+G    PG+ AGG  S E
Sbjct:  785 DSITDRPSMSPRHILSKCALTLLGLLSQVAKHHAHRRSSVGVESTGNDPNCKRMSRSGRTGSTSSTKVSSNIDHSETTGKSNSNGGNSSIGG--VPHSIVAIAGSCLSRVAQDIDLAAGPPGAMESVLALLLPSAGLLVRQQAALTLSAIAGQGFQTL-------SDFRTEKAAVAAAARWSCGXXXXXXXXXXXXDDAAQWPGQGEGGRERKRLLLWGTFCAGVVEGTGAQIILDCALPGPSSRPNSRLLRERAALAFSLVCLCAGLRPASSAVQGGIVSLLRCRDGEVVGGAATAALWALCRVPVNRKAFAKTRCFDYLLLTSITRSRALVCCTLSENEGVVTSFCSKRLQKRQIYPISLLVEPENALQITNHGGSIAKLVSWATPLNGDH-NSEDLSRMITVEDNAKTASCLGVIRRCLLLPEGMKALADGLASYSLIQLVLQLLRVGVWVKSVLPLTLREAQGVLFAVQDRAEYRGYCESICGGDPFGVEDTLALQLQRPGVKYAALAGDAVVGLASLSVTLASRRRLAVNGTVESVDRLLARSMAIESGGGREKGSKGDHEAVRNMAKLLKNLSSVPEAHRRLSNRPLLPLITRLWEESPDEATSQLACHVLANLSRSDVPGVRNRLFQLHLAAESEVVRRTRASGGAGTTPAPIA----KQKPSAAVPRQGFAASSTATRAQHGETNSRDDDTVSLSSSVFRRDGFVEGHRYKGNGCTSDAKSAAVLLSQEALRRDARRDAQYRLRLMPAALWGSRARHVDDGCSGGEDGLDVAGIVEKQRTRQTFLTAGLD-EASGAVAVESATVTSTLNARHDRHQAKRDGSCPSKQKIGGAAAVVVQPSVGDFDDG--GGDGIVFQGTAKVSQAASLKRPAVTANVPLRWQSRVVALSSLRDSLNGGATRGSPSMGQRMAKARCRARQ------RSKENRQHEFTSTTACKDMNKGNNSNETQESKEVTSSDSASPDQRCRPSKIGDTRMTLAEWTSREDVHVPGGEKST---DDSGGCGRGAEGILSLVEGGRPSTAPMHSDGKVIMRPLGLGQVDNGVPGGSLE--PPSVVFEPGSSRLRTRRIILDRVYRFTRHQEQSTIMGAPSGST--DTNRGTTEFNKGSAPDPAPQAGLTSSGSPEDPGK-AGGHFSKE 1908          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7466.15145.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LET6_ECTSI1.360e-17940.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 119..581

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7466contigH-elongata_contig7466:1026..7023 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7466.15145.1mRNA_H-elongata_contig7466.15145.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7466 1026..7023 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7466.15145.1 ID=prot_H-elongata_contig7466.15145.1|Name=mRNA_H-elongata_contig7466.15145.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1064bp
DDIPERSGSSSSDVMSACALTLLRILSHAANCKIRKASSVGIPSYQMERK
DRSTNSAFNSECNGLNSIHSCPDTYHRCIISDAVVGVVGSCLSRVAHEID
LAAGPRGAMESVLYFLLPSAGMLVREQAALALSAIAGEGYDAMLQASRSA
GELHLLSVATDGARRKSSAPEGVVVSDGADLAKEGPQLKLWRHFCVGMVE
GTGAQIVLDSALPGPSSIPNSPLLRERATRAMAFVCLCAGATRASPTVLA
GLVLLLQCRAGDAIGVSVTRALWVLARLPENRKALARIRVVASLMPLCEW
TLEQGYRELHLYCLATLYVLSQEPENATQVLEQNSSIAKFVSWGTPAKVT
SLGSLGMMRKENAKTTSCLGIIRRCLLRPEGLKTVAEGLVSFSLLELVLR
LLRIEIWEKSASPLMLREALGILFTIQDRAEYRSYLKRICGGKIFTVEDT
MSLQLERPGTLYAALTNDAVIGLACVSMTLESRRRLAVNGTMESVERLLA
HGMLEWEHGREDDHHAVQNLMKLTKNLSSVSEAHEKLSSRLLLPLIVRLW
KGNANEKASRLASHVLGNLSRSKVPGVQNRLFRCHLAAEFDSLGERFTEA
QLLNSAREQLPIAFVPCRKELDPNGSLPSSVFRHKNADSGVPKGNINSNQ
GGRTRALQREARLNAQRRLRLTPDALWGDKAHRLTYGAENSVTSSTKAPT
VTVAKSLMQRRSSNRDPDAEGMNEEETKGVGIRETNAIMTSKMGSAVAYG
SVGVCNPASDGYKYILSVGTSYADTASLEKPTATATVPLRWQSRVMSLSS
LRDHGGNRSHTSLTASWKIRARPGKCGKIKSKRYMKDHPAMPVVCGWQPP
RNTRENVRDEEGETRPDTLTDVLATPCTVGGCKPRTARLNEDNNPGSTKD
RRRQSKWAVLHRGDDSILSEIQERASTAPTHSDGKVVVRSLGPGASAEWN
PPSVVIKSGSSRLQIQWAVLDRLYRFTRHREGNDSRCSSAGPKHHKTNNF
ASCNTRFATAQPAKHSPISNGLLHPPGEYAGGRQSTEGSNGGRNNQYPNK
MVPWKPPLLFQFCK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold