prot_H-elongata_contig74283.15116.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig74283.15116.1
Unique Nameprot_H-elongata_contig74283.15116.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length174
Homology
BLAST of mRNA_H-elongata_contig74283.15116.1 vs. uniprot
Match: D8LIP7_ECTSI (DEAD box helicase DEAD/DEAH box helicase-like protein (Partial) (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIP7_ECTSI)

HSP 1 Score: 281 bits (718), Expect = 4.810e-88
Identity = 145/169 (85.80%), Postives = 148/169 (87.57%), Query Frame = 0
Query:    2 QVVAGNDLMCKSRTGSGKTLAFAIPIIEALDRQQSQEQGVQHQRGGRGRLFSRAAYGRFPRAICVTPTRELAKQVEREFKRIAPGLSSLAVYGGVAMGPQIGEMRRGVDVIVGTPGRIIDHIEHRNLNLGEIQFCVLDEADLMLQMGFQEPVEEIFKEMPENKQTTLWS 170
            +VV+G DLMCKSRTGSGKTLAFAIPIIEALDRQ   E  VQ      GRLFSR AYGRFPRAICV PTRELAKQVEREF RIAP LSSLAVYGG A GPQIGEMRRGVD+IVGTPGRIIDHIE  NLNL EIQFCVLDEADLMLQMGFQEPVEEIFKEMPENKQTTLWS
Sbjct:  220 KVVSGQDLMCKSRTGSGKTLAFAIPIIEALDRQSGGE-SVQRXXXXXGRLFSRGAYGRFPRAICVAPTRELAKQVEREFNRIAPELSSLAVYGGTAQGPQIGEMRRGVDIIVGTPGRIIDHIEQGNLNLSEIQFCVLDEADLMLQMGFQEPVEEIFKEMPENKQTTLWS 387          
BLAST of mRNA_H-elongata_contig74283.15116.1 vs. uniprot
Match: A0A835YGZ8_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGZ8_9STRA)

HSP 1 Score: 181 bits (459), Expect = 4.990e-50
Identity = 101/174 (58.05%), Postives = 125/174 (71.84%), Query Frame = 0
Query:    3 VVAGNDLMCKSRTGSGKTLAFAIPIIEALDRQQSQEQGVQHQRGGRGRLFSRAAYGRFPRAICVTPTRELAKQVEREFKRIAPGLSSLAVYGGVAMGPQIGEMRRGVDVIVGTPGRIIDHIEHRNLNLGEIQFCVLDEADLMLQMGFQEPVEEIFKEMPEN--KQTTLWSATMP 174
            +++G D++CKSRTGSGKTLAFAIPIIE+++R+              GR   R   GR P AI VTPTRELAKQV+REF+R+AP L SL+VYGG  +  Q+  +R GVDV+VGTPGR+ID +E R L+L   +F VLDEAD MLQMGFQ+ VE+IF  MP    +QT LWSATMP
Sbjct:  138 IMSGKDMICKSRTGSGKTLAFAIPIIESIERE--------------GRPPRR---GRKPVAIVVTPTRELAKQVQREFERVAPQLQSLSVYGGSPVQAQVAALRGGVDVVVGTPGRVIDLLESRALDLNASRFAVLDEADQMLQMGFQDDVEKIFGFMPAAGARQTMLWSATMP 294          
BLAST of mRNA_H-elongata_contig74283.15116.1 vs. uniprot
Match: A0A7W8KFZ7_9DEIO (RNA helicase n=1 Tax=Deinococcus metalli TaxID=1141878 RepID=A0A7W8KFZ7_9DEIO)

HSP 1 Score: 168 bits (426), Expect = 3.740e-46
Identity = 88/172 (51.16%), Postives = 119/172 (69.19%), Query Frame = 0
Query:    2 QVVAGNDLMCKSRTGSGKTLAFAIPIIEALDRQQSQEQGVQHQRGGRGRLFSRAAYGRFPRAICVTPTRELAKQVEREFKRIAPGLSSLAVYGGVAMGPQIGEMRRGVDVIVGTPGRIIDHIEHRNLNLGEIQFCVLDEADLMLQMGFQEPVEEIFKEMPENKQTTLWSATM 173
            Q + G DL+ ++RTG+GKTLAFA+PII+ L+   S+E+G                  R PRAI V PTRELAKQV  EF +    L+++ VYGG + GPQ G +RRGVD++VGTPGR+IDH+E  NL+LG+++F VLDEAD ML +GF E +E I ++ PE +QT L+SAT+
Sbjct:   33 QTLQGRDLIGRARTGTGKTLAFALPIIQTLE--PSRERG------------------RLPRAIIVAPTRELAKQVADEFAKSGGALTTVTVYGGASYGPQEGALRRGVDIVVGTPGRLIDHLERGNLDLGDVKFAVLDEADEMLSVGFAEAIETILEKTPETRQTMLFSATL 184          
BLAST of mRNA_H-elongata_contig74283.15116.1 vs. uniprot
Match: L1IQZ7_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IQZ7_GUITC)

HSP 1 Score: 164 bits (415), Expect = 4.990e-46
Identity = 80/169 (47.34%), Postives = 117/169 (69.23%), Query Frame = 0
Query:    6 GNDLMCKSRTGSGKTLAFAIPIIEALDRQQSQEQGVQHQRGGRGRLFSRAAYGRFPRAICVTPTRELAKQVEREFKRIAPGLSSLAVYGGVAMGPQIGEMRRGVDVIVGTPGRIIDHIEHRNLNLGEIQFCVLDEADLMLQMGFQEPVEEIFKEMPENKQTTLWSATMP 174
            G D++ +SRTGSGKT+AFA+P+IE +   ++++                  +GR P  + + PTRELA Q++REF RI P ++S  VYGGV++G Q+  +R+GVDV+VGTPGR+IDH+ +  L++  ++  +LDEAD ML+MGFQ+ VE I + +P +KQT LWSATMP
Sbjct:   38 GKDVVVRSRTGSGKTIAFALPVIEKILANKTRK------------------HGRLPSCLVIAPTRELAIQIDREFTRIQPEVASTCVYGGVSIGMQVSALRKGVDVVVGTPGRLIDHLVNGTLDVSAVETFILDEADEMLKMGFQDDVERIIEYLPPSKQTNLWSATMP 188          
BLAST of mRNA_H-elongata_contig74283.15116.1 vs. uniprot
Match: Q1J0S9_DEIGD (RNA helicase n=5 Tax=Deinococcus TaxID=1298 RepID=Q1J0S9_DEIGD)

HSP 1 Score: 167 bits (423), Expect = 9.460e-46
Identity = 90/170 (52.94%), Postives = 115/170 (67.65%), Query Frame = 0
Query:    4 VAGNDLMCKSRTGSGKTLAFAIPIIEALDRQQSQEQGVQHQRGGRGRLFSRAAYGRFPRAICVTPTRELAKQVEREFKRIAPGLSSLAVYGGVAMGPQIGEMRRGVDVIVGTPGRIIDHIEHRNLNLGEIQFCVLDEADLMLQMGFQEPVEEIFKEMPENKQTTLWSATM 173
            +AG DL+ ++RTG+GKTLAFA+PII+ L             RG R R       GR PRAI + PTRELAKQV  EF +  P LS++ VYGG A GPQ   +RRGVDV+VGTPGR+IDH+E  NL+L  IQ+ VLDEAD ML +GF + +E I ++ P  +QT L+SAT+
Sbjct:   35 LAGKDLIGRARTGTGKTLAFALPIIQNLTAPDG--------RGSRER-------GRLPRAIVIAPTRELAKQVAEEFSKSGPQLSTVTVYGGAAYGPQENALRRGVDVVVGTPGRLIDHLERGNLDLSAIQYAVLDEADEMLSVGFADAIETILQQTPAARQTMLFSATL 189          
BLAST of mRNA_H-elongata_contig74283.15116.1 vs. uniprot
Match: A0A345IGB7_9DEIO (RNA helicase n=7 Tax=Deinococcus TaxID=1298 RepID=A0A345IGB7_9DEIO)

HSP 1 Score: 167 bits (423), Expect = 9.830e-46
Identity = 90/168 (53.57%), Postives = 115/168 (68.45%), Query Frame = 0
Query:    6 GNDLMCKSRTGSGKTLAFAIPIIEALDRQQSQEQGVQHQRGGRGRLFSRAAYGRFPRAICVTPTRELAKQVEREFKRIAPGLSSLAVYGGVAMGPQIGEMRRGVDVIVGTPGRIIDHIEHRNLNLGEIQFCVLDEADLMLQMGFQEPVEEIFKEMPENKQTTLWSATM 173
            G DL+ ++RTG+GKTLAFA+PII  L+   S+E+                   R PRAI V PTRELAKQV  EF + APGLS++ VYGG A GPQ   +RRGVDV+VGTPGR+IDH+E  NL+L  +QF VLDEAD ML +GF + +E I ++ PE +QT L+SAT+
Sbjct:   37 GRDLIGRARTGTGKTLAFALPIIMKLE--PSRERS------------------RLPRAIVVAPTRELAKQVADEFSKSAPGLSTVTVYGGAAYGPQENALRRGVDVVVGTPGRLIDHLERGNLDLSAVQFAVLDEADEMLSVGFADAIETILQKTPEERQTMLFSATL 184          
BLAST of mRNA_H-elongata_contig74283.15116.1 vs. uniprot
Match: A0A0D3AXI7_BRAOL (Helicase ATP-binding domain-containing protein n=1 Tax=Brassica oleracea var. oleracea TaxID=109376 RepID=A0A0D3AXI7_BRAOL)

HSP 1 Score: 161 bits (408), Expect = 1.350e-45
Identity = 87/169 (51.48%), Postives = 116/169 (68.64%), Query Frame = 0
Query:    6 GNDLMCKSRTGSGKTLAFAIPIIEALDRQQSQEQGVQHQRGGRGRLFSRAAYGRFPRAICVTPTRELAKQVEREFKRIAPGLSSLAVYGGVAMGPQIGEMRRGVDVIVGTPGRIIDHIEHRNLNLGEIQFCVLDEADLMLQMGFQEPVEEIFKEMPENKQTTLWSATMP 174
            G D++ +++TG+GKTLAF IPII+ L  Q            G    F ++  GR P+ + + PTRELAKQVE+E K  AP LS++ VYGGV+   Q   + RGVDV+VGTPGRIID IE R+L LGE++F VLDEAD ML +GF+E VE I + +P+ +Q+ L+SATMP
Sbjct:  128 GRDIIARAKTGTGKTLAFGIPIIKRLTEQ-----------AGDYSAFRKS--GRLPKFLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEFLVLDEADQMLAVGFEEAVESILENLPQKRQSMLFSATMP 283          
BLAST of mRNA_H-elongata_contig74283.15116.1 vs. uniprot
Match: A0A7S0QES0_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QES0_9CRYP)

HSP 1 Score: 162 bits (409), Expect = 1.660e-45
Identity = 84/170 (49.41%), Postives = 111/170 (65.29%), Query Frame = 0
Query:    6 GNDLMCKSRTGSGKTLAFAIPIIEALDRQQSQEQGVQHQRGGRGRLFSRAAYGRFPRAICVTPTRELAKQVEREFKRIAPGLSSLAVYGGVAMGPQIGEMRRGVDVIVGTPGRIIDHIEHRNLNLGEIQFCVLDEADLMLQMGFQEPVEEIFKEMPEN-KQTTLWSATMP 174
            G D++ +SRTGSGKT+ FA+P++E L +                     +A GR PR I + PTRELA Q+ REF+RI P LS++ +YGG +  PQ   +RRGVDV+VGTPGR+ DH+    L L +++  +LDEAD ML+MGFQE VE I K +PE  +QT LWSATMP
Sbjct:  135 GKDMVVRSRTGSGKTIGFALPVVEKLIK------------------GDHSARGRKPRCIVLAPTRELAVQIHREFERIGPQLSTVCIYGGASYIPQESALRRGVDVVVGTPGRVTDHMNKGTLMLDQVKIFILDEADEMLKMGFQEDVENIMKSVPEQGRQTNLWSATMP 286          
BLAST of mRNA_H-elongata_contig74283.15116.1 vs. uniprot
Match: A0A2I9D1Y6_9DEIO (RNA helicase n=2 Tax=Deinococcus TaxID=1298 RepID=A0A2I9D1Y6_9DEIO)

HSP 1 Score: 165 bits (417), Expect = 6.800e-45
Identity = 88/172 (51.16%), Postives = 117/172 (68.02%), Query Frame = 0
Query:    2 QVVAGNDLMCKSRTGSGKTLAFAIPIIEALDRQQSQEQGVQHQRGGRGRLFSRAAYGRFPRAICVTPTRELAKQVEREFKRIAPGLSSLAVYGGVAMGPQIGEMRRGVDVIVGTPGRIIDHIEHRNLNLGEIQFCVLDEADLMLQMGFQEPVEEIFKEMPENKQTTLWSATM 173
            Q +AG DL+ ++RTG+GKTLA+A+PII+ L+   S+E+G                  R PRAI + PTRELAKQV  EF +    L+++ VYGG + GPQ G +RRGVDV+VGTPGRIIDH+E  NL+L  IQ+ VLDEAD ML +GF + +E I +  PE +QT L+SAT+
Sbjct:   33 QTLAGKDLIGRARTGTGKTLAYALPIIQNLE--PSRERG------------------RLPRAIILAPTRELAKQVAEEFSKSGQHLATVTVYGGASYGPQEGALRRGVDVVVGTPGRIIDHLERGNLDLSNIQYTVLDEADEMLSVGFADAIETILQRTPETRQTMLFSATL 184          
BLAST of mRNA_H-elongata_contig74283.15116.1 vs. uniprot
Match: A0A4S4CHD9_9DEIO (RNA helicase n=2 Tax=Deinococcus TaxID=1298 RepID=A0A4S4CHD9_9DEIO)

HSP 1 Score: 164 bits (416), Expect = 1.010e-44
Identity = 89/172 (51.74%), Postives = 117/172 (68.02%), Query Frame = 0
Query:    2 QVVAGNDLMCKSRTGSGKTLAFAIPIIEALDRQQSQEQGVQHQRGGRGRLFSRAAYGRFPRAICVTPTRELAKQVEREFKRIAPGLSSLAVYGGVAMGPQIGEMRRGVDVIVGTPGRIIDHIEHRNLNLGEIQFCVLDEADLMLQMGFQEPVEEIFKEMPENKQTTLWSATM 173
            Q +AG DL+ ++RTG+GKTLAFA+PII+AL    S+E+G                  R PRAI V PTRELAKQV  EF +    L ++ VYGG + GPQ   +RRGVD++VGTPGR+IDH+E  NL+L E++F VLDEAD ML +GF E +E I ++ PE +QT L+SAT+
Sbjct:   33 QTLAGKDLIGRARTGTGKTLAFALPIIQALA--PSRERG------------------RLPRAIIVAPTRELAKQVADEFSKSGGELVTVTVYGGASYGPQESALRRGVDIVVGTPGRLIDHLERGNLDLTEVKFAVLDEADEMLSVGFAEAIETILQKTPEERQTMLFSATL 184          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig74283.15116.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIP7_ECTSI4.810e-8885.80DEAD box helicase DEAD/DEAH box helicase-like prot... [more]
A0A835YGZ8_9STRA4.990e-5058.05P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7W8KFZ7_9DEIO3.740e-4651.16RNA helicase n=1 Tax=Deinococcus metalli TaxID=114... [more]
L1IQZ7_GUITC4.990e-4647.34Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
Q1J0S9_DEIGD9.460e-4652.94RNA helicase n=5 Tax=Deinococcus TaxID=1298 RepID=... [more]
A0A345IGB7_9DEIO9.830e-4653.57RNA helicase n=7 Tax=Deinococcus TaxID=1298 RepID=... [more]
A0A0D3AXI7_BRAOL1.350e-4551.48Helicase ATP-binding domain-containing protein n=1... [more]
A0A7S0QES0_9CRYP1.660e-4549.41Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A2I9D1Y6_9DEIO6.800e-4551.16RNA helicase n=2 Tax=Deinococcus TaxID=1298 RepID=... [more]
A0A4S4CHD9_9DEIO1.010e-4451.74RNA helicase n=2 Tax=Deinococcus TaxID=1298 RepID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 2..173
e-value: 7.1E-25
score: 98.6
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1..174
score: 26.133
NoneNo IPR availableGENE3D3.40.50.300coord: 1..174
e-value: 6.8E-56
score: 190.8
NoneNo IPR availablePANTHERPTHR24031:SF346DEAD (ASP-GLU-ALA-ASP) BOX HELICASE 21coord: 4..174
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 4..174
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 4..174
e-value: 1.0E-40
score: 139.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 3..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig74283contigH-elongata_contig74283:240..2891 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig74283.15116.1mRNA_H-elongata_contig74283.15116.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig74283 240..2891 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig74283.15116.1 ID=prot_H-elongata_contig74283.15116.1|Name=mRNA_H-elongata_contig74283.15116.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=174bp
MQVVAGNDLMCKSRTGSGKTLAFAIPIIEALDRQQSQEQGVQHQRGGRGR
LFSRAAYGRFPRAICVTPTRELAKQVEREFKRIAPGLSSLAVYGGVAMGP
QIGEMRRGVDVIVGTPGRIIDHIEHRNLNLGEIQFCVLDEADLMLQMGFQ
EPVEEIFKEMPENKQTTLWSATMP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase