mRNA_H-elongata_contig11961.1512.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig11961.1512.1
Unique NamemRNA_H-elongata_contig11961.1512.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig11961.1512.1 vs. uniprot
Match: D7G5S1_ECTSI (Putaive LSm10 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5S1_ECTSI)

HSP 1 Score: 165 bits (417), Expect = 6.390e-50
Identity = 90/138 (65.22%), Postives = 107/138 (77.54%), Query Frame = 1 
Query:    1 GRRPSVAKKRINPLERTLAILVQSMRGNKVVVEMKNDVEISGLLEETDQNMK----WVLTALLTHAKK----SLSMVDVRYTSAQGSVRKMDVALVQGKMIRYVHIPDEVDAISNLQTYMRAMEKSSASYRRNMIKPK 390
            G RP   +K+ +PLE+TLAIL+QSMRGNK+VVEMKND EISG+LEETD+NMK    W+    LT ++     SLSMVDVR T+  GSVRKMDV LVQGKMIRYVHIPD+VDAISNLQ +MR M++    Y RNM+KPK
Sbjct:    6 GNRPQPRQKKTSPLEKTLAILIQSMRGNKIVVEMKNDAEISGILEETDRNMKAATVWLAAYGLTCSRAGPAPSLSMVDVRQTNPDGSVRKMDVVLVQGKMIRYVHIPDKVDAISNLQKHMRTMDQQG--YHRNMLKPK 141
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BLAST of mRNA_H-elongata_contig11961.1512.1 vs. uniprot
Match: A0A6H5JYY5_9PHAE (Sm domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYY5_9PHAE)

HSP 1 Score: 120 bits (300), Expect = 6.540e-33
Identity = 65/99 (65.66%), Postives = 75/99 (75.76%), Query Frame = 1 
Query:  100 MKNDVEISGLLEETDQNMKWVLTALLTHAKKSLSMVDVRYTSAQGSVRKMDVALVQGKMIRYVHIPDEVDAISNLQTYMRAMEKSSASYRRNMIKPKTT 396
            MKND EISG+LEETD+NM             +LSMVDVR T+  GSVRKMDV LVQGKMIRYVHIPD+VDAISNLQ +MR M++    YRRNM+KPKT+
Sbjct:    1 MKNDAEISGILEETDRNM-------------NLSMVDVRQTNPDGSVRKMDVVLVQGKMIRYVHIPDKVDAISNLQKHMRTMDQQG--YRRNMLKPKTS 84
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BLAST of mRNA_H-elongata_contig11961.1512.1 vs. uniprot
Match: W4H8K5_9STRA (Sm domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H8K5_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 7.600e-15
Identity = 38/118 (32.20%), Postives = 68/118 (57.63%), Query Frame = 1 
Query:   46 RTLAILVQSMRGNKVVVEMKNDVEISGLLEETDQNMKWVLTALLTHAKKSLSMVDVRYTSAQGSVRKMDVALVQGKMIRYVHIPDEVDAISNLQTYMRAMEKSSASYRRNMIKPKTTP 399
            R++ +L+QSM G  V +E+K +  + G +EE  +                + + +V+ TS QG++  +D   V GKMI +VH+PD ++   +L+ YM+ ++K+ + Y+R+  KP TTP
Sbjct:    6 RSVVVLLQSMLGMDVKIELKTEYVLEGRVEEVGEG------------NMDVRLTNVKQTSPQGAIVHLDEVFVMGKMILFVHLPDRLNVAVHLRDYMQMVDKNRSMYQRSTRKPATTP 111
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BLAST of mRNA_H-elongata_contig11961.1512.1 vs. uniprot
Match: A0A024UUS1_9STRA (Sm domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UUS1_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 1.700e-13
Identity = 41/119 (34.45%), Postives = 67/119 (56.30%), Query Frame = 1 
Query:   46 RTLAILVQSMRGNKVVVEMKNDVEISGLLEETDQ-NMKWVLTALLTHAKKSLSMVDVRYTSAQGSVRKMDVALVQGKMIRYVHIPDEVDAISNLQTYMRAMEKSSASYRRNMIKPKTTP 399
            R++ +L+QSM G  V +E+K +  + G +EE  + NM   LT              V+ TS QG++  +D   V GKMI +VH+PD ++  ++L+ YM  ++K+   Y+R+  KP T P
Sbjct:    6 RSVVLLLQSMLGMDVKIELKTEYTLEGRVEEVGEGNMDVRLTG-------------VKQTSPQGAIVHLDEVFVMGKMILFVHLPDRLNVAAHLRDYMHLVDKNKNLYQRSTRKPPTKP 111
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BLAST of mRNA_H-elongata_contig11961.1512.1 vs. uniprot
Match: A0A1V9ZKH8_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZKH8_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 1.680e-12
Identity = 41/118 (34.75%), Postives = 63/118 (53.39%), Query Frame = 1 
Query:   46 RTLAILVQSMRGNKVVVEMKNDVEISGLLEETDQNMKWVLTALLTHAKKSLSMVDVRYTSAQGSVRKMDVALVQGKMIRYVHIPDEVDAISNLQTYMRAMEKSSASYRRNMIKPKTTP 399
            RTL I++QSM G +V +E+K +  + G +EE  + M       L+H         VR     G V + D   V GKMI YVHIPD V+  ++++ Y+  +E++   Y+R + KP   P
Sbjct:    8 RTLLIVLQSMLGMEVTIELKTEHVLVGTVEEVTEGMD----VRLSH---------VRQVGPSGRVLEFDELYVMGKMILYVHIPDRVNINAHMKDYVHMVERNKKMYKRAVRKPTANP 112
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BLAST of mRNA_H-elongata_contig11961.1512.1 vs. uniprot
Match: A0A1W0ABR9_9STRA (Sm domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ABR9_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 2.510e-11
Identity = 35/114 (30.70%), Postives = 62/114 (54.39%), Query Frame = 1 
Query:   46 RTLAILVQSMRGNKVVVEMKNDVEISGLLEETDQNMKWVLTALLTHAKKSLSMVDVRYTSAQGSVRKMDVALVQGKMIRYVHIPDEVDAISNLQTYMRAMEKSSASYRRNMIKP 387
            RTL I++QSM G +V++++K + ++ G +EE    M              + + +V   +  G +  +D   V GKMI YVHIPD +   ++L+ Y++ +E++   Y R + KP
Sbjct:    8 RTLLIVLQSMLGMEVMIDLKTEYQLKGTIEEVGDGM-------------DVRLSNVSQIAPNGKMLLLDELFVMGKMILYVHIPDRIHLNTHLKEYVQMVERNKKMYNRAVRKP 108
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BLAST of mRNA_H-elongata_contig11961.1512.1 vs. uniprot
Match: A0A5D6XV54_9STRA (Sm domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XV54_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 5.920e-11
Identity = 36/109 (33.03%), Postives = 60/109 (55.05%), Query Frame = 1 
Query:   46 RTLAILVQSMRGNKVVVEMKNDVEISGLLEETDQNMKWVLTALLTHAKKSLSMVDVRYTSAQGSVRKMDVALVQGKMIRYVHIPDEVDAISNLQTYMRAMEKSSASYRR 372
            R+L +L++S+ G +V V++KND  + G++ E   +M +             +MVD   T   G++ +MD   V G+ I YVHIPD ++   +LQ Y R + +S+  Y R
Sbjct:   42 RSLLLLLKSLVGLRVRVDLKNDATVEGVVAEVVHDMDF-------------TMVDACETKPNGAMVRMDEVFVMGRTILYVHIPDRINLTQHLQQYTRMVRQSATMYTR 137
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BLAST of mRNA_H-elongata_contig11961.1512.1 vs. uniprot
Match: A0A8K1CIL4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIL4_PYTOL)

HSP 1 Score: 65.1 bits (157), Expect = 7.600e-11
Identity = 39/126 (30.95%), Postives = 65/126 (51.59%), Query Frame = 1 
Query:   22 KKRINPLERTLAILVQSMRGNKVVVEMKNDVEISGLLEETDQNMKWVLTALLTHAKKSLSMVDVRYTSAQGSVRKMDVALVQGKMIRYVHIPDEVDAISNLQTYMRAMEKSSASYRRNMIKPKTTP 399
            KKR  P  R+L +L++S+ G +V +++KND  + G++EE   +M + L             +D   T   G   +++   V GK + YVHIPD ++   +LQ Y R + +S   Y+R+  K    P
Sbjct:   14 KKRRRP--RSLLLLLKSLAGLRVRIDLKNDCVVEGIVEEVLHDMDFTL-------------LDACETKPNGRTVRLEEVFVMGKTVLYVHIPDRINISQHLQQYNRMIRQSQDMYKRDKRKAPLPP 124
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BLAST of mRNA_H-elongata_contig11961.1512.1 vs. uniprot
Match: A0A7S2RGP2_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RGP2_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.330e-10
Identity = 38/112 (33.93%), Postives = 62/112 (55.36%), Query Frame = 1 
Query:   46 RTLAILVQSMRGNKVVVEMKNDVEISGLLEETDQNMKWVLTALLTHAKKSLSMVDVRYTSAQGSVRKMDVALVQGKMIRYVHIPDEVDAISNLQTYMRAMEKSSASYRRNMI 381
            R+L  L++ M G+ + VE+KND+ +SG L+  D  M  VL       K     ++ +     G    M+VAL+ GK IRY+H PD++D    L+++ +   K+ A ++RN I
Sbjct:   25 RSLCSLLECMEGDVITVELKNDLVVSGYLDGVDNGMNLVL------GKAHQYWMEGKNKGRHGP--NMEVALISGKRIRYIHFPDKLDMEGELRSWHK--RKNKAKFKRNYI 126
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BLAST of mRNA_H-elongata_contig11961.1512.1 vs. uniprot
Match: A0A1Y1HWH1_KLENI (Sm domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HWH1_KLENI)

HSP 1 Score: 63.2 bits (152), Expect = 4.390e-10
Identity = 37/124 (29.84%), Postives = 63/124 (50.81%), Query Frame = 1 
Query:   16 VAKKRINPLERTLAILVQSMRGNKVVVEMKNDVEISGLLEETDQNMKWVLTALLTHAKKSLSMVDVRYTSAQGSVRKMDVALVQGKMIRYVHIPDEVDAISNLQTYMRAMEKSSASYRRNMIKP 387
            + KK+    ER+L  ++Q++ G KV+VE+KNDV + G+LEE D  M  V+              D    + QG   ++ +  +QG+ IR++HIP  V+    ++     + K+   Y + M  P
Sbjct:    1 MVKKKGRASERSLICVIQALVGMKVLVELKNDVTVKGVLEECDLGMNIVIK-------------DAIQENLQGIKTELALMFIQGRRIRFIHIPKSVNVSDAVEAQRERIRKAEVMYTQAMGGP 111
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11961.1512.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5S1_ECTSI6.390e-5065.22Putaive LSm10 protein n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5JYY5_9PHAE6.540e-3365.66Sm domain-containing protein n=1 Tax=Ectocarpus sp... [more]
W4H8K5_9STRA7.600e-1532.20Sm domain-containing protein n=1 Tax=Aphanomyces a... [more]
A0A024UUS1_9STRA1.700e-1334.45Sm domain-containing protein n=1 Tax=Aphanomyces i... [more]
A0A1V9ZKH8_9STRA1.680e-1234.75Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A1W0ABR9_9STRA2.510e-1130.70Sm domain-containing protein n=1 Tax=Thraustotheca... [more]
A0A5D6XV54_9STRA5.920e-1133.03Sm domain-containing protein n=1 Tax=Pythium brass... [more]
A0A8K1CIL4_PYTOL7.600e-1130.95Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S2RGP2_9STRA1.330e-1033.93Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A1Y1HWH1_KLENI4.390e-1029.84Sm domain-containing protein n=1 Tax=Klebsormidium... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11961contigH-elongata_contig11961:58..6899 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score72.4
Seed ortholog evalue1.8e-10
Seed eggNOG ortholog157072.XP_008861500.1
Preferred nameLSM10
GOsGO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005683,GO:0005737,GO:0006139,GO:0006351,GO:0006353,GO:0006366,GO:0006369,GO:0006396,GO:0006397,GO:0006398,GO:0006725,GO:0006807,GO:0007346,GO:0008150,GO:0008152,GO:0008334,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0010564,GO:0015030,GO:0016070,GO:0016071,GO:0016604,GO:0017069,GO:0018130,GO:0019438,GO:0030532,GO:0031123,GO:0031124,GO:0031974,GO:0031981,GO:0032774,GO:0032991,GO:0034641,GO:0034645,GO:0034654,GO:0035363,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045787,GO:0045931,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051726,GO:0065007,GO:0070013,GO:0071208,GO:0071209,GO:0071254,GO:0071704,GO:0090068,GO:0090304,GO:0097159,GO:0097659,GO:0120114,GO:1900087,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902806,GO:1902808,GO:1990904,GO:2000045
EggNOG free text desc.spliceosomal snRNP assembly
EggNOG OGsCOG1958@1,KOG3428@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPutaive LSm10 protein
Ec32 orthologEc-12_008900.1
Exons5
Model size405
Cds size405
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11961.1512.1prot_H-elongata_contig11961.1512.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig11961 58..6899 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929700.4297123-CDS-H-elongata_contig11961:57..1261622929700.4297123-CDS-H-elongata_contig11961:57..126Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11961 58..126 +
1691679124.0343812-CDS-H-elongata_contig11961:57..1261691679124.0343812-CDS-H-elongata_contig11961:57..126Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11961 58..126 +
1622929700.44889-CDS-H-elongata_contig11961:5363..54881622929700.44889-CDS-H-elongata_contig11961:5363..5488Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11961 5364..5488 +
1691679124.0476344-CDS-H-elongata_contig11961:5363..54881691679124.0476344-CDS-H-elongata_contig11961:5363..5488Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11961 5364..5488 +
1622929700.4667585-CDS-H-elongata_contig11961:5800..58371622929700.4667585-CDS-H-elongata_contig11961:5800..5837Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11961 5801..5837 +
1691679124.059976-CDS-H-elongata_contig11961:5800..58371691679124.059976-CDS-H-elongata_contig11961:5800..5837Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11961 5801..5837 +
1622929700.480454-CDS-H-elongata_contig11961:6341..64431622929700.480454-CDS-H-elongata_contig11961:6341..6443Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11961 6342..6443 +
1691679124.0710783-CDS-H-elongata_contig11961:6341..64431691679124.0710783-CDS-H-elongata_contig11961:6341..6443Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11961 6342..6443 +
1622929700.4940321-CDS-H-elongata_contig11961:6827..68991622929700.4940321-CDS-H-elongata_contig11961:6827..6899Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11961 6828..6899 +
1691679124.078491-CDS-H-elongata_contig11961:6827..68991691679124.078491-CDS-H-elongata_contig11961:6827..6899Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11961 6828..6899 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig11961.1512.1

>prot_H-elongata_contig11961.1512.1 ID=prot_H-elongata_contig11961.1512.1|Name=mRNA_H-elongata_contig11961.1512.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=135bp
GRRPSVAKKRINPLERTLAILVQSMRGNKVVVEMKNDVEISGLLEETDQN
MKWVLTALLTHAKKSLSMVDVRYTSAQGSVRKMDVALVQGKMIRYVHIPD
EVDAISNLQTYMRAMEKSSASYRRNMIKPKTTPE*
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mRNA from alignment at H-elongata_contig11961:58..6899+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig11961.1512.1 ID=mRNA_H-elongata_contig11961.1512.1|Name=mRNA_H-elongata_contig11961.1512.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6842bp|location=Sequence derived from alignment at H-elongata_contig11961:58..6899+ (Himanthalia elongata Himel1 dioecious)
GGGAGGCGACCTTCAGTCGCTAAAAAACGAATAAACCCATTAGAGCGGAC
GCTAGCTATCCTAGTGCAGGTAAGAGCAACTGGCGACATTGGTCGTACTG
AACATGTTCGTTGTTTCTTTGGATCTCGTGTTACTAAGTACTATATTTAG
GAACGGTGAGTTCATCGTTCTATGCGTACATTTGGTAGCTGACGCTTCGT
GAGAGAGCAGGGCCTGGCTGCCAGTTCATTCTGTTCATTCTGTAGCGTGG
TTACCCCAGGAGGTAGGTGTGCTGCCTGTGGTATAAACTATAAACATACC
TGTATCAACTTCGGGAAAATGATCAATGCTTATTTTTTCCCAGTATTTTT
TGTGTTGGTTTTTACTTTTTACTGTCTGTTTTCGTTTTCCATCTCCAACA
TGACATAGCCTATACGAGGTACGACGTACCTGGTATATGTTTACAGCATA
CTACGACTGTCAGTATTTCTTTTTAGAAACCATAAACCGGATTGGCAACG
CTCTTTACTTTTCTTTTAAAGTATTTCAAACCCTCAAAACATCCACACCT
TCTTCGGACAATAAAACTGCTCCATGGGGTTAACTGAAAAAGGAACACCC
GTTACGCAAGCTACCTTGAGGACTACCAGCCCAGTGCCGGTTGACTTTCC
GTGGTGAACGTCATCGGTACCCAATTGCATGACCTGATGACTTCGGGATG
GCGGTTAACGGTATAGATGAACACCGTCGCGGAAAGCGGGAGGAACGAGA
TGATCCTGCGAGTAAGTACCAGATCGAGCTTGGGCAAGAAAGATGAGTAG
GCTGACGTGGGACGGAGTAGGCTGACGTGGGACGGGATAGCCGAACCCGT
CCCGCAAAACCAAATACTCAGGCGCGGACCGGTACAGGCCAATCCAACGT
CTTGAGAGATAGGTCCTCATAAGGGGGGGGGTATGCAAACCGGTATGGCA
CCCCCTTACGTGTAATGTCGGTCTGTGCGGTCTAATTCAGATGTACATAC
TCGAAACTGACGATAGTTGGTCATAGTCCCCTTAACTTAACTTAACCGTT
CCATTCTTGGTAATAGTAATGAAGTATATAGGATATAATGTAGATGTTCG
AAGGGTTTGATAGAGTTATATTATTTTCAGAAAAAATATATATTTATTTT
CCCTTTTTATCAAATTGCATTAGACCGCTGCAACCGGCATGGCACATAAG
GGGGCGCCACGCTGGTTTGTAAATATCTTCCCCCCTATGAGGAGTTATCC
CTGAAGACGTTGGATTGGTTTATCATATTCGCGTTGCGTACGTAACCACG
CCGGACTACCGCTGCAACTCTCCCTCCTGCCCCCGCTGTCCCACCTCTTG
GTGCAACACTCCGTGGTGTTGGCGTTTCGAATGCCGCCACAGCTCCACCC
ACCTCTATCCCCAGCTGGGTTGAGTCCTCCATCCGATTTCCGATCTGGCG
GATTCTCTTCGATTGCGGGACGGCCACCATCGCTACCGTCGTTACCAGCA
CCGCTACATTGGCCACTGTGACAGCGGGTACTCGCGCCTAGATGCCTCCC
GCCCTCTCCCTCGGCGCTACAGCGTCGACGACCGCCCCCCCCCCCATTCC
TACAACCTACGTCATCGCGATAGCGGCTTCCAGCGCCGGCATGGAGTTCA
CCGCGCCCGCGCCAGCCCCTGCATGTTCCATCGTCACTTTCACTGGTCGT
GTGGCTGCTGCCGGTGCGGTCGGTTCCTCGCTTTCGGTCAGTACCAGTGG
TGCGATACTCTCTTTAACTCCCTCCGTCGCCGCGGCAGCCGCCATTACAG
GCGACGCGGTACCCTTTTCGATTCCCCCTCCTCCCCCTCCACCGCCGTAG
CCGCTGTGGATGCCTCCGACACTACCTCTGCAATGGCGTGAAACCTTGTT
CCTTTGCTCATCGCTAAGGCAAGACGATCCCCTGGCGCCGTGGCTGGTCG
ACCAACGGCTCGAGCCATGGCCTCGCGGAAAGCGCCCGATAGTTGCCGAA
GTTTTGCCTTCTCTTGTCCCCGTGCGGCTGCTATTAATAGTTGATCGCCC
TCCAGATACCCTCCTTTGAGCACCCCGTGGGTCACGATGGTCTTGTAGAA
ACTGGTGGTGTCCTCCCCGACATCACCGCAGGTGGAGAACGTAATAGTCT
GAAGGGTATAGGTAGCAGGATTAAAGGATCCTCGATTCGTATCAATCTTG
CGCTTCTTCGCCAAGCGGATTCATTTTCGCTGATAGCTGACTACGAGCAG
GCTTAGCAAACATATCCAGTTGGTCCATACTAAAGGCTATACGGTATGTG
ATGACCGCATACACAAAGACCACATACACAAAGACCACATACACAAACCG
CCATTGGTGAAATACAGAGGATGGGGCCAACTATCGTCAGGTTCGAGTAA
TACTAATACAGTGCTATAAATAGGGCTGTGAGTCGACTCCGACTTTCATA
AGACTAGTCGACTAGTCGAAAAGTTAATTACTCGGCTGCGAAGCAGCCCG
ACTAAATGGCCGTTTTCTCCCGGGGTCTCGAGGATTGCAGAAACCTAAAC
CTATGTCCAAAACTGCACTAGTCCCCTCCCCCAAAAAGGTGGGGTGGGGT
GGAGTCGAGAGTATACCCCAATGTGCGCTCAATTGCACTCACCACGGGCG
CGTTTTCTCGGCTCTCATTGGCTGCTGCTGCTTTTTAAAACAGAATATCA
GGCTCGTGTACATCCTTGCTCTCAAGTGCAGAAACTCTTTACATTTTATA
TATCACTTTTTTTTTAATCAAGCGTATGGCAGCAGTACTGTACGAACGGA
ATTGCACGAAGATAAGACTGCATCATAACGGACACGATTGTCATTCATTT
TTTGTGTGAAGTTTGAATTACACATAAACGTACATGTGCGGTACAGACAG
CTGTATGGACATATATTACATACACGGTAGTCCGTATGTGCACCTGCCAG
GTGTATATTATTTCGTGCATCTGCCGTAAAGCCTTCAGAAAAATACATTA
GAAGCCTTTCGAGAGGGTTGGTTTCTTGTCCATGGGTGGGTGGTGCGGGT
TAGGGTGGCGGGTTGGGTCAGCCAGTATATAATGGTTTCAGAGAAACGGC
TATTTTACTTTGCATGAAATCAATGTTTTTTGCAACTTTCTCCCGTAGTC
ATAAACTAAATGGAGGCTTTACGGCAGGTGCACGGAATAATATGCACCTG
GCATGTGCACATAGGGGCTACCTATGTACACATATCAACAGTTGATCGCA
CCAACAAGATAGACGACCGCATCTGGTCTAGCAATGTACTGACGAAATGT
ATTAACAGTTTATAGGGCGCAGAAGAATGAAAAGCGAAAAGCTTTAAGAA
CCTCTTGGTTCTTCAAAGCATTGAAGCATTCTTACCGGGCCATGCATGTA
TGGAGGCATGTGTGTGGTTGGGGTGACGGACGGGAGTGTGCTTTTTTTAA
TCTTTTTTCATACAGGGGCCTATGTTTGTATGTTTGTGGGTGCAAAACTG
ACAGTCCCACAATCACGGGAATGTTACAGGAATGTTACAGGTCTTCAATA
CTGTGATATTTACATCCCCACTCTACTCTATAGGAGATAGTGAGCTTGTA
GGGGCAGTTCTATGCTTCAAATAAAATAATTAAAAGTACATTAAGGTTAG
TAGTCTATATATGGGGAATATATTTCGATTCACTTATTAATAGTGTACTG
CCCTACAGTATTAGACTTATGGCATGATTTGGGTCAGGGATCTAGGATTT
TTATGAGATTATATTTCCTTTCTTTTTCAGCATACAGAAAGTACGCGATA
TTTTTTTGGAATAAAGCCAATCTTGTCAAAATAACCATTTCTGTTAAGCA
GAAGGCATGAGTTTAAGCATAAGGAAATTGTTTTTTATCGATTGAGTGGA
CAATAAAGTGTCAGGGAAATTGTTTTTTATCGATGGAGAGGCCGTTAACG
TGTCAAGGACCAAGACCAACCAGTATTAAAGTATTAATAGTATGTCTCAC
GATATACATTTTCAATCAAAGGGAATTCAGCACTACGGATCGAACGGATC
GAACTGAGTAGTCCTCGTGGGATAGCGCCAGCCGCCTGCCAATTTTCATT
TTAAAATATGAACTAATTTTAACTTCGAACATCCATGCATTCTTAGCGCC
GGGAGAGGTGCAGTCCAGGGGACCAACTATCGTCAGGTTGGAGCTTGCAC
TTGACTACCTTTGAGCACAAAATCGTCAAACGTGATTAATCGTGTTCCCC
AATGGTAAACGTATCGGGTCAACAGCATGTTAATGTTGGGAAGAAGCCCA
CCGTTTTTAAAGCGTACAGTACAATTCGATTATTCATCATGTGGGTCGGT
TAAAACACACAAACACAAACACGTGCACCTCGAGGACCAAACTTTTTTCC
CCTCGAAACGCCTCCGTATACACTGCCAGCGTGAAAAATACCAAAAACTG
TTTATTTATAAAGCAGATATAAGGCTCCTAGCGAAATCAAATTATGACAC
GTTGTTATACCATCTTTCCGATGAAACTCTAGGGATAATTATAATACTCG
TTTCGAACATTTTTTTACGAAAATTGGTGAATCAGGCTTGCATTTTTTTT
CTGGATCTCGGTTGCGTTATTTTTTTTAATTTTAATTTTTCCTATGCACG
TCTTCTCTATGATGAAACCCACCAGGCACCCCACACGGTTCTCAATCGTC
CCTAGGATTTCGTCCACCGAGGACTGTCTCCCTCTCATGACTAAAGGCTT
CGTGCGAGCGCTCGGTCTGCGTGATTACGGTTCGCCGCCGCAGCAGCGTG
CAACCCATGCCGCCAAGCGCGGCTAGCATGTAGTTGATTGTGCTAGCATA
GAGCTATAATTTCGGGGGCCTCCCTTTACATATTGTTGTCCCACGAACTC
TTCCCAACACATTTAACCAGTAATAATTTTATTAAAACGATTTCAAACTT
TTTTGCGAACTTCTTCCAGCTTGCTGCGAACCCTGTTGCGTGCTGACGTC
ATCACCATGGTCATGGATAAATGATCGATATGCGCATCTTCCGAATCTTT
CGTTGAGACGTCGAGACGTCGGACGGGCTATACGGCTGGAAGCGGTATGG
ATGCTACCGGGATGTCATAGCTGTTTAGACGTGCCCAGTAACCAGATCAC
GTGGCGGTACCGGGTGGGCGTCGGGGACTTGGTAAATGACGCGACAGCCG
CCCGACGGAACCACATTAATTTATATAATAGTCGACATGCGACGAATATG
AAAAGAAGCACACCCGCCGTTCCTTCCGATCCGATTCCGTTACTCCCCCT
TACCAGAGCATGAGAGGCAACAAGGTGGTGGTCGAGATGAAGAATGACGT
CGAAATTTCCGGTCTGCTAGAAGAAACGGATCAAAACATGAAGTGGGTAC
TTACTGCACTGTTGACACATGCAAAAAAATCGTGACTAAATACAGCACAT
TGTTGCCTTGCCTTGCCTTGCCTTGCCGTGCCCTCTTACCTTCACCTTAC
ACACAACCACGATCGTGAAGCATCATTGTTGCCTTGTTCGTGTGGGATCA
CCTTTTTTTGCTATTAAAATCGGTACTATACTATACTGTACTGTTCCTAT
GAATGTTATAGTGCGATGCGAGGTGTTCCAGCTTTCGAGCGTGCACACGT
TAATCCAGTGTTAAGCATTCTTCCCTCCCGTCGAATGTTCTATTGAATGT
GCCATCCAATCGCTGGCGTCGTCAACCTCCATATTCCTTAAAGCTTGTCG
ATGGTGGACGTCCGTTACACCAGTGCTCAGGTGAGTATACCCGCTGCCGT
AGTGGCACATAGCTTGTCGATGTCATTGTCACTGCTAATCAACGTTCCAG
TATTTCCTTCTTCCATCCGGTTGTTAATTGGAGTAATGTACAGGAAATGA
GGTAATTGAGTATTGGGGAGGAAACGATTATGCTATAGGAAAGTAGTTTT
ATTTCTTTATTTGAGTACATAAGCAGCAGCATCGATATGCGTATTGCACC
AATAGTCAGAATCTGATGCACTCAAAAGTGCTTGTTCTATCAAGACTACG
AAGAGGCCAAAAGCTTCACTCGTGAAACACGCTTTCATCAATTTTGAACT
TTCGATCACCAATCCTCGGGTTACCAATGCCGAAGTTGCCGTCGGTGGCC
GTTTGTGGGGATAACTATTTCCCAATCTCTACCGTCGGTCTACCGTCGGT
GGCCGCGCGTTGTGGATGGTGGGTTTGTTGCCTATGCTGGCTTGTTGTTC
TCGTGTTTTGTTGTTTTGTTGTTTTGTTGTTCAGGGATCGGTGAGAAAGA
TGGATGTGGCCCTCGTGCAGGGTAAAATGATACGCTATGTGCACATTCCA
GACGAGGTTGACGCCATCAGCAACCTGCAAACCTATGTGAGGATTCGCCC
CTTGAGTTGAAGAAGATGCGTCGTCTGTCCACTGAACTGAAGTGAACTGA
AACTATTGCTACTGTTAACTGACCAAAAAGTCAAAAAGGGTTAACTGACA
AAAACAAATGAAAAAGTCAACTACTATAGCAAAAACAAATGTCCGAAAGG
TCAACCGACTGATTTCGGCAGTACCAGGGTACTGTACAAGCTTGTCATGA
TATCTCTGTTCACCCACTTGCACATAATTACCACGGCACAGCAACGGGCG
GTCTGATATGGTCGGGTTGACCTCGAGAGAGTGCAGGGTTCAAGTTCAAA
CCGTGGGGCTGAAAATGTTGCCCGCGCCCGATTTTGTGCGTCTGTCGTTT
TTTGTTATTATAACTAATAGATGCGCGCCATGGAGAAGAGTTCGGCGAGC
TACCGCCGGAATATGATCAAGCCAAAGACCACGCCTGAGTGA
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Coding sequence (CDS) from alignment at H-elongata_contig11961:58..6899+

>mRNA_H-elongata_contig11961.1512.1 ID=mRNA_H-elongata_contig11961.1512.1|Name=mRNA_H-elongata_contig11961.1512.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=810bp|location=Sequence derived from alignment at H-elongata_contig11961:58..6899+ (Himanthalia elongata Himel1 dioecious)
GGGAGGCGACCTTCAGTCGCTAAAAAACGAATAAACCCATTAGAGCGGAC
GCTAGCTATCCTAGTGCAGGGGAGGCGACCTTCAGTCGCTAAAAAACGAA
TAAACCCATTAGAGCGGACGCTAGCTATCCTAGTGCAGAGCATGAGAGGC
AACAAGGTGGTGGTCGAGATGAAGAATGACGTCGAAATTTCCGGTCTGCT
AGAAGAAACGGATCAAAACATGAAGTGGGTACTTACTGCACTGTTGACAC
ATGCAAAAAAATCAGCATGAGAGGCAACAAGGTGGTGGTCGAGATGAAGA
ATGACGTCGAAATTTCCGGTCTGCTAGAAGAAACGGATCAAAACATGAAG
TGGGTACTTACTGCACTGTTGACACATGCAAAAAAATCCTTGTCGATGGT
GGACGTCCGTTACACCAGTGCTCAGCTTGTCGATGGTGGACGTCCGTTAC
ACCAGTGCTCAGGGATCGGTGAGAAAGATGGATGTGGCCCTCGTGCAGGG
TAAAATGATACGCTATGTGCACATTCCAGACGAGGTTGACGCCATCAGCA
ACCTGCAAACCTATGGATCGGTGAGAAAGATGGATGTGGCCCTCGTGCAG
GGTAAAATGATACGCTATGTGCACATTCCAGACGAGGTTGACGCCATCAG
CAACCTGCAAACCTATATGCGCGCCATGGAGAAGAGTTCGGCGAGCTACC
GCCGGAATATGATCAAGCCAAAGACCACGCCTGAGTGAATGCGCGCCATG
GAGAAGAGTTCGGCGAGCTACCGCCGGAATATGATCAAGCCAAAGACCAC
GCCTGAGTGA
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