prot_H-elongata_contig74145.15107.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig74145.15107.1
Unique Nameprot_H-elongata_contig74145.15107.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length77
Homology
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BLAST of mRNA_H-elongata_contig74145.15107.1 vs. uniprot
Match: D8LE11_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE11_ECTSI)

HSP 1 Score: 111 bits (277), Expect = 9.250e-27
Identity = 60/90 (66.67%), Postives = 63/90 (70.00%), Query Frame = 0 
Query:   12 SAGAVCELREDVGSLEEVILTHNAFIRKVASEAGIR-------------------------RPAPPLPPPQADPLGHMNKDQLYRFRTMW 76
            SAGAVCELREDVGS+EEVILTHNAFIRKVASEAGIR                         RPAPPLPPPQADPLG+MNKDQL +FRT W
Sbjct:  465 SAGAVCELREDVGSVEEVILTHNAFIRKVASEAGIRLPAGEWAAFFGYDQPVSAELEAARSRPAPPLPPPQADPLGYMNKDQLNKFRTAW 554
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BLAST of mRNA_H-elongata_contig74145.15107.1 vs. uniprot
Match: A0A6H5L6J3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6J3_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 9.430e-12
Identity = 34/36 (94.44%), Postives = 36/36 (100.00%), Query Frame = 0 
Query:   12 SAGAVCELREDVGSLEEVILTHNAFIRKVASEAGIR 47
            SAGAVCELREDVGS+EEVILTHNAFIRKVA+EAGIR
Sbjct:  455 SAGAVCELREDVGSVEEVILTHNAFIRKVATEAGIR 490
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig74145.15107.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LE11_ECTSI9.250e-2766.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L6J3_9PHAE9.430e-1294.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig74145contigH-elongata_contig74145:767..2238 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig74145.15107.1mRNA_H-elongata_contig74145.15107.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig74145 767..2238 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig74145.15107.1 ID=prot_H-elongata_contig74145.15107.1|Name=mRNA_H-elongata_contig74145.15107.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=77bp
MVGACDDEESESAGAVCELREDVGSLEEVILTHNAFIRKVASEAGIRRPA
PPLPPPQADPLGHMNKDQLYRFRTMW*
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