mRNA_H-elongata_contig74081.15102.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig74081.15102.1 vs. uniprot
Match: D7FH04_ECTSI (UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase, family GT41 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH04_ECTSI) HSP 1 Score: 369 bits (948), Expect = 8.230e-117 Identity = 219/430 (50.93%), Postives = 255/430 (59.30%), Query Frame = 1
Query: 1 EHFLLQGRRHGKADDLESAVQAFEVAVDLEPRSAPARAELGRALVRSGRGSRGFDSLVAAFEIDSFCPGVKDGFREYYRAEIEENPGDIDLHEGLAALCVDSGLTEEAAACYRRCLELSSSS---------------------LGDSSWSAVSDTARIDRWSVALFKCHASVCCWDRWSAEAKALQEAVRRQRGSTSFTPPLRAEGGRIRDAPLWQDFDLLGNV----DENPSEHAPPIMSEPSTTGQGGETSTCGFTVGEDDDGALRPPLHPFDSLSAPLSIGDCLEVAWRQSQRVLGEGRAGTYWRHNR-----------------------------ASQSP--RDTKGRVRLGYLSGDLMGTHPLTHLMQSVFGMHNKSDFEVFLYALNPHDGSPQRRRMEHEVENFRDLSALTAPEAAAVISDDG 1122
E L GR+H +A DLESAV FE A PRSA + ELGRALVR GRG GF+ LVAAF IDS CPGVKDGFREYYRAEIE +P +IDLHEGLAALCVDSG EEAAA YRRCL L +++ L + + AR DRWSVALFKC+AS+C WD W+ EA L+ AVRR+ GGR+ + + D DL+ + +++ E P + G++ G G+ G RP LHPFDSLSAPLSIGDCL VA +Q+ VL E R G R S SP RD +GRVRLGY+SGDLMGTHPLTHLMQS FGMH++ FEVFLYALNP DGS RRRME EVENFRDLS +TA EAAA I+DDG
Sbjct: 65 ERLLALGRQHTQAGDLESAVYQFEQAASQAPRSAVCQTELGRALVRLGRGQEGFNCLVAAFGIDSLCPGVKDGFREYYRAEIEADPNNIDLHEGLAALCVDSGNPEEAAALYRRCLGLHAAASAEGGGRTPSFSSSDPSAAGHLSSKEATEAAAAARKDRWSVALFKCNASLCQWDDWNGEALTLRTAVRRREXXXXXXXXXGGVGGRL--SSVEDDGDLVHRLLLGYEDDDFERLVPRDKQQRQGNNVGDSDNGGVN-GDAGAGPSRPALHPFDSLSAPLSIGDCLAVAQQQTSGVLSEARGGNSGPRGRDEEKRILGEEGVGGVQGQSLRQFHSGFSSPSSSPLLRDERGRVRLGYVSGDLMGTHPLTHLMQSTFGMHDRDSFEVFLYALNPDDGSAPRRRMEREVENFRDLSMMTAGEAAAAIADDG 491
BLAST of mRNA_H-elongata_contig74081.15102.1 vs. uniprot
Match: A0A6H5K431_9PHAE (GT41 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K431_9PHAE) HSP 1 Score: 309 bits (792), Expect = 2.090e-94 Identity = 203/415 (48.92%), Postives = 237/415 (57.11%), Query Frame = 1
Query: 1 EHFLLQGRRHGKADDLESAVQAFEVAVDLEPRSAPARAELGRALVRSGRGSRGFDSLVAAFEIDSFCPGVKDGFREYYRAEIEENPGDIDLHEGLAALCVDSGLTEEAAACYRRCLELSSS----------SLGDSSWSAVSD-----------TARIDRWSVALFKCHASVCCWDRWSAEAKALQEAVRRQ----RGSTSFTPPLRAEGGRIRDAPLWQDFDLLGNV----DENPSEHAPPIMSEPSTTGQGGETSTCGFTVGEDDDGALRPPLHPFDSLSAPLSIGDCLEVAWRQSQRVLGEGRAGTYWRHNRASQSPRDTKGRVRLGYLSGDLMGTHPLTHLMQSVFGMHNKSD------------FEVFLYALNPHDGSPQRRRMEHEVENFRDLSALTAPEAAAVISDDG 1122
E L GR+ +A DLESAV FE A PRSA + ELGRALVR GRG GF+ LVAAF IDS CPGVKDGFREYYRAEIE +P ++DLHEGLAALCVDSG EEAAA YRR L L ++ S S+ SA D AR DRWSVALFKC+AS+C WD W+ EA AL+ AVRR+ RG T R EG R + + D DL+ + +++ E P + S G+++ G G G RP LHPFDSLSAPLSIGDCL VA +Q++ VL E R G RD R G G + G L L + F + S FEVFLYALNP DGS RRRME EVENFRDLS +TA EAAA I+DDG
Sbjct: 65 ERLLALGRQQTQAGDLESAVYQFERAASQAPRSAVCQTELGRALVRLGRGQEGFNCLVAAFGIDSLCPGVKDGFREYYRAEIEADPNNVDLHEGLAALCVDSGNPEEAAALYRRLLGLHATATAEGSGRIRSFSSSNPSAAGDLSSKETTEAAAAARKDRWSVALFKCNASLCQWDDWNGEALALRTAVRRRGWRRRGRT------RGEGSGGRLSSMEDDGDLVHRLLLGYEDDDFERFVPRDKQQSQGNNVGDSNNGGVDGGA-GAGPSRPALHPFDSLSAPLSIGDCLAVAQQQTRGVLAEARGGD------GGPRGRDEDERTSGGEGVGGVQG-QSLRRLFHAGFSSPSSSSSLRDERGRVRLGFEVFLYALNPDDGSAPRRRMEREVENFRDLSMMTAGEAAAAIADDG 465
BLAST of mRNA_H-elongata_contig74081.15102.1 vs. uniprot
Match: A0A835Z2W6_9STRA (Glycosyl transferase family 41-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2W6_9STRA) HSP 1 Score: 156 bits (395), Expect = 8.340e-39 Identity = 111/342 (32.46%), Postives = 150/342 (43.86%), Query Frame = 1
Query: 172 VAAFEIDSFCPGVKDGFREYYRAEIEENPGDIDLHEGLAALCVDSGLTEEAAACYRRCLELSSSSLGDSSWSAVSDTARIDRWSVALFKCHASVCCWDRWSAEAKALQEAVRRQRGSTSFTPPLRAEGGRIRDAPLWQDFDLLGNVDENPSEHAPPIMSEPSTTGQGGETSTCGFTVGEDDDGALRPPLHPFDSLSAPLSIGDCLEVAWRQ----SQRVLGEGRAGTYWRHNRASQS-----------------PRDTKGRVRLGYLSGDLMGTHPLTHLMQSVFGMHNKSDFEVFLYALNPHDGSPQRRRMEHEVEN----FRDLSALTAPEAAAVISDDG 1122
AAF +D+F PG+K GF EYY A I NP D+D EGLA L DSG +AA +RRC+++ ++ G + W W +L C A+VC W W +A L+ VRR G +RD + P +HPFD+LS PL+ D +A + S R+ E A P+ + R+R+ Y++GDLMGTHPLTHLMQSVFG+H+ + FEV +YAL DGS +R R+ ++E DLSAL A AAA + DG
Sbjct: 29 AAAFALDAFAPGIKKGFEEYYLASIAANPQDLDAVEGLAVLYQDSGNYTQAAELFRRCMDMQTAPGGRADW-----------WFASLLNCRAAVCDWRAWEEDAAQLRGLVRR---------------GDVRDGDM--------------------------------------------------PVIHPFDALSRPLTAADNRVIATQYARSVSARMAAEEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQPHQ-RIRIAYVTGDLMGTHPLTHLMQSVFGLHDAARFEVRVYALCADDGSRERARVRADIERGGGALVDLSALPARAAAAALRGDG 293
BLAST of mRNA_H-elongata_contig74081.15102.1 vs. uniprot
Match: A0A835ZDI7_9STRA (Protein O-GlcNAc transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDI7_9STRA) HSP 1 Score: 105 bits (261), Expect = 7.750e-21 Identity = 62/141 (43.97%), Postives = 84/141 (59.57%), Query Frame = 1
Query: 721 ALRPPLHPFDSLSAPLSIGDCLEVAWRQSQRVLGEGRAGTY--WRHNRASQSPRDTK-----GRVRLGYLSGDLMGTHPLTHLMQSVFGMHNKSDFEVFLYALNPHDGSPQRRRMEHEVENFRDLSALTAPEAAAVISDDG 1122
A P + PF +L PL + D LE++ R +QR R +RH + GR+R+GY+S DL G HPL+HLMQSVFGMH+KS F+V YAL+ +D S R+++E EVE RD+SAL +AA +I DG
Sbjct: 487 AALPSVQPFHALVYPLGLADMLEISRRYAQRARLNVRLLDLPPFRHRARAXXXXXXXXXXXXGRLRVGYVSSDL-GNHPLSHLMQSVFGMHDKSRFQVTCYALSANDNSVWRQKIEAEVEQMRDISALQPGDAARLIHADG 626
BLAST of mRNA_H-elongata_contig74081.15102.1 vs. uniprot
Match: K3X4T5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X4T5_GLOUD) HSP 1 Score: 103 bits (256), Expect = 1.620e-20 Identity = 63/152 (41.45%), Postives = 89/152 (58.55%), Query Frame = 1
Query: 682 STCGFTVGEDDDGALRPPLHPFDSLSAPLSIGDCLEVAWRQSQRV-----LGEGRAGTYWRHNRASQSPRDTKGRVRLGYLSGDLMGTHPLTHLMQSVFGMHNKSDFEVFLYALNPHDGSPQRRRMEHEVENFRDLSALTAPEAAAVISDDG 1122
S+C V + + P + PF +L PLS+ L+++ R ++R L E Y +S R + R+R+GY+S DL G HPL HLMQSVFGMH KS FEVF Y+ P DGS RR++ EVE+F+D+S ++ +AA +I DG
Sbjct: 31 SSCPLAVDK-----VLPSVQPFHALVYPLSMQRFLDISRRYAERAKLNVSLVEMPLLRY-------KSKRSNE-RLRIGYVSSDL-GNHPLAHLMQSVFGMHTKSKFEVFCYSTTPDDGSVWRRKIASEVEHFKDISMISNGDAARLIHSDG 168
BLAST of mRNA_H-elongata_contig74081.15102.1 vs. uniprot
Match: A0A5A8DUK4_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DUK4_CAFRO) HSP 1 Score: 103 bits (257), Expect = 2.830e-20 Identity = 59/132 (44.70%), Postives = 81/132 (61.36%), Query Frame = 1
Query: 718 GALRPPLHPFDSLSAPLSIGDCLEVAWRQSQRVLGEGRAGTYWRHNRASQSPRDTKGRVRLGYLSGDLMGTHPLTHLMQSVFGMHNKSDFEVFLYALNPHDGSPQRRRMEHEVENFRDLSALTAPEAAAVIS 1113
G L P + PF SL PL I + E+A + R RA + S +P + R+R+GY+S D G HPL+HLMQSVFGMH+KS FEVF +AL+P+DGS R ++E EVE+ DL+ L + A +I+
Sbjct: 557 GHLLPSVQPFHSLVYPLDIREMQELARCYAARATLTARAASLPCFAMPSLNPGE---RLRVGYVSSDF-GNHPLSHLMQSVFGMHDKSRFEVFCFALSPNDGSAWRAKIEREVEHVEDLTPLNFADCARLIN 684
BLAST of mRNA_H-elongata_contig74081.15102.1 vs. uniprot
Match: A0A7S1HPZ3_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis cordata TaxID=118079 RepID=A0A7S1HPZ3_9EUKA) HSP 1 Score: 99.4 bits (246), Expect = 3.410e-19 Identity = 56/133 (42.11%), Postives = 79/133 (59.40%), Query Frame = 1
Query: 730 PPLHPFDSLSAPLSIGDCLEV--AWRQSQRVLGEGRAGTYWRHNRASQSPRDTKGRVRLGYLSGDLMGTHPLTHLMQSVFGMHNKSDFEVFLYALNPHDGSPQRRRMEHEVENFRDLSALTAPEAAAVISDDG 1122
PP+ PF +++ P S L++ A+ ++ G RH RD R+RL Y+S D G HPL+HLM SVFGMH++S FEVF +AL+P D S RRR+ EVE+F D+S+ +A + A IS +G
Sbjct: 42 PPVQPFHAMAYPFSEDLALKISKAYANHCEIVSRGFNLGELRHPERRPLARDQGERLRLAYVSSDF-GNHPLSHLMASVFGMHDRSRFEVFCFALSPDDRSEWRRRISQEVEHFVDVSSWSAADIARRISAEG 173
BLAST of mRNA_H-elongata_contig74081.15102.1 vs. uniprot
Match: A0A7S3DZJ3_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S3DZJ3_9CHLO) HSP 1 Score: 99.4 bits (246), Expect = 3.580e-19 Identity = 56/133 (42.11%), Postives = 79/133 (59.40%), Query Frame = 1
Query: 730 PPLHPFDSLSAPLSIGDCLEV--AWRQSQRVLGEGRAGTYWRHNRASQSPRDTKGRVRLGYLSGDLMGTHPLTHLMQSVFGMHNKSDFEVFLYALNPHDGSPQRRRMEHEVENFRDLSALTAPEAAAVISDDG 1122
PP+ PF +++ P S L++ A+ ++ G RH RD R+RL Y+S D G HPL+HLM SVFGMH++S FEVF +AL+P D S RRR+ EVE+F D+S+ +A + A IS +G
Sbjct: 307 PPVQPFHAMAYPFSEDLALKISKAYANHCEIVSRGFNLGELRHPERRPLARDQGERLRLAYVSSDF-GNHPLSHLMASVFGMHDRSRFEVFCFALSPDDRSEWRRRISQEVEHFVDVSSWSAADIARRISAEG 438
BLAST of mRNA_H-elongata_contig74081.15102.1 vs. uniprot
Match: A0A484DUK5_BRELC (Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DUK5_BRELC) HSP 1 Score: 99.4 bits (246), Expect = 6.580e-19 Identity = 56/134 (41.79%), Postives = 80/134 (59.70%), Query Frame = 1
Query: 724 LRPPLHPFDSLSAPLSIGDCLEVAWRQSQRV-LGEGRAGTYWRHNRASQSPRDTKGRVRLGYLSGDLMGTHPLTHLMQSVFGMHNKSDFEVFLYALNPHDGSPQRRRMEHEVENFRDLSALTAPEAAAVISDDG 1122
+ P + PF +L PLS+ L+++ R ++R L + Q+ R+R+GY+S DL G HPL HLMQSVFGMH+K+ F+VF YA +P DGS R+++ VENF D+ AL+ +AA I DG
Sbjct: 513 VLPAVQPFHALVYPLSMQRFLDISRRYAERAKLNVSLVELPPMRFQTKQASE----RIRIGYVSSDL-GNHPLAHLMQSVFGMHDKTKFQVFCYATSPDDGSSWRKQISESVENFVDICALSNGDAARTIHADG 641
BLAST of mRNA_H-elongata_contig74081.15102.1 vs. uniprot
Match: F0WMK0_9STRA (Protein O-GlcNAc transferase n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WMK0_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 6.600e-19 Identity = 55/133 (41.35%), Postives = 79/133 (59.40%), Query Frame = 1
Query: 724 LRPPLHPFDSLSAPLSIGDCLEVAWRQSQRVLGEGRAGTYWRHNRASQSPRDTKGRVRLGYLSGDLMGTHPLTHLMQSVFGMHNKSDFEVFLYALNPHDGSPQRRRMEHEVENFRDLSALTAPEAAAVISDDG 1122
+ P + PF +L PLS+ LE+A R + R + + H + P + R+R+GY+S DL G HPL HLMQSVFGMH +S F++F Y+ P+D S R+++ E E+F DLS ++ EAA I DG
Sbjct: 519 VLPSVQPFHALVYPLSMHCFLEIAKRYASRAKMNVQLVDFKVHQSPLKLPNE---RIRIGYVSSDL-GNHPLAHLMQSVFGMHRRSHFDIFCYSTTPNDHSCWRKKIASEAEHFIDLSQVSNGEAAERILRDG 647 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig74081.15102.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig74081.15102.1 >prot_H-elongata_contig74081.15102.1 ID=prot_H-elongata_contig74081.15102.1|Name=mRNA_H-elongata_contig74081.15102.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=375bp EHFLLQGRRHGKADDLESAVQAFEVAVDLEPRSAPARAELGRALVRSGRGback to top mRNA from alignment at H-elongata_contig74081:178..2594- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig74081.15102.1 ID=mRNA_H-elongata_contig74081.15102.1|Name=mRNA_H-elongata_contig74081.15102.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2417bp|location=Sequence derived from alignment at H-elongata_contig74081:178..2594- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig74081:178..2594- >mRNA_H-elongata_contig74081.15102.1 ID=mRNA_H-elongata_contig74081.15102.1|Name=mRNA_H-elongata_contig74081.15102.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2250bp|location=Sequence derived from alignment at H-elongata_contig74081:178..2594- (Himanthalia elongata Himel1 dioecious)back to top |