mRNA_H-elongata_contig7408.15101.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig7408.15101.1 vs. uniprot
Match: D7FVB5_ECTSI (Protein phosphatase type 2A regulator/ signal transducer n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVB5_ECTSI) HSP 1 Score: 484 bits (1247), Expect = 9.130e-159 Identity = 319/716 (44.55%), Postives = 415/716 (57.96%), Query Frame = 1
Query: 25 DSKAVEEAVTNPSNWLLRNRHTGQEVEAQTFVRSVVHHTARRP-PQ--PVGPLLGWMARRNRNTGNV----AVGRLRPTLLPPSNDAITSDDHTHGAPLSPP----------GRPHTSRAISKSPACVRGKSSLLPY---PSNARSNGSIARSNSGASSTLVGASTVDGFRLSNINSTQILPRLHPGGIRAISFSPSGEFLATAGADHRCFIFRVCGHLGGGRTVLEGENTNGEATVAAEGAELPARERDGTSV---GHLVEDHPIRVLQGHVGEIVCLSWSPDDLALLTASADGTVRCWHPQDGDNCMRAFEHGGRVTAVAWDPSSTLNATSGEEDAGEEGTGRRFLTGCMDAKLRLFSVDDPEPEESVLADKPVTAVSFAPDGKTLVAGFVGGGVGFHRTEGLVQFATTECRRHGIRHSAAQHALQVASPVRRLSSSAGGPAAAGRARSR-----------------ERGRRGTMGVSVGRGTSGGAEERVTGLCFRPQRKRSSELANGWNFKPERDDDHSRSGSVDALCGQIGHDSTE-ARAPRAGANGGRPAA-VAEAEGNGGEPHPRAGPTVDVLVSTNNSRTRVLVAEDGGAVTVAAKLKGHNTDGVLGRHAVAHFSEDGELVISGSTDGSVHVWPTPDAEASAKT---SSRRGPARLGWGEGHERAQICEKSVAVPVALFAPDAVARSIGGESSRIIVTGDDNGSLKVF 2037
D+ AV EAV++PS WLL+N+ TGQEVEA F +++ ARRP PQ V P LG + +R + A RPTLLPPSN + PL+PP GR R ++SP V G+S P S+ RSN S+S SS ++ F+L N+++TQ+LPRLHPGG+RA+SFSPSG FLAT G D RC +FRV +T+ GE + A VA R +SV G LV+D P+RVL GHV +V L+W+ D ALLT S+DGTVRCWHP +G+ C +EHGG VT+VAW+P G E G RFLTGCMDA++RLFS+D PE E+SVL+++ VTAV+F P G++ AG + G V F+R E + T ECRRHG RHSAAQ SPVRRLS G + G R T+G G G EERVTGLCFRP K +ELA + ++H SG+ + G++G +S E A +PRAG P A +A G+G R D+LVSTN++R+R+LV+ + G VTV KLKGH+T+G LGRH A +S+DG L++SG+TDGSVHVWPTP K+ SS R EGHERA++C+K V VPVA FAP +VA+++GG SSR+IVTGD+ G+ K+F
Sbjct: 58 DTLAVYEAVSDPSKWLLKNKETGQEVEATAFADTLL---ARRPAPQWATVSPRLGSHSHGSRGWPRLQRHKAPAFQRPTLLPPSNGDVAYFPLAPAGPLTPPSLQLGFSSLSGRASPLRFGARSP--VSGQSFSRPRCGSNSHGRSN-----SDSTTSSVILSVDAPPTFKLRNMSTTQLLPRLHPGGVRAMSFSPSGAFLATCGMDRRCCVFRVQKRR---QTLALGEGSPNAAAVAVGLPVDRGMSRQPSSVCVEGRLVDDQPLRVLTGHVDSVVALAWAGGDNALLTGSSDGTVRCWHPLEGNECSEVYEHGGGVTSVAWEP-------------GGEAHGGRFLTGCMDARIRLFSLDSPEVEQSVLSERAVTAVAFCPGGQSFAAGGIAGNVEFYRMENMSLELTVECRRHGFRHSAAQRTRLATSPVRRLSVGTGDGRSNGAGGDRVXXXXXXXXXXXXXXXXXXXXXNTLGSRAGARVPGTVEERVTGLCFRPPTKGPAELAG--DCSDSDGEEHRLSGASRSTGGKMGENSQEVAPSPRAGGEVVAPQADEKDANGSGNLWVERL--EADLLVSTNDNRSRILVSGERG-VTVGFKLKGHSTEGELGRHTAARYSDDGNLIVSGATDGSVHVWPTPTTPPGTKSVTWSSGR--------EGHERARVCDKRVGVPVAFFAPASVAKNLGGTSSRVIVTGDNEGNCKIF 734
BLAST of mRNA_H-elongata_contig7408.15101.1 vs. uniprot
Match: A0A196S6S1_BLAHN (Uncharacterized protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196S6S1_BLAHN) HSP 1 Score: 100 bits (249), Expect = 7.680e-19 Identity = 82/238 (34.45%), Postives = 111/238 (46.64%), Query Frame = 1
Query: 511 RLHPGGIRAISFSPSGEFLATAGADHRCFIFRVCGHLGGGRTVLEGE-NTNGEATVAAEGAELPARERDGTSVGHLVEDHPIRVLQGHVGEIVCLSWSPDDLALLTASADGTVRCWHPQDGDNCMRAFEHGGRVTAVAWDPSSTLNATSGEEDAGEEGTGRRFLTGCMDAKLRLFSVDDPEPEESVL----ADKPVTAVSFAPDGKTLVAGFVGGGVGFHRTEGLVQFATTECR-RHG 1206
R H I + FS ++LAT G D I++V R V + E N + + ED P+R GH IV +WS + LL+AS D TVR WHP D DNC+ F+H VT+V + P EE+A F++GCMD KLR++S+ P+ VL A +T V+F P G+ AG G V F+ ++GL F ECR RHG
Sbjct: 64 RHHQNAIWTMKFSCDRKYLATGGEDGVVNIWKV-------RKVTKEEWKENMDVRI--------------------FEDQPVRSYTGHTSHIVDFAWSKNGF-LLSASLDCTVRLWHP-DYDNCLCIFKHKDMVTSVDFYP---------EEEA-------YFISGCMDRKLRVWSI----PQGCVLKWTQAPSVITTVTFCPGGRLCAAGLSDGQVIFYYSDGLRYFTQMECRNRHG 252
BLAST of mRNA_H-elongata_contig7408.15101.1 vs. uniprot
Match: A0A6A6NN93_9PEZI (WD40-repeat-containing domain protein n=1 Tax=Lineolata rhizophorae TaxID=578093 RepID=A0A6A6NN93_9PEZI) HSP 1 Score: 97.4 bits (241), Expect = 3.580e-17 Identity = 84/262 (32.06%), Postives = 121/262 (46.18%), Query Frame = 1
Query: 397 RSNGSIARSNSGASSTLVGASTVDGFRLSNINSTQILPRLHPGG----IRAISFSPSGEFLATAGADHRCFIFRVCGHLGGGRTVLEGENTNGEATVAAEGAELPARERDGTSVGHLVEDHPIRVLQGHVGEIVCLSWSPDDLALLTASADGTVRCWHPQDGDNCMRAFEHGGRVTAVAWDPSSTLNATSGEEDAGEEGTGRRFLTGCMDAKLRLFSVDDPEPEESVLADKPVTAVSFAPDGKTLVAGFVGGGVGFHRTEGL 1170
R +GS++ S +T +STV+ S ST P L+ G I A+ FS G++LA G D + RV + + E T +EG L + + + RV +GH G+I+ LSWS ++ LL++S D TVR WH + C+ F+H V ++ + P R FL G D KLRL+S+ D + +TAVSF PDGKT +AG +GG F+ TEGL
Sbjct: 172 RGSGSVSARTSVGGTTSKRSSTVEVGAPSVTGSTMPSPGLYRTGGSDQIWAMEFSKDGKYLAAGGQDK---LVRVWAVISSPQERRAHEKAEEAETGLSEGRGLRLK-------APVFQKKTFRVYEGHEGKILDLSWSKNNF-LLSSSLDKTVRLWHVSRPE-CLCTFKHSEFVPSIQFHPRDD----------------RFFLAGSFDYKLRLWSIPDKSVAFWNQLPESITAVSFTPDGKTAIAGTMGGLCMFYDTEGL 405
BLAST of mRNA_H-elongata_contig7408.15101.1 vs. uniprot
Match: A0A6A6ZYD9_9PLEO (WD40 repeat-like protein n=1 Tax=Ophiobolus disseminans TaxID=1469910 RepID=A0A6A6ZYD9_9PLEO) HSP 1 Score: 87.8 bits (216), Expect = 3.440e-14 Identity = 69/214 (32.24%), Postives = 99/214 (46.26%), Query Frame = 1
Query: 529 IRAISFSPSGEFLATAGADHRCFIFRVCGHLGGGRTVLEGENTNGEATVAAEGAELPARERDGTSVGHLVEDHPIRVLQGHVGEIVCLSWSPDDLALLTASADGTVRCWHPQDGDNCMRAFEHGGRVTAVAWDPSSTLNATSGEEDAGEEGTGRRFLTGCMDAKLRLFSVDDPEPEESVLADKPVTAVSFAPDGKTLVAGFVGGGVGFHRTEGL 1170
I A+ FS G +LA G D ++ V + E + +A V +E A+ + + R GH I+ LSWS ++ LL++S D TVR WH +N + F+H V ++ + P+ R FL G +DAKLRL+S+ D SV +TAVSF PDGKT +AG +GG F+ TE L
Sbjct: 238 IWAVEFSKDGRYLAAGGQDRVIRVWVVI-------SSAEDRRWHEQAEVDPTTSEGEAQYLSAP----VFQQKIFREYHGHGATILDLSWSKNNF-LLSSSMDKTVRLWHASRDEN-LCIFKHSDFVPSIQFHPTDD----------------RFFLAGSLDAKLRLWSIPDKNVAFSVTVPDMITAVSFTPDGKTCIAGTLGGLCMFYDTEKL 422
BLAST of mRNA_H-elongata_contig7408.15101.1 vs. uniprot
Match: A0A072P677_9EURO (Uncharacterized protein n=1 Tax=Exophiala aquamarina CBS 119918 TaxID=1182545 RepID=A0A072P677_9EURO) HSP 1 Score: 84.7 bits (208), Expect = 2.940e-13 Identity = 69/214 (32.24%), Postives = 97/214 (45.33%), Query Frame = 1
Query: 529 IRAISFSPSGEFLATAGADHRCFIFRVCGHLGGGRTVLEGENTNGEATVAAEGAELPARERDGTSVGHLVEDHPIRVLQGHVGEIVCLSWSPDDLALLTASADGTVRCWHPQDGDNCMRAFEHGGRVTAVAWDPSSTLNATSGEEDAGEEGTGRRFLTGCMDAKLRLFSVDDPEPEESVLADKPVTAVSFAPDGKTLVAGFVGGGVGFHRTEGL 1170
I A+ FS G +LA AG D + ++ V + E E A E +L A + + R GH I+ LSWS ++ LL++S D TVR H + C+ AF+H VT++ + P R FL G +D+KLRL+S+ D VTAV+F PDGKT +AG +GG + TEGL
Sbjct: 109 IWAMEFSKDGRYLAAAGQDKKLRVWEVLATT----EDRDVEERLFETNNAGESVKLNAP---------VFKTKLFREYDGHTASILDLSWSKNNF-LLSSSMDKTVRLHHVSRAE-CLCAFKHVDFVTSIQFHPRDD----------------RFFLAGSLDSKLRLWSIPDKTVAYWAQVPDMVTAVAFTPDGKTAIAGCLGGLCILYDTEGL 291
BLAST of mRNA_H-elongata_contig7408.15101.1 vs. uniprot
Match: A0A5J5A0P4_9ASTE (Uncharacterized protein n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J5A0P4_9ASTE) HSP 1 Score: 84.7 bits (208), Expect = 3.120e-13 Identity = 67/243 (27.57%), Postives = 106/243 (43.62%), Query Frame = 1
Query: 517 HPGGIRAISFSPSGEFLATAGADHRCFIFRVCGHLGGGRTVLE-GENTNGEATVAAEGAELPAR-------------------ERDGTSVGHLV--------EDHPIRVLQGHVGEIVCLSWSPDDLALLTASADGTVRCWHPQDGDNCMRAFEHGGRVTAVAWDPSSTLNATSGEEDAGEEGTGRRFLTGCMDAKLRLFSVDDPEPEESVLADKPVTAVSFAPDGKTLVAGFVGGGVGFHRT 1161
H G I I FS G++LATAG D +++V G +++ E+ N + A G+ P R SV H+V + PI QGH+ +++ LSWS LL++S D TVR WH +C++ F H VT + ++P R F++G +DAK+R++S+ D + + + VTA + PDG+ + G G + T
Sbjct: 443 HSGSIWTIKFSLDGKYLATAGEDCVIQVWQVVESERKGDLLMDKSEDGNLNLLILANGSPEPTSMSPNLDSHLEKKRKGRSSISRKSVSVDHVVVPETVFALSEKPICSFQGHLDDVLDLSWSKSQ-QLLSSSMDKTVRLWH-LSSKSCLKIFSHSDYVTCIQFNPVDD----------------RYFISGSLDAKVRIWSIPDRQVVDWNDLHEMVTAACYTPDGQGALVGSYKGSCRLYNT 667
BLAST of mRNA_H-elongata_contig7408.15101.1 vs. uniprot
Match: A0A1D6IU83_MAIZE (Transducin/WD40 repeat-like superfamily protein n=4 Tax=Zea mays TaxID=4577 RepID=A0A1D6IU83_MAIZE) HSP 1 Score: 83.6 bits (205), Expect = 6.990e-13 Identity = 68/242 (28.10%), Postives = 107/242 (44.21%), Query Frame = 1
Query: 517 HPGGIRAISFSPSGEFLATAGADHRCFIFRV-------CGHLGGGRT------VLEGENTNGEATVAAEGAELPARERDGTSVG------HLV--------EDHPIRVLQGHVGEIVCLSWSPDDLALLTASADGTVRCWHPQDGDNCMRAFEHGGRVTAVAWDPSSTLNATSGEEDAGEEGTGRRFLTGCMDAKLRLFSVDDPEPEESVLADKPVTAVSFAPDGKTLVAGFVGGGVGFHRT 1161
H G I +I FS G LA+AG D +++V C G++ G +T A +P + G S G HLV + P VL+GH +++ L+WS D LL++S D TVR W + C++ F H VT + ++P R F++G +DAK+RL+S+ D + + ++ VTA S+ PDG+ + G G ++T
Sbjct: 415 HEGSIWSIKFSADGRRLASAGEDSVVRVWQVVETSAPPCSLAMDGKSGPLAPLPSPGAADGASSTTTPALASMPKKPAKGKSGGRDALPEHLVVPDKVFALAEQPACVLEGHQDDVLDLTWSKSD-QLLSSSMDKTVRLWDTES-QACLKTFAHSDYVTCIQFNPVDD----------------RYFISGSLDAKVRLWSIPDRQVVDWTDLNEMVTAASYTPDGQGAIIGSHKGSCRLYKT 638
BLAST of mRNA_H-elongata_contig7408.15101.1 vs. uniprot
Match: A0A6J1AN15_9ROSI (LOW QUALITY PROTEIN: WD repeat-containing protein 44 n=1 Tax=Herrania umbratica TaxID=108875 RepID=A0A6J1AN15_9ROSI) HSP 1 Score: 83.2 bits (204), Expect = 8.180e-13 Identity = 67/243 (27.57%), Postives = 111/243 (45.68%), Query Frame = 1
Query: 517 HPGGIRAISFSPSGEFLATAGADHRCFIFRVCGHLGGGRTVLEGE-----------NTNGEATVAAEGAEL-PARERDGTS--------VGHLV--------EDHPIRVLQGHVGEIVCLSWSPDDLALLTASADGTVRCWHPQDGDNCMRAFEHGGRVTAVAWDPSSTLNATSGEEDAGEEGTGRRFLTGCMDAKLRLFSVDDPEPEESVLADKPVTAVSFAPDGKTLVAGFVGGGVGFHRT 1161
H G I +I FS G++LA+AG D +++V G+ ++E N + E T+ + A+ P ++R G S + H+V D P+ QGH+ +++ LSWS LL++S D TVR W + C+R F H VT + ++P R F++G +DAK+R++S+ D + + + VTA + PDG+ + G G + T
Sbjct: 452 HNGSIWSIKFSLDGKYLASAGEDCVILVWKVVESERKGQLLMEKPEDGNLNFLLVANGSPEPTLLSPSADHHPEKKRRGRSSISRKSLSLDHIVVPETVFALSDKPVCSFQGHLDDVLDLSWSKSQ-QLLSSSMDKTVRLWD-LNSKTCLRIFSHSDYVTCIQFNPVDD----------------RYFISGSLDAKVRIWSIPDRQVVDWNDLHEMVTAACYTPDGQGALVGSYKGSCRLYNT 676
BLAST of mRNA_H-elongata_contig7408.15101.1 vs. uniprot
Match: A0A6G1GBV5_9PEZI (WD40 repeat-like protein (Fragment) n=1 Tax=Eremomyces bilateralis CBS 781.70 TaxID=1392243 RepID=A0A6G1GBV5_9PEZI) HSP 1 Score: 82.4 bits (202), Expect = 9.200e-13 Identity = 58/212 (27.36%), Postives = 93/212 (43.87%), Query Frame = 1
Query: 535 AISFSPSGEFLATAGADHRCFIFRVCGHLGGGRTVLEGENTNGEATVAAEGAELPARERDGTSVGHLVEDHPIRVLQGHVGEIVCLSWSPDDLALLTASADGTVRCWHPQDGDNCMRAFEHGGRVTAVAWDPSSTLNATSGEEDAGEEGTGRRFLTGCMDAKLRLFSVDDPEPEESVLADKPVTAVSFAPDGKTLVAGFVGGGVGFHRTEGL 1170
A+ FS G++LA AG D ++ V R + + G + P + P R+ +GH ++ LSWS ++ LL++S D TVR WH + C+ F+H V ++ + P R FL G +D K +S+ D + +TAV+F PDGK+ +AG +GG + F+ T+ L
Sbjct: 113 ALEFSKDGKYLAAAGHDKTVRVWAVISSPEERRDFEDAGSPQGGQGASPSPLRAP-----------VFHPTPFRLYEGHESTVIDLSWSKNNF-LLSSSFDKTVRLWHISRNE-CLCTFKHAEYVPSIQFHPRDD----------------RFFLAGSLDLKXXXWSIPDKSVAFWAQLPEMITAVAFTPDGKSCIAGTLGGQLHFYETDNL 295
BLAST of mRNA_H-elongata_contig7408.15101.1 vs. uniprot
Match: A0A1S3BUQ6_CUCME (WD repeat-containing protein 44 isoform X1 n=6 Tax=Cucurbitaceae TaxID=3650 RepID=A0A1S3BUQ6_CUCME) HSP 1 Score: 83.2 bits (204), Expect = 9.470e-13 Identity = 66/232 (28.45%), Postives = 102/232 (43.97%), Query Frame = 1
Query: 517 HPGGIRAISFSPSGEFLATAGADHRCFIFRVCGHLGGGRTVLEG-ENTNGEATVAAEGAELPAR-------------------ERDGTSVGHLV--------EDHPIRVLQGHVGEIVCLSWSPDDLALLTASADGTVRCWHPQDGDNCMRAFEHGGRVTAVAWDPSSTLNATSGEEDAGEEGTGRRFLTGCMDAKLRLFSVDDPEPEESVLADKPVTAVSFAPDGKTLVAG 1128
H G I I FS G++LA+AG D +++V G ++E E+ N AA + PA R S+ H++ + PI QGH+ ++ LSWS LL++S D TVR WH D C++ F H VT + ++P R F++G +DAK+R++S+ D + + + VTA + PDGK + G
Sbjct: 434 HSGSIWTIKFSLDGKYLASAGEDRIIHVWQVVESEKKGDLLMEKPEDGNLSFLFAANESPEPASLSPNVDNHHEKKRRGRSSISRKSVSLEHVIVPDTVFGLSEKPICSFQGHLDVVLDLSWSKSQ-HLLSSSMDKTVRLWH-LSRDTCLKIFSHSDYVTCIQFNPIDD----------------RYFISGSLDAKVRIWSIPDHQVVDWSDLHEMVTAACYTPDGKGALVG 647 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7408.15101.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig7408.15101.1 >prot_H-elongata_contig7408.15101.1 ID=prot_H-elongata_contig7408.15101.1|Name=mRNA_H-elongata_contig7408.15101.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=682bp MGTGGLRADSKAVEEAVTNPSNWLLRNRHTGQEVEAQTFVRSVVHHTARRback to top mRNA from alignment at H-elongata_contig7408:7793..9871- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig7408.15101.1 ID=mRNA_H-elongata_contig7408.15101.1|Name=mRNA_H-elongata_contig7408.15101.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2079bp|location=Sequence derived from alignment at H-elongata_contig7408:7793..9871- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig7408:7793..9871- >mRNA_H-elongata_contig7408.15101.1 ID=mRNA_H-elongata_contig7408.15101.1|Name=mRNA_H-elongata_contig7408.15101.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4092bp|location=Sequence derived from alignment at H-elongata_contig7408:7793..9871- (Himanthalia elongata Himel1 dioecious)back to top |