prot_H-elongata_contig74065.15098.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig74065.15098.1
Unique Nameprot_H-elongata_contig74065.15098.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length92
Homology
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BLAST of mRNA_H-elongata_contig74065.15098.1 vs. uniprot
Match: D8LGE3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGE3_ECTSI)

HSP 1 Score: 97.8 bits (242), Expect = 5.370e-22
Identity = 56/82 (68.29%), Postives = 69/82 (84.15%), Query Frame = 0 
Query:    7 CRRGVMAALSSQLDEVVDGLTDRQASTPRLRFADTAARWLMSASESAFEAAVETASVLLVTNLTQDSSDPLLQLNALELLEQ 88
            CRR VM AL+SQ+ EVV GLT RQA+TP+LRFAD A R LMSAS+SAF AAV+  ++ LVT+LT+D+SD LLQLNAL+LL+Q
Sbjct:  224 CRRAVMGALASQIGEVVAGLTARQAATPKLRFADIATR-LMSASDSAFAAAVDAGALSLVTDLTEDASDVLLQLNALDLLDQ 304
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BLAST of mRNA_H-elongata_contig74065.15098.1 vs. uniprot
Match: A0A6H5KYX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYX7_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 2.180e-21
Identity = 54/82 (65.85%), Postives = 70/82 (85.37%), Query Frame = 0 
Query:    7 CRRGVMAALSSQLDEVVDGLTDRQASTPRLRFADTAARWLMSASESAFEAAVETASVLLVTNLTQDSSDPLLQLNALELLEQ 88
            CRR VM AL+SQ+ EV+ GLT RQA+TP+LRFAD A R LMSAS+SAF AAV++ ++ LVT+LT+D+SD LLQLNAL+LL++
Sbjct:  141 CRRAVMGALASQIGEVIAGLTARQAATPKLRFADIATR-LMSASDSAFAAAVDSGALALVTDLTEDASDVLLQLNALDLLDR 221
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig74065.15098.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LGE3_ECTSI5.370e-2268.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KYX7_9PHAE2.180e-2165.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig74065contigH-elongata_contig74065:1152..2667 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig74065.15098.1mRNA_H-elongata_contig74065.15098.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig74065 254..2841 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig74065.15098.1 ID=prot_H-elongata_contig74065.15098.1|Name=mRNA_H-elongata_contig74065.15098.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=92bp
MAIEAACRRGVMAALSSQLDEVVDGLTDRQASTPRLRFADTAARWLMSAS
ESAFEAAVETASVLLVTNLTQDSSDPLLQLNALELLEQARH*
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