prot_H-elongata_contig74060.15096.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig74060.15096.1
Unique Nameprot_H-elongata_contig74060.15096.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length80
Homology
BLAST of mRNA_H-elongata_contig74060.15096.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 1.580e-44
Identity = 71/80 (88.75%), Postives = 74/80 (92.50%), Query Frame = 0
Query:    1 MYELDKDGTKVYIDPLDWWWVRCTDFPHLASLARRVLAIPATQAESERLFSCTGNIVAKNRNNLAPTTVELLVLLRHSWK 80
            MYE DK+G KVY+DPLDWW VRC DFPHLA+LARRVLAIPATQAESERLFSC GNIV KNRNNLAPTTVELLVLLRHSWK
Sbjct:  209 MYEEDKEGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWK 288          
BLAST of mRNA_H-elongata_contig74060.15096.1 vs. uniprot
Match: A0A6H5JPB0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPB0_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 2.090e-28
Identity = 53/57 (92.98%), Postives = 55/57 (96.49%), Query Frame = 0
Query:   24 TDFPHLASLARRVLAIPATQAESERLFSCTGNIVAKNRNNLAPTTVELLVLLRHSWK 80
            TDFPHLA+LARRVLAIPATQA+SERLFSC GNIV KNRNNLAPTTVELLVLLRHSWK
Sbjct:  152 TDFPHLANLARRVLAIPATQAKSERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWK 208          
BLAST of mRNA_H-elongata_contig74060.15096.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 6.150e-15
Identity = 37/74 (50.00%), Postives = 51/74 (68.92%), Query Frame = 0
Query:    5 DKDGTKVYIDPLDWWWVRCTDFPHLASLARRVLAIPATQAESERLFSCTGNIVAKNRNNLAPTTVELLVLLRHS 78
            ++ G +V   PL+WW V+  ++P LASLARRVL IPA QA+SER+FS  G +V K R  + P  V L+V LR++
Sbjct:  470 EEKGQEVRGKPLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARMDPENVGLMVFLRNT 543          
BLAST of mRNA_H-elongata_contig74060.15096.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 74.7 bits (182), Expect = 7.300e-14
Identity = 39/82 (47.56%), Postives = 55/82 (67.07%), Query Frame = 0
Query:    1 MYELDKDGT---KVYIDPLDWWWVRCTDFPHLASLARRVLAIPATQAESERLFSCTGNIVAKNRNNLAPTTVELLVLLRHSW 79
            ++++ K  T   KV+ +PLD W  +  ++P LA+LARRVLAIP++QA+SER+FS  G  V   R+ L    VELLV LR+ W
Sbjct:  466 VWDMQKTNTGDKKVFNNPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYLRNVW 547          
BLAST of mRNA_H-elongata_contig74060.15096.1 vs. uniprot
Match: UPI001C19DB61 (Hypothetical protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C19DB61)

HSP 1 Score: 70.9 bits (172), Expect = 5.990e-13
Identity = 32/65 (49.23%), Postives = 43/65 (66.15%), Query Frame = 0
Query:   15 PLDWWWVRCTDFPHLASLARRVLAIPATQAESERLFSCTGNIVAKNRNNLAPTTVELLVLLRHSW 79
            P  WW  + + FP L+ LA++ LAIPAT A SERLFS  GN++   R NL+PTT E L+  + +W
Sbjct:  178 PFKWWASQESQFPILSQLAKKYLAIPATSAASERLFSDAGNVMTVKRTNLSPTTFEHLIFCKRNW 242          
BLAST of mRNA_H-elongata_contig74060.15096.1 vs. uniprot
Match: UPI000CD602C4 (zinc finger BED domain-containing protein 4-like isoform X1 n=1 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=UPI000CD602C4)

HSP 1 Score: 70.5 bits (171), Expect = 7.970e-13
Identity = 34/72 (47.22%), Postives = 46/72 (63.89%), Query Frame = 0
Query:    4 LDKDGTKVYIDPLDWWWVRCTDFPHLASLARRVLAIPATQAESERLFSCTGNIVAKNRNNLAPTTVELLVLL 75
            L     +   DPL WW    T FP L+ LA++ L +PAT + SER+FSC+GNIV  +R +L P TV++LV L
Sbjct:  172 LQSPNVESDTDPLKWWKEHETLFPALSHLAKKYLLVPATSSPSERVFSCSGNIVTCHRASLKPETVDMLVFL 243          
BLAST of mRNA_H-elongata_contig74060.15096.1 vs. uniprot
Match: UPI001C164491 (Hypothetical protein n=2 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C164491)

HSP 1 Score: 70.1 bits (170), Expect = 1.320e-12
Identity = 32/65 (49.23%), Postives = 43/65 (66.15%), Query Frame = 0
Query:   15 PLDWWWVRCTDFPHLASLARRVLAIPATQAESERLFSCTGNIVAKNRNNLAPTTVELLVLLRHSW 79
            P  WW  + + FP L+ LA++ LAIPAT A SERLFS  GN++   R NL+PTT E L+  + +W
Sbjct:  189 PFKWWASQESRFPILSQLAKKYLAIPATSAASERLFSDAGNVMTVKRTNLSPTTFEHLIFCKRNW 253          
BLAST of mRNA_H-elongata_contig74060.15096.1 vs. uniprot
Match: A0A6I8U4U8_AEDAE (BED-type domain-containing protein n=1 Tax=Aedes aegypti TaxID=7159 RepID=A0A6I8U4U8_AEDAE)

HSP 1 Score: 70.1 bits (170), Expect = 3.120e-12
Identity = 33/69 (47.83%), Postives = 45/69 (65.22%), Query Frame = 0
Query:   11 VYIDPLDWWWVRCTDFPHLASLARRVLAIPATQAESERLFSCTGNIVAKNRNNLAPTTVELLVLLRHSW 79
            V +D L WW      FP LA  ARR+L IPAT A SER+FSC+GNI+   R+ LA   +E+LV ++ ++
Sbjct:  663 VEVDVLQWWKKNERVFPCLAKCARRILGIPATSAPSERVFSCSGNIMTSQRHQLASKNLEMLVYIKQNF 731          
BLAST of mRNA_H-elongata_contig74060.15096.1 vs. uniprot
Match: G3Q1U2_GASAC (Uncharacterized protein n=2 Tax=Gasterosteus aculeatus TaxID=69293 RepID=G3Q1U2_GASAC)

HSP 1 Score: 69.7 bits (169), Expect = 4.220e-12
Identity = 33/72 (45.83%), Postives = 45/72 (62.50%), Query Frame = 0
Query:    4 LDKDGTKVYIDPLDWWWVRCTDFPHLASLARRVLAIPATQAESERLFSCTGNIVAKNRNNLAPTTVELLVLL 75
            L     +   DPL WW +    FP L+ LA++ L +PAT + SER+FSC+GNIV  +R +L P TV+ LV L
Sbjct:  527 LQSASVESDTDPLKWWRIMKLSFPGLSRLAKKYLLVPATSSPSERVFSCSGNIVTCHRASLKPDTVDRLVFL 598          
BLAST of mRNA_H-elongata_contig74060.15096.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 5.740e-12
Identity = 31/43 (72.09%), Postives = 36/43 (83.72%), Query Frame = 0
Query:    7 DGTKVYIDPLDWWWVRCTDFPHLASLARRVLAIPATQAESERL 49
            DG KVY DPLDWW  R  +FPHLA+LARRVLAIP++QA SER+
Sbjct:  507 DGKKVYNDPLDWWRTRQMEFPHLAALARRVLAIPSSQAHSERV 549          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig74060.15096.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JWI1_9PHAE1.580e-4488.75Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JPB0_9PHAE2.090e-2892.98Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JHP9_9PHAE6.150e-1550.00Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 13... [more]
D8LCS5_ECTSI7.300e-1447.56Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
UPI001C19DB615.990e-1349.23Hypothetical protein n=1 Tax=Rhizophagus irregular... [more]
UPI000CD602C47.970e-1347.22zinc finger BED domain-containing protein 4-like i... [more]
UPI001C1644911.320e-1249.23Hypothetical protein n=2 Tax=Rhizophagus irregular... [more]
A0A6I8U4U8_AEDAE3.120e-1247.83BED-type domain-containing protein n=1 Tax=Aedes a... [more]
G3Q1U2_GASAC4.220e-1245.83Uncharacterized protein n=2 Tax=Gasterosteus acule... [more]
A0A6H5KUY5_9PHAE5.740e-1272.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008906HAT, C-terminal dimerisation domainPFAMPF05699Dimer_Tnp_hATcoord: 12..76
e-value: 3.3E-18
score: 65.3
NoneNo IPR availablePANTHERPTHR46169FAMILY NOT NAMEDcoord: 10..79
NoneNo IPR availablePANTHERPTHR46169:SF3coord: 10..79
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 12..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig74060contigH-elongata_contig74060:921..1160 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig74060.15096.1mRNA_H-elongata_contig74060.15096.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig74060 915..1160 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig74060.15096.1 ID=prot_H-elongata_contig74060.15096.1|Name=mRNA_H-elongata_contig74060.15096.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=80bp
MYELDKDGTKVYIDPLDWWWVRCTDFPHLASLARRVLAIPATQAESERLF
SCTGNIVAKNRNNLAPTTVELLVLLRHSWK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008906HATC_C_dom
IPR012337RNaseH-like_sf