prot_H-elongata_contig74053.15095.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig74053.15095.1
Unique Nameprot_H-elongata_contig74053.15095.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length184
Homology
BLAST of mRNA_H-elongata_contig74053.15095.1 vs. uniprot
Match: D7G4C8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4C8_ECTSI)

HSP 1 Score: 277 bits (708), Expect = 2.080e-87
Identity = 139/183 (75.96%), Postives = 157/183 (85.79%), Query Frame = 0
Query:    1 QALFILSLPLQVAFAFTIPDCAKPKFQKFYVMTFLMSLVWIGTLTHFMVEWANAVGCYAGVSPIFMGLVVLAVGTSVPDALGSMIAARGGEANMAIANAVGSNVFDVLIGLGFPWFLRGVIYSEAMDVDRDGIELNVIILFCTAILFVLVLALNKWSMNTKMGFFLFFLYLIYVTFVIVRELV 183
            Q LF+L LP+ VA + TIPDC KP+++++Y M+FLMSL WIG LTH+MVEW N +GC+  VSPIFMGLVVLA+GTSVPDA+GSMIAAR GEANMAIANAVGSNVFDVLIGLGFPWFLRG+I  E M VDRDGI LNVIILFCTAILFV VLA N WSMNTKMG FLF LY+ YV FV++RELV
Sbjct:  421 QVLFVLGLPMLVALSVTIPDCGKPRWEQWYAMSFLMSLAWIGLLTHYMVEWVNGLGCFLEVSPIFMGLVVLAIGTSVPDAMGSMIAARSGEANMAIANAVGSNVFDVLIGLGFPWFLRGIIKGEPMPVDRDGIALNVIILFCTAILFVSVLAGNDWSMNTKMGIFLFCLYVAYVIFVVIRELV 603          
BLAST of mRNA_H-elongata_contig74053.15095.1 vs. uniprot
Match: A0A7S2G6T6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G6T6_9STRA)

HSP 1 Score: 184 bits (468), Expect = 1.810e-52
Identity = 96/182 (52.75%), Postives = 128/182 (70.33%), Query Frame = 0
Query:    3 LFILSLPLQVAFAFTIPDCAKPKF----QKFYVMTFLMSLVWIGTLTHFMVEWANAVGCYAGVSPIFMGLVVLAVGTSVPDALGSMIAARGGEANMAIANAVGSNVFDVLIGLGFPWFLRGVIYSEAMDVDRDGIELNVIILFCTAILFVLVLALNKWSMNTKMGFFLFFLYLIYVTFVIVR 180
            L++LSLP  + FA T+PDC  P F    ++ Y ++FL  ++WIG L HFMVEWA+       V PI + LVVLA GTS+PDA+GSM+AA+ GEANMAI+NAVGSNVFD+L+GLG PW L G+   EAM V RDGI   V ILF T  LF+L+L + +W MN+ +G  +FFLY  +V + +++
Sbjct:  355 LYLLSLPFLIGFALTVPDCDHPTFTNCFKQIYWVSFLNCILWIGILCHFMVEWAHECAIILDVDPIVVALVVLATGTSIPDAIGSMVAAKNGEANMAISNAVGSNVFDILLGLGLPWVLSGLTKGEAMIVRRDGIIEYVGILFGTVFLFLLILIVFRWKMNSTVGGMMFFLYCAFVVYCLLK 536          
BLAST of mRNA_H-elongata_contig74053.15095.1 vs. uniprot
Match: A0A7S2H048_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H048_9STRA)

HSP 1 Score: 174 bits (442), Expect = 3.500e-49
Identity = 89/177 (50.28%), Postives = 122/177 (68.93%), Query Frame = 0
Query:    1 QALFILSLPLQVAFAFTIPDCAKPKFQKFYVMTFLMSLVWIGTLTHFMVEWANAVGCYAGVSPIFMGLVVLAVGTSVPDALGSMIAARGGEANMAIANAVGSNVFDVLIGLGFPWFLRGVIYSEAMDVDRD-GIELNVIILFCTAILFVLVLALNKWSMNTKMGFFLFFLYLIYVTF 176
            Q  +IL+LP  VAF  TIPDC+K   +K+YV TF++S++WI  L  FMV+ A AVGC   +SP+ MG+VVL+VGTS+PDALGS+  A+ GEA+MAI+NAVGSNVFD+L+GLG PW L  +   +++ +     + + + ILF T I F  VL  NKW MN ++G      Y +Y+TF
Sbjct:  280 QTYYILTLPAVVAFTLTIPDCSKTVCEKYYVPTFILSIIWIMILCMFMVQCAAAVGCLLDISPVIMGIVVLSVGTSIPDALGSVAVAKKGEADMAISNAVGSNVFDILLGLGVPWTLYTIFSGKSVTMSHQCSVAVPIAILFGTLIFFFGVLVANKWKMNNRLGVIFLAFYFVYLTF 456          
BLAST of mRNA_H-elongata_contig74053.15095.1 vs. uniprot
Match: D8LLM0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLM0_ECTSI)

HSP 1 Score: 175 bits (444), Expect = 7.500e-49
Identity = 89/201 (44.28%), Postives = 127/201 (63.18%), Query Frame = 0
Query:    3 LFILSLPLQVAFAFTIPDCAKPKFQKFYVMTFLMSLVWIGTLTHFMVEWANAVGCYAGVSPIFMGLVVLAVGTSVPDALGSMIAARGGEAN----------------------MAIANAVGSNVFDVLIGLGFPWFLRGVIYSEAMDVDRDGIELNVIILFCTAILFVLVLALNKWSMNTKMGFFLFFLYLIYVTFVIVRE 181
            LF+  LP  V  + T+PDC++P+++K+Y++TF+MS+ WI  ++ +MV  A    C  GVS I MG++VLAVGTSVPD +GSMIAA+ GEA+                      MAIANA+GSNVF++L+GLG PW    ++  E   VD +G    +IILFC  ++FV+ L L++W+MNTK+ + L F Y  YV + I  E
Sbjct:  352 LFVFGLPFLVGLSLTVPDCSRPEYEKYYILTFVMSISWISIISSYMVTLATGAACILGVSAIVMGVLVLAVGTSVPDMIGSMIAAKNGEASVGALPLLPTHEPTHPHIHGRGDMAIANAIGSNVFNILLGLGGPWLFSSLVSGEPTAVDSEGATTALIILFCAVLMFVVSLILSRWNMNTKLAYSLLFTYASYVVYTITAE 552          
BLAST of mRNA_H-elongata_contig74053.15095.1 vs. uniprot
Match: A0A7S1GDC6_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GDC6_9STRA)

HSP 1 Score: 159 bits (401), Expect = 8.240e-46
Identity = 78/177 (44.07%), Postives = 120/177 (67.80%), Query Frame = 0
Query:    7 SLPLQVAFAFTIPDCAKPKFQKFYVMTFLMSLVWIGTLTHFMVEWANAVGCYAGVSPIFMGLVVLAVGTSVPDALGSMIAARGGEANMAIANAVGSNVFDVLIGLGFPWFLRGVIY--SEAMDVDRDGIELNVIILFCTAILFVLVLALNKWSMNTKMGFFLFFLYLIYVTFVIVRE 181
            S P    F +TIPDC + K++K+Y + F MS++WIG L++F+V+ A  +GC+ G+ PI MGL VLA GTS+PDALGSM+ A+ G  NMA++NA+GSNVFD+ +G+G P+F+   I     A+ V    +   ++IL  T ++  + LA +KW ++ K+G+ LFF Y+ +V + I +E
Sbjct:   29 SAPWMFVFGYTIPDCNEEKWEKWYALAFTMSILWIGALSYFLVDMAVRLGCFFGLGPIVMGLTVLAAGTSIPDALGSMVVAQEGMGNMAVSNAIGSNVFDICLGIGLPYFVATAIVWPGTAIKVADSEVLEPILILLSTVLVVFVSLAASKWLLSNKVGYLLFFCYVAFVVYNIAKE 205          
BLAST of mRNA_H-elongata_contig74053.15095.1 vs. uniprot
Match: A0A662XPZ6_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XPZ6_9STRA)

HSP 1 Score: 164 bits (414), Expect = 2.300e-44
Identity = 79/181 (43.65%), Postives = 119/181 (65.75%), Query Frame = 0
Query:    4 FILSLPLQVAFAFTIPDCAKPKFQKF--YVMTFLMSLVWIGTLTHFMVEWANAVGCYAGVSPIFMGLVVLAVGTSVPDALGSMIAARGGEANMAIANAVGSNVFDVLIGLGFPWFLRGVIYSEAMDVDRDGIELNVIILFCTAILFVLVLALNKWSMNTKMGFFLFFLYLIYVTFVIVREL 182
            F+ + P+ V   FTIPDC  P F K   Y  TF++S++WIG L+HF V +    GC AG+    MGL ++A GTS+PDAL S++ AR G  +MA++NA+GSNVFD+L+GLG P+ L  ++YSE + V  D +++++ ILF   +L ++ L +++W +  + G FL  LY+ YV F  +R L
Sbjct:  396 FVFTWPIVVVARFTIPDCRYPAFSKGPGYAATFVLSIIWIGVLSHFTVSFGTKFGCIAGIPSALMGLTIIAAGTSIPDALSSILVARDGHGDMAVSNALGSNVFDILLGLGLPFLLSNLVYSETVPVSGDDLDISIAILFGVLLLVIVTLIISRWKLYPQAGAFLLLLYVAYVVFSYLRGL 576          
BLAST of mRNA_H-elongata_contig74053.15095.1 vs. uniprot
Match: A0A2R5G219_9STRA (Sodium/potassium/calcium exchanger 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G219_9STRA)

HSP 1 Score: 160 bits (406), Expect = 2.220e-43
Identity = 80/180 (44.44%), Postives = 118/180 (65.56%), Query Frame = 0
Query:    4 FILSLPLQVAFAFTIPDCAKP--KFQKFYVMTFLMSLVWIGTLTHFMVEWANAVGCYAGVSPIFMGLVVLAVGTSVPDALGSMIAARGGEANMAIANAVGSNVFDVLIGLGFPWFLRGVIYSEAMDVDRDGIELNVIILFCTAILFVLVLALNKWSMNTKMGFFLFFLYLIYVTFVIVRE 181
            F +S PL      TIPDC+    +F ++++ TF+MS+VWIG      V  A+ +GC  G++ I MGL++LA GTSVPD + SMI A+ G A+MAIANAVGSNVFD+L+GLG PW    VI    + VDR  +++++++L  T IL++  L LN+W+M  ++G    F+Y  Y+ + I+ E
Sbjct:  367 FFISFPLVALLHSTIPDCSNEDGRFHRWFISTFVMSIVWIGAACQLAVILASEIGCILGINAIIMGLILLAAGTSVPDMIASMIVAKQGHADMAIANAVGSNVFDILLGLGLPWAFAEVIRGNPVIVDRGNLKIDIVVLVITVILYISTLILNRWTMEKRIGVVFVFIYFGYIIYAILVE 546          
BLAST of mRNA_H-elongata_contig74053.15095.1 vs. uniprot
Match: A0A7S0LBD8_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LBD8_9EUKA)

HSP 1 Score: 153 bits (387), Expect = 2.300e-43
Identity = 73/176 (41.48%), Postives = 117/176 (66.48%), Query Frame = 0
Query:    6 LSLPLQVAFAFTIPDCAKPKFQKFYVMTFLMSLVWIGTLTHFMVEWANAVGCYAGVSPIFMGLVVLAVGTSVPDALGSMIAARGGEANMAIANAVGSNVFDVLIGLGFPWFLRGVIYSEAMDVDRDGIELNVIILFCTAILFVLVLALNKWSMNTKMGFFLFFLYLIYVTFVIVRE 181
            ++ PL + F  +IP+CA+P+ +  Y++TF MS+ WIG L++FM  WA+ +GC  G+ P  MG+ VLA GTSVPDA+GS++ AR G+ +MA++NA+GSNVFD+L+GLG PW L  +   + + VD DG+    ++L  T +L      L+ + +   +G F F LY ++V + ++ +
Sbjct:   60 IARPLFLLFEISIPNCAEPRNKNRYLVTFFMSIFWIGVLSYFMTTWASKLGCLWGIHPAVMGVTVLAAGTSVPDAIGSLLVARDGQGDMAVSNAIGSNVFDILLGLGLPWALANMFKGKMVHVDIDGLLPLSVLLLVTLLLVYTATFLSGFVLTRGIGVFFFILYFVFVAYSLLHD 235          
BLAST of mRNA_H-elongata_contig74053.15095.1 vs. uniprot
Match: A0A7S0J6V7_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J6V7_9EUKA)

HSP 1 Score: 154 bits (390), Expect = 3.630e-43
Identity = 73/176 (41.48%), Postives = 119/176 (67.61%), Query Frame = 0
Query:    6 LSLPLQVAFAFTIPDCAKPKFQKFYVMTFLMSLVWIGTLTHFMVEWANAVGCYAGVSPIFMGLVVLAVGTSVPDALGSMIAARGGEANMAIANAVGSNVFDVLIGLGFPWFLRGVIYSEAMDVDRDGIELNVIILFCTAILFVLVLALNKWSMNTKMGFFLFFLYLIYVTFVIVRE 181
            ++ PL + F  +IP+C++P+ +  Y++TF MS++WIG L++FM  WA+ +GC  G+ P  MG+ VLA GTSVPDA+GS++ AR G+ +MA++NA+GSNVFD+L+GLG PW L  +I  E + VD DG+    ++L  T +     + L+ + +   +G F F LY ++V + ++ +
Sbjct:  116 IARPLFLLFELSIPNCSEPRNKHRYLITFTMSILWIGVLSYFMTTWASKLGCLWGIHPAVMGVTVLAAGTSVPDAIGSLLVARDGQGDMAVSNAIGSNVFDILLGLGLPWALANLIKGEEVPVDTDGLLPLSVLLMLTLVAVYAGIFLSGFVLTKSIGVFFFVLYFLFVAYSLLHD 291          
BLAST of mRNA_H-elongata_contig74053.15095.1 vs. uniprot
Match: A0A8K1CK46_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CK46_PYTOL)

HSP 1 Score: 159 bits (402), Expect = 1.560e-42
Identity = 81/181 (44.75%), Postives = 118/181 (65.19%), Query Frame = 0
Query:    4 FILSLPLQVAFAFTIPDCAKPKFQKF--YVMTFLMSLVWIGTLTHFMVEWANAVGCYAGVSPIFMGLVVLAVGTSVPDALGSMIAARGGEANMAIANAVGSNVFDVLIGLGFPWFLRGVIYSEAMDVDRDGIELNVIILFCTAILFVLVLALNKWSMNTKMGFFLFFLYLIYVTFVIVREL 182
            FIL+ P+ +A   TIPDC  P+F     +  TF++++VWI  L+HF V WA   GC AG+    MGL ++A GTS+PDAL S++ AR G+ +MA++NAVGSNVFD+L+GLG P+FL  +IY E + V  D +EL++ ILF   +  V++L  ++W ++   G  +  LY  YV F  +R L
Sbjct:  418 FILTRPIVIAMRLTIPDCRYPQFSGTIGFTSTFVLAIVWIAALSHFTVIWATKFGCIAGIPSALMGLTIIAAGTSIPDALSSILVARDGQGDMAVSNAVGSNVFDILLGLGLPFFLSNLIYKEPVVVVVDDLELSIFILFGVLLTVVVLLLASRWRLHPVTGAIMLVLYAAYVVFSYLRGL 598          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig74053.15095.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4C8_ECTSI2.080e-8775.96Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2G6T6_9STRA1.810e-5252.75Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2H048_9STRA3.500e-4950.28Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
D8LLM0_ECTSI7.500e-4944.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1GDC6_9STRA8.240e-4644.07Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A662XPZ6_9STRA2.300e-4443.65Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A2R5G219_9STRA2.220e-4344.44Sodium/potassium/calcium exchanger 1 n=1 Tax=Honda... [more]
A0A7S0LBD8_9EUKA2.300e-4341.48Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S0J6V7_9EUKA3.630e-4341.48Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A8K1CK46_PYTOL1.560e-4244.75Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004836Sodium/calcium exchanger proteinPRINTSPR01259NACAEXCHNGRcoord: 35..47
score: 40.49
coord: 74..87
score: 63.53
NoneNo IPR availableGENE3D1.20.1420.30coord: 3..181
e-value: 1.6E-23
score: 85.2
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 95..117
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 31..49
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 50..55
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 137..156
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 162..179
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 76..94
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 56..75
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 157..161
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 118..136
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 180..183
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..15
score: 0.674
NoneNo IPR availableTMHMMTMhelixcoord: 162..179
NoneNo IPR availableTMHMMTMhelixcoord: 135..152
NoneNo IPR availableTMHMMTMhelixcoord: 55..77
NoneNo IPR availableTMHMMTMhelixcoord: 100..122
NoneNo IPR availableTMHMMTMhelixcoord: 29..48
NoneNo IPR availableTMHMMTMhelixcoord: 2..19
IPR004837Sodium/calcium exchanger membrane regionPFAMPF01699Na_Ca_excoord: 29..178
e-value: 1.2E-29
score: 103.2
IPR004481Sodium/potassium/calcium exchangerPANTHERPTHR10846SODIUM/POTASSIUM/CALCIUM EXCHANGERcoord: 1..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig74053contigH-elongata_contig74053:2156..2707 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig74053.15095.1mRNA_H-elongata_contig74053.15095.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig74053 2156..2707 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig74053.15095.1 ID=prot_H-elongata_contig74053.15095.1|Name=mRNA_H-elongata_contig74053.15095.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=184bp
QALFILSLPLQVAFAFTIPDCAKPKFQKFYVMTFLMSLVWIGTLTHFMVE
WANAVGCYAGVSPIFMGLVVLAVGTSVPDALGSMIAARGGEANMAIANAV
GSNVFDVLIGLGFPWFLRGVIYSEAMDVDRDGIELNVIILFCTAILFVLV
LALNKWSMNTKMGFFLFFLYLIYVTFVIVRELV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004836Na_Ca_Ex
IPR004837NaCa_Exmemb
IPR004481K/Na/Ca-exchanger