prot_H-elongata_contig74009.15091.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig74009.15091.1
Unique Nameprot_H-elongata_contig74009.15091.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length215
Homology
BLAST of mRNA_H-elongata_contig74009.15091.1 vs. uniprot
Match: A0A6H5KQ14_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ14_9PHAE)

HSP 1 Score: 201 bits (512), Expect = 2.190e-58
Identity = 111/219 (50.68%), Postives = 147/219 (67.12%), Query Frame = 0
Query:    2 RTEGGRVDCVRVSNNMSSAQRVQAHLLDNFRFVEQAMLHKQCRAYAMQNMQAEVLASLGYVAQVLKTGNDNVQRLLAELVAEPSTAQLQYNPNSREFVNPSTAPPSGADVTMATGTSVPHFAELLRDQNVTELVRITPLTAHTEYGHLVALGSEGFCLCTCLRLLIGGLCCRHGLKAM-----HGKELSFNGTCITPRWRDGAATWTMAALAAKPAKLS 215
            R +GG V  V V   +S  + V+A  L +F FV +AM H++C  +A ++++ ++ A+ GY A  + TG D V+ LLAELVA+P+ A L Y+  S EF++P       A VTMAT TSV HFA+LL DQNV ELVRIT   A +E+GHLVALG +GF LCTCLR+L+ GL C H +KA+     + K  SFN  CI+PRWRD   +WTMA LAAKPA+L+
Sbjct:  248 RNKGGAVTRVPV-RKVSPQESVKASFLRHFSFVFEAMEHERCSRHAKEDVEEQIFAAFGYEAVTVATGQDAVRTLLAELVADPTKANLAYDICSGEFIDPGGEAAGPAHVTMATRTSVAHFADLLHDQNVEELVRITIFNAQSEFGHLVALGPDGFFLCTCLRMLVYGLPCPHCIKALAHMRGNDKVFSFNAACISPRWRDSETSWTMAHLAAKPARLA 465          
BLAST of mRNA_H-elongata_contig74009.15091.1 vs. uniprot
Match: D8LSE5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSE5_ECTSI)

HSP 1 Score: 186 bits (472), Expect = 2.760e-53
Identity = 106/216 (49.07%), Postives = 138/216 (63.89%), Query Frame = 0
Query:    1 RRTEGGRVDCVRVSNNMSSAQRVQAHLLDNFRFVEQAMLHKQCRAYAMQNMQAEVLASLGYVAQVLKTGNDNVQRLLAELVAEPSTAQLQYNPNSREFVNPSTAPPSGADVTMATGTSVPHFAELLRDQNVTELVRITPLTAHTEYGHLVALGSEGFCLCTCLRLLIGGLCCRHGLKAMHGKELS-FNGTCITPRWRDGAATWTMAALAAKPAKLS 215
            RR  GG V  V V  + S  +  +   L  F FV  A+ ++QC  +A ++ +A++L +L Y A  +    +  +RL  ELVA+P+ A L Y+  S E V+PS      A V+M + TSVPHFAELLRDQNV  +VRITP++  +E GHLVALG +GF LCTCLR L+ GL C H +KA+  +  S FNG  I+PRWRD    WTMAALAAKPAKLS
Sbjct:   13 RRNLGGTVARVAVQGH-SYVESFRTKHLRTFNFVLNAVKYEQCSQHATEDTEAQILGALSYEAIPVVRDEEAARRLFEELVADPTKANLTYDTGSGELVDPSIPTSEAAGVSMVSRTSVPHFAELLRDQNVHTVVRITPMSTASECGHLVALGPDGFFLCTCLRQLVYGLLCPHAIKALWYQRASQFNGATISPRWRDSETPWTMAALAAKPAKLS 227          
BLAST of mRNA_H-elongata_contig74009.15091.1 vs. uniprot
Match: D7FVI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVI8_ECTSI)

HSP 1 Score: 186 bits (472), Expect = 1.160e-52
Identity = 106/216 (49.07%), Postives = 138/216 (63.89%), Query Frame = 0
Query:    1 RRTEGGRVDCVRVSNNMSSAQRVQAHLLDNFRFVEQAMLHKQCRAYAMQNMQAEVLASLGYVAQVLKTGNDNVQRLLAELVAEPSTAQLQYNPNSREFVNPSTAPPSGADVTMATGTSVPHFAELLRDQNVTELVRITPLTAHTEYGHLVALGSEGFCLCTCLRLLIGGLCCRHGLKAMHGKELS-FNGTCITPRWRDGAATWTMAALAAKPAKLS 215
            RR  GG V  V V  + S  +  +   L  F FV  A+ ++QC  +A ++ +A++L +L Y A  +    +  +RL  ELVA+P+ A L Y+  S E V+PS      A V+M + TSVPHFAELLRDQNV  +VRITP++  +E GHLVALG +GF LCTCLR L+ GL C H +KA+  +  S FNG  I+PRWRD    WTMAALAAKPAKLS
Sbjct:  146 RRNLGGTVARVAVQGH-SYVESFRTKHLRTFNFVLNAVKYEQCSQHATEDTEAQILGALSYEAIPVVRDEEAARRLFEELVADPTKANLTYDTGSGELVDPSIPTSEAAGVSMVSRTSVPHFAELLRDQNVHTVVRITPMSTASECGHLVALGPDGFFLCTCLRQLVYGLLCPHAIKALWYQRASQFNGATISPRWRDSETPWTMAALAAKPAKLS 360          
BLAST of mRNA_H-elongata_contig74009.15091.1 vs. uniprot
Match: A0A6H5JXK5_9PHAE (SWIM-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK5_9PHAE)

HSP 1 Score: 190 bits (483), Expect = 2.910e-52
Identity = 99/216 (45.83%), Postives = 147/216 (68.06%), Query Frame = 0
Query:    1 RRTEGGRVDCVRVSNNMSSAQRVQAHLLDNFRFVEQAMLHKQCRAYAMQNMQAEVLASLGYVAQVLKTGNDNVQRLLAELVAEPSTAQLQYNPNSREFVNPSTAPPSGADVTMATGTSVPHFAELLRDQNVTELVRITPLTAHTEYGHLVALGSEGFCLCTCLRLLIGGLCCRHGLKAMHGKELS-FNGTCITPRWRDGAATWTMAALAAKPAKLS 215
            RR+ GG+V+ V +    S+  RV    +D FRF+  A+ H++   +AM++ +A+++A+L Y  + + +  D  +RLL +LVA+P+ A+L Y+  S E V+PS   P  + +TM + TSVPHFA+LLR QNV  +VRI+ +T  +E+GHLVA+GS+GF LCTCLR L+ GL C H +KA+  + ++ FNG  I P WRD +  WTM ALAA+PA+LS
Sbjct:  560 RRSTGGKVNKVSMRQAKSAMSRVTTSHVDQFRFILDALAHEKSSTHAMEDTEAQIVAALTYQDRTVVSDADAARRLLDDLVADPAQAKLVYDTRSGELVDPSHETPDASGITMVSRTSVPHFADLLRGQNVDAVVRISKITPPSEFGHLVAVGSDGFFLCTCLRQLVYGLLCPHVIKALWSQRITRFNGASIGPWWRDSSTPWTMEALAARPARLS 775          
BLAST of mRNA_H-elongata_contig74009.15091.1 vs. uniprot
Match: A0A6H5JB23_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB23_9PHAE)

HSP 1 Score: 187 bits (474), Expect = 1.050e-51
Identity = 104/216 (48.15%), Postives = 145/216 (67.13%), Query Frame = 0
Query:    1 RRTEGGRVDCVRVSNNMSSAQRVQAHLLDNFRFVEQAMLHKQCRAYAMQNMQAEVLASLGYVAQVLKTGNDNVQRLLAELVAEPSTAQLQYNPNSREFVNPSTAPPSGADVTMATGTSVPHFAELLRDQNVTELVRITPLTAHTEYGHLVALGSEGFCLCTCLRLLIGGLCCRHGLKAMHGKELS-FNGTCITPRWRDGAATWTMAALAAKPAKLS 215
            R+++GGR+    +S+ MSS + V+  LL +F FV  A+ H++   +A+++ +A+V+A+LGY A  L  G D  + LL ELVA+   A+L Y+ +S + ++P  A    A V+M + TSVPHFA LLRDQNV  +VR++ +T  +E+GHLVALG +GF LCTCLR L  GL C HGLKAM  + +  FNG  I+PRWR+    W MA LAAKPA LS
Sbjct:  469 RKSDGGRLPRAPLSS-MSSMENVKRGLLKHFSFVVDAVKHERSSTHAIKDTEAQVVAALGYNATCLVRGEDEARLLLDELVADADKAKLWYDTSSGDLIDPLQATTGAAGVSMVSRTSVPHFAHLLRDQNVNSVVRVSMITPPSEFGHLVALGPDGFFLCTCLRQLEHGLLCPHGLKAMWTEGVDRFNGATISPRWRESETPWLMADLAAKPATLS 683          
BLAST of mRNA_H-elongata_contig74009.15091.1 vs. uniprot
Match: D8LJH3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJH3_ECTSI)

HSP 1 Score: 185 bits (470), Expect = 1.290e-51
Identity = 106/216 (49.07%), Postives = 138/216 (63.89%), Query Frame = 0
Query:    1 RRTEGGRVDCVRVSNNMSSAQRVQAHLLDNFRFVEQAMLHKQCRAYAMQNMQAEVLASLGYVAQVLKTGNDNVQRLLAELVAEPSTAQLQYNPNSREFVNPSTAPPSGADVTMATGTSVPHFAELLRDQNVTELVRITPLTAHTEYGHLVALGSEGFCLCTCLRLLIGGLCCRHGLKAMHGKELS-FNGTCITPRWRDGAATWTMAALAAKPAKLS 215
            RR  GG V  V V  + S  +  +   L  F FV  A+ ++QC  +A ++ +A++L +L Y A  +    +  +RL  ELVA+P+ A L Y+  S E V+PS      A V+M + TSVPHFAELLRDQNV  +VRITP++  +E GHLVALG +GF LCTCLR L+ GL C H +KA+  +  S FNG  I+PRWRD    WTMAALAAKPAKLS
Sbjct:  146 RRNLGGTVARVAVQEH-SYVESFRTKHLRTFNFVLNAVKYEQCSQHATEDTEAQILGALSYEAIPVVRDEEAARRLFEELVADPTKANLTYDTGSGELVDPSIPTSEAACVSMVSRTSVPHFAELLRDQNVHTVVRITPMSTASECGHLVALGPDGFFLCTCLRQLVYGLLCPHAIKALWYQRASQFNGATISPRWRDSETPWTMAALAAKPAKLS 360          
BLAST of mRNA_H-elongata_contig74009.15091.1 vs. uniprot
Match: A0A6H5K1S8_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1S8_9PHAE)

HSP 1 Score: 182 bits (462), Expect = 4.160e-50
Identity = 103/211 (48.82%), Postives = 128/211 (60.66%), Query Frame = 0
Query:    3 TEGGRVDCVRVSNNMSSAQRVQAHLLDNFRFVEQAMLHKQCRAYAMQNMQAEVLASLGYVAQVLKTGNDNVQRLLAELVAEPSTAQLQYNPNSREFVNPSTAPPSGADVTMATGTSVPHFAELLRDQNVTELVRIT-PLTAHTEYGHLVALGSEGFCLCTCLRLLIGGLCCRHGLKAMHGKELSFNGTCITPRWRDGAATWTMAALAAKPA 212
            T GG +  VRV    S    V+   L +F+FV   MLH  C A+AM++M  E LA++GY A+ L TGND+V RLL + VA P  A L Y  +               DVT+AT TS+  FAELL+DQ +  LVR++      T+Y  LVALG +GF LCTCLR+L+ GL CRH L+AM G +L F G CI PRWRDG   WTM  LAAKPA
Sbjct:  187 TTGGPIQRVRVPTQSSFGD-VRDSWLADFKFVHDGMLHAGCSAFAMKDMSDEALAAVGYSAETLATGNDDVHRLLTDFVANPPQAGLLYETDV-------------GDVTLATRTSIEFFAELLKDQVLDRLVRVSRSFGDQTKYCQLVALGPDGFFLCTCLRILVDGLGCRHALRAMRGTDLGFTGACIAPRWRDGIMPWTMGRLAAKPA 383          
BLAST of mRNA_H-elongata_contig74009.15091.1 vs. uniprot
Match: A0A6H5JGY2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGY2_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 7.900e-49
Identity = 96/200 (48.00%), Postives = 137/200 (68.50%), Query Frame = 0
Query:   17 MSSAQRVQAHLLDNFRFVEQAMLHKQCRAYAMQNMQAEVLASLGYVAQVLKTGNDNVQRLLAELVAEPSTAQLQYNPNSREFVNPSTAPPSGADVTMATGTSVPHFAELLRDQNVTELVRITPLTAHTEYGHLVALGSEGFCLCTCLRLLIGGLCCRHGLKAMHGKEL-SFNGTCITPRWRDGAATWTMAALAAKPAKLS 215
            +SS + V+  LL +F FV  A+ +++C  +A+++ +A+V+A+LGY A  L  G D  +RLL EL A+P+ A+L Y+ +S + ++PS        V+M + TSVPH A+LLRDQNV  +VR++ +T  +EY HLVALG +GF LCTCLR L+ GL C HGL+A+  + + SFNG  I+PRWR+    W MA LAAKPA LS
Sbjct:  727 VSSMENVRRGLLRHFSFVVDAVKNERCSTHAIEDTEAQVVATLGYNATCLVRGEDEARRLLDELAADPAKAKLWYDTSSGDPMDPSQPTTEAPGVSMVSRTSVPHVADLLRDQNVNAVVRVSMITPLSEYSHLVALGPDGFFLCTCLRQLVYGLLCPHGLEALWAEGVVSFNGAIISPRWRESETPWLMAELAAKPASLS 926          
BLAST of mRNA_H-elongata_contig74009.15091.1 vs. uniprot
Match: A0A6H5JPJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPJ2_9PHAE)

HSP 1 Score: 164 bits (416), Expect = 1.980e-46
Identity = 100/221 (45.25%), Postives = 126/221 (57.01%), Query Frame = 0
Query:   18 SSAQRVQAHLLDNFRFVEQAMLHKQCRAYAMQ-----------------------NMQAEVLASLGYVAQVLKTGNDNVQRLLAELVAEPSTAQLQYNPNSREFVNPSTAPPSGADVTMATGTSVPHFAELLRDQNVTELVRITPLTAHTEYGHLVALGSEGFCLCTCLRLLIGGLCCRHGLKAMHGKELSFNGTCITPRWRDGAATWTMAALAAKPAKLS 215
            SS + V+A  L +F FV+  M    C AY++                        +M  E LA++GY A+ L TGN +VQRLLA+LVA P+ A L Y   S              DVT+ T TSV  FAELLRDQ +  LVR+T + + T + HLVALG +GF LCT LR+L+ GL  RH L+A+H  +L F G CI PRWRDG   WTMA LAAKPA L+
Sbjct:    4 SSFEVVKARWLGSFDFVQTGMRDAGCSAYSLTVGLAFISLAMGGRFWCRSFQAFGDMSDEALAAMGYKAETLATGNCDVQRLLADLVANPAGAGLLYETTS-------------GDVTLTTRTSVKFFAELLRDQILERLVRVTNVGSQTNHCHLVALGPDGFFLCTYLRILVEGLGYRHALRAIHDADLGFTGACIAPRWRDGIMPWTMAPLAAKPAVLA 211          
BLAST of mRNA_H-elongata_contig74009.15091.1 vs. uniprot
Match: A0A6H5KFX3_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFX3_9PHAE)

HSP 1 Score: 171 bits (433), Expect = 6.760e-46
Identity = 95/203 (46.80%), Postives = 122/203 (60.10%), Query Frame = 0
Query:   12 RVSNNMSSAQRVQAHLLDNFRFVEQAMLHKQCRAYAMQNMQAEVLASLGYVAQVLKTGNDNVQRLLAELVAEPSTAQLQYNPNSREFVNPSTAPPSGADVTMATGTSVPHFAELLRDQNVTELVRITPLTAH--TEYGHLVALGSEGFCLCTCLRLLIGGLCCRHGLKAMHGKELSFNGTCITPRWRDGAATWTMAALAAKPA 212
            R     S  + V    L+ F +V +AM H +C AYAM++M  E LA++ Y  ++L TGN++V R +A +V++P+ A L Y+P S            G D T  T TSV  FAELL DQ + +LVRIT   +     YGHLVALG +GF LCTCLRLL+ GL CRHGL+A+   +  FNG CI  RWRD    WTM  LAAK A
Sbjct:  268 RTQQAASPLETVTNSWLEGFDYVRRAMRHVECSAYAMKDMSTEALAAMAYDVEILTTGNEDVHREIARIVSDPAIAGLSYDPTS-----------GGGDGTWTTRTSVKFFAELLEDQVLDKLVRITRSFSDGGPNYGHLVALGPDGFVLCTCLRLLVYGLGCRHGLRAVRDTDFGFNGGCIASRWRDSTQPWTMEHLAAKRA 459          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig74009.15091.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KQ14_9PHAE2.190e-5850.68SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LSE5_ECTSI2.760e-5349.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FVI8_ECTSI1.160e-5249.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JXK5_9PHAE2.910e-5245.83SWIM-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5JB23_9PHAE1.050e-5148.15MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LJH3_ECTSI1.290e-5149.07Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5K1S8_9PHAE4.160e-5048.82SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JGY2_9PHAE7.900e-4948.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JPJ2_9PHAE1.980e-4645.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFX3_9PHAE6.760e-4646.80SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007527Zinc finger, SWIM-typePROSITEPS50966ZF_SWIMcoord: 148..183
score: 8.061

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig74009contigH-elongata_contig74009:9..1060 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig74009.15091.1mRNA_H-elongata_contig74009.15091.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig74009 9..1060 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig74009.15091.1 ID=prot_H-elongata_contig74009.15091.1|Name=mRNA_H-elongata_contig74009.15091.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=215bp
RRTEGGRVDCVRVSNNMSSAQRVQAHLLDNFRFVEQAMLHKQCRAYAMQN
MQAEVLASLGYVAQVLKTGNDNVQRLLAELVAEPSTAQLQYNPNSREFVN
PSTAPPSGADVTMATGTSVPHFAELLRDQNVTELVRITPLTAHTEYGHLV
ALGSEGFCLCTCLRLLIGGLCCRHGLKAMHGKELSFNGTCITPRWRDGAA
TWTMAALAAKPAKLS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007527Znf_SWIM