mRNA_H-elongata_contig73942.15085.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig73942.15085.1 vs. uniprot
Match: UPI00165228C0 (uncharacterized protein LOC118478942 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00165228C0) HSP 1 Score: 62.0 bits (149), Expect = 1.760e-10 Identity = 31/79 (39.24%), Postives = 45/79 (56.96%), Query Frame = 1
Query: 1 MDNTRLPKCLMFGEIMRGAGRAGGKEKEWMGCLFENLKIFGINADQWTIAAQDEVEWRKTAEQGAEHFIENCISEEKVR 237
M ++RLPK LM+GE++ G GG++K + CL +LK GI D W + AQD WR +GA+ I+E K +
Sbjct: 1 MADSRLPKQLMYGELLHGKRSVGGQKKRFKDCLKISLKELGILNDSWEMLAQDRPSWRCKLTKGAKAAEAKRIAEAKQK 79
BLAST of mRNA_H-elongata_contig73942.15085.1 vs. uniprot
Match: A0A7M3PXV5_SPIER (Hypothetical protein n=1 Tax=Spirometra erinaceieuropaei TaxID=99802 RepID=A0A7M3PXV5_SPIER) HSP 1 Score: 60.1 bits (144), Expect = 1.010e-8 Identity = 29/79 (36.71%), Postives = 44/79 (55.70%), Query Frame = 1
Query: 1 MDNTRLPKCLMFGEIMRGAGRAGGKEKEWMGCLFENLKIFGINADQWTIAAQDEVEWRKTAEQGAEHFIENCISEEKVR 237
MD+ RLPK L++G++ G+ R GG+ + + L +LK IN W A D WR+T + GA + N I+ KV+
Sbjct: 428 MDDERLPKRLLYGDVATGSRRQGGQIRRYKDTLKSSLKCLQINPTNWEELALDRPTWRRTLKTGAAIYEANRIAAAKVK 506
BLAST of mRNA_H-elongata_contig73942.15085.1 vs. uniprot
Match: A0A654HMC6_9CEST (Uncharacterized protein n=1 Tax=Sparganum proliferum TaxID=64606 RepID=A0A654HMC6_9CEST) HSP 1 Score: 59.7 bits (143), Expect = 1.290e-8 Identity = 28/79 (35.44%), Postives = 45/79 (56.96%), Query Frame = 1
Query: 1 MDNTRLPKCLMFGEIMRGAGRAGGKEKEWMGCLFENLKIFGINADQWTIAAQDEVEWRKTAEQGAEHFIENCISEEKVR 237
MD+ RLPK L++G+++ G+ R GG+ + + L +LK +N W A D WR+T + GA + N I+ KV+
Sbjct: 12 MDDERLPKRLLYGDVVTGSRRQGGQIRRYKDTLKSSLKRLQLNPTNWEELALDRPTWRRTVKTGAAIYEANHIAAAKVK 90
BLAST of mRNA_H-elongata_contig73942.15085.1 vs. uniprot
Match: C3ZFY5_BRAFL (C2H2-type domain-containing protein n=2 Tax=Branchiostoma floridae TaxID=7739 RepID=C3ZFY5_BRAFL) HSP 1 Score: 57.8 bits (138), Expect = 2.130e-8 Identity = 26/65 (40.00%), Postives = 35/65 (53.85%), Query Frame = 1
Query: 1 MDNTRLPKCLMFGEIMRGAGRAGGKEKEWMGCLFENLKIFGINADQWTIAAQDEVEWRKTAEQGA 195
MD+ RLPK L++GE+ G G + + L LK F I D W +AA D +WR+ QGA
Sbjct: 62 MDDHRLPKILLYGELAEGKRHVGRPKLRYKDSLKATLKDFSIPVDSWELAASDRSQWRRLVHQGA 126
BLAST of mRNA_H-elongata_contig73942.15085.1 vs. uniprot
Match: A0A654HW91_9CEST (Uncharacterized protein n=1 Tax=Sparganum proliferum TaxID=64606 RepID=A0A654HW91_9CEST) HSP 1 Score: 57.8 bits (138), Expect = 6.660e-8 Identity = 28/79 (35.44%), Postives = 43/79 (54.43%), Query Frame = 1
Query: 1 MDNTRLPKCLMFGEIMRGAGRAGGKEKEWMGCLFENLKIFGINADQWTIAAQDEVEWRKTAEQGAEHFIENCISEEKVR 237
MD+ RLPK L++G++ G+ R G + + + L +LK IN W A D WR+T + GA + N I+ KV+
Sbjct: 759 MDDERLPKRLIYGDVATGSRRQGSQIRRYKDTLKSSLKRLQINPTNWEEIAHDRPTWRRTVKTGAAIYEANRIAAAKVK 837
BLAST of mRNA_H-elongata_contig73942.15085.1 vs. uniprot
Match: A0A6H5JMA1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMA1_9PHAE) HSP 1 Score: 56.6 bits (135), Expect = 1.080e-7 Identity = 27/73 (36.99%), Postives = 43/73 (58.90%), Query Frame = 1
Query: 1 MDNTRLPKCLMFGEIMRGAGRAGGKEKEWMGCLFENLKIFGINADQ----WTIAAQDEVEWRKTAEQGAEHFI 207
M++ RLPK ++ GE+ GAG GG+E +W+ L E+L FG+ ++ W +A+D+ W E GA F+
Sbjct: 144 MEDNRLPKRMLLGEMAGGAGYRGGQESDWVYRLGEDLVAFGMKEEKEGGRWKESAKDQEAWYDKIEDGAAWFM 216
BLAST of mRNA_H-elongata_contig73942.15085.1 vs. uniprot
Match: A0A6H5JHK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHK9_9PHAE) HSP 1 Score: 56.2 bits (134), Expect = 1.080e-7 Identity = 26/73 (35.62%), Postives = 42/73 (57.53%), Query Frame = 1
Query: 1 MDNTRLPKCLMFGEIMRGAGRAGGKEKEWMGCLFENLKIFGINADQ----WTIAAQDEVEWRKTAEQGAEHFI 207
M+++RLPK ++ GE+ RG G GG+E +W+ L E+L F + ++ W +A+D W E GA F+
Sbjct: 121 MEDSRLPKRMLLGEMARGVGYRGGQESDWVSRLGEDLVAFNMGDEKEGGKWKESAKDSEVWYNKVEDGAAWFM 193
BLAST of mRNA_H-elongata_contig73942.15085.1 vs. uniprot
Match: A0A183SH26_SCHSO (C2H2-type domain-containing protein n=1 Tax=Schistocephalus solidus TaxID=70667 RepID=A0A183SH26_SCHSO) HSP 1 Score: 56.2 bits (134), Expect = 1.170e-7 Identity = 29/79 (36.71%), Postives = 41/79 (51.90%), Query Frame = 1
Query: 1 MDNTRLPKCLMFGEIMRGAGRAGGKEKEWMGCLFENLKIFGINADQWTIAAQDEVEWRKTAEQGAEHFIENCISEEKVR 237
MDN RLPK L++G++ G+ R G+ + + L +LK IN W Q+ WRKT GAE N I+ K +
Sbjct: 1 MDNERLPKQLLYGDVAMGSYRQEGQVRSYKDTLKTSLKQLQINPATWEDLTQNRPAWRKTVNTGAEICEANKITAAKTK 79
BLAST of mRNA_H-elongata_contig73942.15085.1 vs. uniprot
Match: A0A654GTZ3_9CEST (C2H2-type domain-containing protein n=1 Tax=Sparganum proliferum TaxID=64606 RepID=A0A654GTZ3_9CEST) HSP 1 Score: 57.0 bits (136), Expect = 1.220e-7 Identity = 28/79 (35.44%), Postives = 43/79 (54.43%), Query Frame = 1
Query: 1 MDNTRLPKCLMFGEIMRGAGRAGGKEKEWMGCLFENLKIFGINADQWTIAAQDEVEWRKTAEQGAEHFIENCISEEKVR 237
MD+ RLPK L++G++ G+ R GG+ + + L +LK I W A D WR+T + GA + N I+ KV+
Sbjct: 425 MDDERLPKRLLYGDVATGSRRQGGQIRRYNDTLKSSLKRLQIKPTNWEELALDRPTWRRTVKTGAAIYEANRIAAAKVK 503
BLAST of mRNA_H-elongata_contig73942.15085.1 vs. uniprot
Match: A0A7M3QR85_SPIER (Hypothetical protein n=1 Tax=Spirometra erinaceieuropaei TaxID=99802 RepID=A0A7M3QR85_SPIER) HSP 1 Score: 56.6 bits (135), Expect = 1.570e-7 Identity = 28/78 (35.90%), Postives = 43/78 (55.13%), Query Frame = 1
Query: 1 MDNTRLPKCLMFGEIMRGAGRAGGKEKEWMGCLFENLKIFGINADQWTIAAQDEVEWRKTAEQGAEHFIENCISEEKV 234
MD+ RLPK L++G++ G+ R GG+ + + L +LK IN W A+D WR+T + GA + N I+ K
Sbjct: 253 MDDERLPKRLLYGDVATGSRRQGGQIRRYKDTLKFSLKRLQINPANWEDLARDRPTWRRTVKTGAAIYGANRIAAAKT 330 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig73942.15085.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig73942.15085.1 >prot_H-elongata_contig73942.15085.1 ID=prot_H-elongata_contig73942.15085.1|Name=mRNA_H-elongata_contig73942.15085.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=79bp MDNTRLPKCLMFGEIMRGAGRAGGKEKEWMGCLFENLKIFGINADQWTIAback to top mRNA from alignment at H-elongata_contig73942:1944..2180- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig73942.15085.1 ID=mRNA_H-elongata_contig73942.15085.1|Name=mRNA_H-elongata_contig73942.15085.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=237bp|location=Sequence derived from alignment at H-elongata_contig73942:1944..2180- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig73942:1944..2180- >mRNA_H-elongata_contig73942.15085.1 ID=mRNA_H-elongata_contig73942.15085.1|Name=mRNA_H-elongata_contig73942.15085.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=474bp|location=Sequence derived from alignment at H-elongata_contig73942:1944..2180- (Himanthalia elongata Himel1 dioecious)back to top |