mRNA_H-elongata_contig73940.15084.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig73940.15084.1 vs. uniprot
Match: A0A6H5L5V8_9PHAE (MsrB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L5V8_9PHAE) HSP 1 Score: 176 bits (447), Expect = 4.060e-54 Identity = 70/86 (81.40%), Postives = 80/86 (93.02%), Query Frame = 1
Query: 28 FVLAGCRTPLYESSHKFECGCGWPGFWTNIKDAVFEERDSDGMRNEIMCSSCGGHLGHVFRGEGFGNPEPNERHCVNGLSIAFVPE 285
+V AGCRTPLYE SHKF+CGCGWPGFWTNI+DAV+EE+D+DG R EI+CS CGGHLGHVFRGEGFGNPEPNERHCVN +S+AF+PE
Sbjct: 119 YVCAGCRTPLYEDSHKFDCGCGWPGFWTNIQDAVYEEKDADGRRCEILCSGCGGHLGHVFRGEGFGNPEPNERHCVNSVSLAFIPE 204
BLAST of mRNA_H-elongata_contig73940.15084.1 vs. uniprot
Match: A0A836C9K1_9STRA (Mss4-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9K1_9STRA) HSP 1 Score: 166 bits (421), Expect = 3.160e-50 Identity = 67/85 (78.82%), Postives = 74/85 (87.06%), Query Frame = 1
Query: 28 FVLAGCRTPLYESSHKFECGCGWPGFWTNIKDAVFEERDSDGMRNEIMCSSCGGHLGHVFRGEGFGNPEPNERHCVNGLSIAFVP 282
+V C TPLY+SSHKF+CGCGWPGFWTNIKDAV+EERD DG R EI+CSSCGGHLGHVFRGEGF NP PNERHCVN +SI F+P
Sbjct: 118 YVCGCCGTPLYDSSHKFDCGCGWPGFWTNIKDAVYEERDKDGFRAEILCSSCGGHLGHVFRGEGFSNPPPNERHCVNSVSIGFIP 202
BLAST of mRNA_H-elongata_contig73940.15084.1 vs. uniprot
Match: A0A7S2V6B3_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6B3_9STRA) HSP 1 Score: 162 bits (409), Expect = 2.630e-48 Identity = 65/86 (75.58%), Postives = 73/86 (84.88%), Query Frame = 1
Query: 28 FVLAGCRTPLYESSHKFECGCGWPGFWTNIKDAVFEERDSDGMRNEIMCSSCGGHLGHVFRGEGFGNPEPNERHCVNGLSIAFVPE 285
++ AGC TPLY S HKF+CGCGWPGFWTNIK AV+E+ D DG R EIMCS+CG HLGHVFRGEGF NP PNERHCVN +SIAF+PE
Sbjct: 125 YICAGCSTPLYTSEHKFDCGCGWPGFWTNIKGAVYEKLDKDGFRCEIMCSACGSHLGHVFRGEGFNNPPPNERHCVNSVSIAFLPE 210
BLAST of mRNA_H-elongata_contig73940.15084.1 vs. uniprot
Match: W7U3G1_9STRA (Peptide methionine sulfoxide reductase b5 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3G1_9STRA) HSP 1 Score: 160 bits (404), Expect = 2.810e-47 Identity = 63/86 (73.26%), Postives = 74/86 (86.05%), Query Frame = 1
Query: 28 FVLAGCRTPLYESSHKFECGCGWPGFWTNIKDAVFEERDSDGMRNEIMCSSCGGHLGHVFRGEGFGNPEPNERHCVNGLSIAFVPE 285
+V GC+TPLY S+ KF+CGCGWPGFWTNIKDAV+E+RD+DG R EI+CS C GHLGHVFR EGFGNP P+ERHCVN +S+ FVPE
Sbjct: 151 YVCTGCKTPLYTSAMKFDCGCGWPGFWTNIKDAVYEQRDADGFRCEILCSECDGHLGHVFRNEGFGNPPPDERHCVNSVSVGFVPE 236
BLAST of mRNA_H-elongata_contig73940.15084.1 vs. uniprot
Match: W6KXY4_9TRYP (MsrB domain-containing protein n=1 Tax=Phytomonas sp. isolate EM1 TaxID=134006 RepID=W6KXY4_9TRYP) HSP 1 Score: 144 bits (363), Expect = 2.480e-42 Identity = 59/86 (68.60%), Postives = 68/86 (79.07%), Query Frame = 1
Query: 28 FVLAGCRTPLYESSHKFECGCGWPGFWTNIKDAVFEERDSDGMRNEIMCSSCGGHLGHVFRGEGFGNPEPNERHCVNGLSIAFVPE 285
+V AGC TPLY S+ KF CGCGWPGFW + AV EE D+DGMR EI+C++C GHLGHVFRGEGF NP PNERHCVN SI F+P+
Sbjct: 64 YVCAGCGTPLYASAMKFACGCGWPGFWDCLPKAVREEPDADGMRTEILCNACNGHLGHVFRGEGFKNPPPNERHCVNSSSIMFIPK 149
BLAST of mRNA_H-elongata_contig73940.15084.1 vs. uniprot
Match: A0A813KAL6_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813KAL6_POLGL) HSP 1 Score: 139 bits (350), Expect = 1.080e-39 Identity = 57/93 (61.29%), Postives = 70/93 (75.27%), Query Frame = 1
Query: 4 NGSYTPVPFVLAGCRTPLYESSHKFECGCGWPGFWTNIKDAVFEERDSDGMRNEIMCSSCGGHLGHVFRGEGFGNPEPNERHCVNGLSIAFVP 282
G Y + AG PLY S KF+CGCGWPGFWTN+KDAV+E+RD+DG R E++CS C GH+GHVFRGE FG+P +ERHCVN LS+ F+P
Sbjct: 96 EGVYACAGCLAAGFEVPLYTSRMKFDCGCGWPGFWTNVKDAVYEKRDADGRRCEVLCSRCDGHMGHVFRGEAFGHPT-DERHCVNSLSLVFLP 187
BLAST of mRNA_H-elongata_contig73940.15084.1 vs. uniprot
Match: W6L550_9TRYP (MsrB domain-containing protein n=1 Tax=Phytomonas sp. isolate Hart1 TaxID=134013 RepID=W6L550_9TRYP) HSP 1 Score: 137 bits (346), Expect = 2.670e-39 Identity = 57/86 (66.28%), Postives = 66/86 (76.74%), Query Frame = 1
Query: 28 FVLAGCRTPLYESSHKFECGCGWPGFWTNIKDAVFEERDSDGMRNEIMCSSCGGHLGHVFRGEGFGNPEPNERHCVNGLSIAFVPE 285
+V AGC TPLY S+ KF CGCGWPGFW + AV EE D+DG R EI+C++C GHLGHVFR EGF NP PNERHCVN SI F+P+
Sbjct: 99 YVCAGCDTPLYTSTMKFACGCGWPGFWDCLPKAVREEPDADGRRTEIICNACNGHLGHVFRHEGFKNPLPNERHCVNNSSIKFIPK 184
BLAST of mRNA_H-elongata_contig73940.15084.1 vs. uniprot
Match: A0A7S1MB94_NEODS (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Neobodo designis TaxID=312471 RepID=A0A7S1MB94_NEODS) HSP 1 Score: 135 bits (340), Expect = 4.400e-39 Identity = 59/91 (64.84%), Postives = 68/91 (74.73%), Query Frame = 1
Query: 13 YTPVPFVLAGCRTPLYESSHKFECGCGWPGFWTNIKDAVFEERDSDGMRNEIMCSSCGGHLGHVFRGEGFGNPEPNERHCVNGLSIAFVPE 285
Y + AGC T LY S KF+CGCGWPGFWTN+ AV EE D+DG R EI+C++C GHLGHVFRGEGF NP NERHCVNG S+ FVP+
Sbjct: 40 YAAGNYHCAGCDTLLYTSEMKFDCGCGWPGFWTNVDKAVREEPDADGHRVEILCNACNGHLGHVFRGEGFPNPL-NERHCVNGTSLKFVPK 129
BLAST of mRNA_H-elongata_contig73940.15084.1 vs. uniprot
Match: A0A0M9G8X6_9TRYP (MsrB domain-containing protein n=1 Tax=Leptomonas pyrrhocoris TaxID=157538 RepID=A0A0M9G8X6_9TRYP) HSP 1 Score: 136 bits (343), Expect = 8.790e-39 Identity = 55/90 (61.11%), Postives = 66/90 (73.33%), Query Frame = 1
Query: 13 YTPVPFVLAGCRTPLYESSHKFECGCGWPGFWTNIKDAVFEERDSDGMRNEIMCSSCGGHLGHVFRGEGFGNPEPNERHCVNGLSIAFVP 282
Y +V A C+TPLY S+ KF CGCGWPGFW +I+ AV E+ D DG R EI+C++C HLGH+FR EGF NP PNERHCVN SI F+P
Sbjct: 98 YDEGEYVCAACKTPLYTSAMKFACGCGWPGFWDSIQKAVREQPDKDGRRVEIVCNACNSHLGHIFRHEGFSNPPPNERHCVNSTSILFIP 187
BLAST of mRNA_H-elongata_contig73940.15084.1 vs. uniprot
Match: A0A812INW2_SYMPI (MSRB5 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812INW2_SYMPI) HSP 1 Score: 134 bits (337), Expect = 4.910e-38 Identity = 57/93 (61.29%), Postives = 70/93 (75.27%), Query Frame = 1
Query: 4 NGSYTPVPFVLAGCRTPLYESSHKFECGCGWPGFWTNIKDAVFEERDSDGMRNEIMCSSCGGHLGHVFRGEGFGNPEPNERHCVNGLSIAFVP 282
+G Y AG + PLY SS KF+CGCGWPGFWTN++ AV+E+RD+DG R EI+CS C GH+GHVFRGEGFG +ERHCVN LS+ F+P
Sbjct: 71 SGIYICAGCFAAGQQVPLYTSSMKFDCGCGWPGFWTNVQGAVYEQRDADGRRCEILCSKCEGHMGHVFRGEGFGYCT-DERHCVNSLSLVFLP 162 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig73940.15084.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig73940.15084.1 >prot_H-elongata_contig73940.15084.1 ID=prot_H-elongata_contig73940.15084.1|Name=mRNA_H-elongata_contig73940.15084.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=95bp LNGSYTPVPFVLAGCRTPLYESSHKFECGCGWPGFWTNIKDAVFEERDSDback to top mRNA from alignment at H-elongata_contig73940:1457..2142- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig73940.15084.1 ID=mRNA_H-elongata_contig73940.15084.1|Name=mRNA_H-elongata_contig73940.15084.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=686bp|location=Sequence derived from alignment at H-elongata_contig73940:1457..2142- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig73940:1457..2142- >mRNA_H-elongata_contig73940.15084.1 ID=mRNA_H-elongata_contig73940.15084.1|Name=mRNA_H-elongata_contig73940.15084.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=570bp|location=Sequence derived from alignment at H-elongata_contig73940:1457..2142- (Himanthalia elongata Himel1 dioecious)back to top |