mRNA_H-elongata_contig73929.15083.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig73929.15083.1 vs. uniprot
Match: A0A6H5KHX7_9PHAE (Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHX7_9PHAE) HSP 1 Score: 264 bits (674), Expect = 1.830e-85 Identity = 129/170 (75.88%), Postives = 148/170 (87.06%), Query Frame = 1
Query: 1 KGCLVASINRGCKAITQGGGCHAALLKDGITRAPCLRMPDAMAAAALKRWSDDPQNFESVRAAFQTTTNFGKLQGVTSTVAGRNVFLRFNCFAGDAMGMNMISKGVLAVMELLQKVFPEMQLVAISGNMCSDKKSAAINWIEGRGKSVVCEARIPSKYVEATLKTTVKVK 510
+GCLVAS AALLKDGITRAPCLRMPDAMAAA LK+WS+ P+NFE+++AAFQTTT FGKLQG+ STVAGRNV+LRFNCFAGDAMGMNM+SKGVLAV++LLQ+ FPEM+LVAISGNMC+DKKSAAINW+EGRGKS+VCEARIP K+VEATLKTTVK +
Sbjct: 60 EGCLVASTXXXXXXXXXXXXXXAALLKDGITRAPCLRMPDAMAAADLKKWSETPENFEAIKAAFQTTTRFGKLQGLMSTVAGRNVYLRFNCFAGDAMGMNMVSKGVLAVVDLLQEEFPEMELVAISGNMCTDKKSAAINWVEGRGKSIVCEARIPGKHVEATLKTTVKAR 229
BLAST of mRNA_H-elongata_contig73929.15083.1 vs. uniprot
Match: D7FUE1_ECTSI (Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUE1_ECTSI) HSP 1 Score: 265 bits (676), Expect = 1.900e-81 Identity = 131/169 (77.51%), Postives = 147/169 (86.98%), Query Frame = 1
Query: 1 KGCLVASINRGCKAITQGGGCHAALLKDGITRAPCLRMPDAMAAAALKRWSDDPQNFESVRAAFQTTTNFGKLQGVTSTVAGRNVFLRFNCFAGDAMGMNMISKGVLAVMELLQKVFPEMQLVAISGNMCSDKKSAAINWIEGRGKSVVCEARIPSKYVEATLKTTVKV 507
+GCLVAS AALLKDGITRAPCLRMPDAMAAA LK+WS+ P NFE+++AAFQTTT FGKLQG+ STVAGRNV+LRFNCFAGDAMGMNM+SKGVLAV++LLQK FPEM+LVAISGNMC+DKKSAAINW+EGRGKS+VCEARIP K+VEATLKTTVKV
Sbjct: 325 EGCLVASTXXXXXXXXXXXXXXAALLKDGITRAPCLRMPDAMAAADLKKWSEMPDNFEAIKAAFQTTTRFGKLQGLMSTVAGRNVYLRFNCFAGDAMGMNMVSKGVLAVVDLLQKEFPEMELVAISGNMCTDKKSAAINWVEGRGKSIVCEARIPGKHVEATLKTTVKV 493
BLAST of mRNA_H-elongata_contig73929.15083.1 vs. uniprot
Match: A0A835YX65_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX65_9STRA) HSP 1 Score: 253 bits (646), Expect = 8.500e-79 Identity = 119/168 (70.83%), Postives = 144/168 (85.71%), Query Frame = 1
Query: 1 KGCLVASINRGCKAITQGGGCHAALLKDGITRAPCLRMPDAMAAAALKRWSDDPQNFESVRAAFQTTTNFGKLQGVTSTVAGRNVFLRFNCFAGDAMGMNMISKGVLAVMELLQKVFPEMQLVAISGNMCSDKKSAAINWIEGRGKSVVCEARIPSKYVEATLKTTVK 504
+GCLVAS NRGCKAI+QGGG + +LKDGITRAPCLRMPD + AA +K+W + P NF V+AAF++TT+FG+L VT VAGRNV+LRF C AGDAMGMNM+SKG LA ++LL + FPE++L+AISGNMC+DKK AAINWIEGRGKSVVCEARIP +YVE+TLKTTV+
Sbjct: 249 EGCLVASTNRGCKAISQGGGARSVVLKDGITRAPCLRMPDTIGAARVKQWVEAPANFARVKAAFESTTSFGRLNAVTGAVAGRNVYLRFVCAAGDAMGMNMVSKGCLAAVDLLTEAFPELELIAISGNMCTDKKPAAINWIEGRGKSVVCEARIPGRYVESTLKTTVR 416
BLAST of mRNA_H-elongata_contig73929.15083.1 vs. uniprot
Match: A0A7S1Y0Q7_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1Y0Q7_9STRA) HSP 1 Score: 233 bits (593), Expect = 4.060e-72 Identity = 114/168 (67.86%), Postives = 138/168 (82.14%), Query Frame = 1
Query: 1 KGCLVASINRGCKAITQGGGCHAALLKDGITRAPCLRMPDAMAAAALKRWSDDPQNFESVRAAFQTTTNFGKLQGVTSTVAGRNVFLRFNCFAGDAMGMNMISKGVLAVMELLQKVFPEMQLVAISGNMCSDKKSAAINWIEGRGKSVVCEARIPSKYVEATLKTTVK 504
+GCLVAS NRGCKAIT GG A +LKDGITRAPC+ MP AMAAA LK W ++P+NF++++ AF +TT+FG+L+ T T+AGRNV+LR CFAGDAMGMNM+SKG L V+ELL++ FPEM+LVAISGN+C DKK AAINWIEGRGKSVV EA I + V TLKTTV+
Sbjct: 125 EGCLVASTNRGCKAITACGGARARVLKDGITRAPCILMPSAMAAADLKAWVEEPENFQAIQNAFNSTTSFGRLKSCTPTIAGRNVYLRCVCFAGDAMGMNMVSKGCLKVIELLEEHFPEMELVAISGNVCCDKKPAAINWIEGRGKSVVVEATITADVVRKTLKTTVE 292
BLAST of mRNA_H-elongata_contig73929.15083.1 vs. uniprot
Match: A0A7S2EB74_TRICV (3-hydroxy-3-methylglutaryl coenzyme A reductase (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EB74_TRICV) HSP 1 Score: 238 bits (606), Expect = 5.080e-72 Identity = 114/167 (68.26%), Postives = 138/167 (82.63%), Query Frame = 1
Query: 1 KGCLVASINRGCKAITQGGGCHAALLKDGITRAPCLRMPDAMAAAALKRWSDDPQNFESVRAAFQTTTNFGKLQGVTSTVAGRNVFLRFNCFAGDAMGMNMISKGVLAVMELLQKVFPEMQLVAISGNMCSDKKSAAINWIEGRGKSVVCEARIPSKYVEATLKTTV 501
+GCLVAS NRGCKAI+QGGG +A+++DGITRAPC+RM AM AA LK W +DP NF +++AF++TT+FGKL G TVAGRNV+LR CF+GDAMGMNM+SKG LAV+ELL+ FP ++LVA+SGNMC+DKK+AA NWIEGRGKSVV EA IP V ATLKTTV
Sbjct: 346 EGCLVASANRGCKAISQGGGARSAVIRDGITRAPCVRMRSAMEAAELKLWCEDPANFARLKSAFESTTSFGKLLGAHPTVAGRNVYLRLRCFSGDAMGMNMVSKGSLAVIELLRSTFPSLELVALSGNMCTDKKAAATNWIEGRGKSVVVEATIPKDVVRATLKTTV 512
BLAST of mRNA_H-elongata_contig73929.15083.1 vs. uniprot
Match: B7GE13_PHATC (3-hydroxy-3-methylglutaryl coenzyme A reductase (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GE13_PHATC) HSP 1 Score: 226 bits (576), Expect = 1.620e-70 Identity = 111/167 (66.47%), Postives = 133/167 (79.64%), Query Frame = 1
Query: 1 KGCLVASINRGCKAITQGGGCHAALLKDGITRAPCLRMPDAMAAAALKRWSDDPQNFESVRAAFQTTTNFGKLQGVTSTVAGRNVFLRFNCFAGDAMGMNMISKGVLAVMELLQKVFPEMQLVAISGNMCSDKKSAAINWIEGRGKSVVCEARIPSKYVEATLKTTV 501
+GCLVAS NRG KAIT GGG A LL+DGITRAPC+RMP A AA LK W + PQ+F +++ AF++TT+FGKL TVAGRNV+LR CF+GDAMGMNM+SKG LAV+E LQ+ FPE+ LVA+SGNMC+DKK+AA NW+EGRGKS+V EA IP V TLKTTV
Sbjct: 53 EGCLVASTNRGAKAITAGGGATAVLLRDGITRAPCVRMPSAAQAAHLKLWCETPQHFSTLKRAFESTTSFGKLLKCAPTVAGRNVYLRLTCFSGDAMGMNMVSKGSLAVIETLQQEFPELVLVALSGNMCTDKKAAATNWLEGRGKSIVVEATIPKDVVTNTLKTTV 219
BLAST of mRNA_H-elongata_contig73929.15083.1 vs. uniprot
Match: A0A1Z5KS57_FISSO (3-hydroxy-3-methylglutaryl coenzyme A reductase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KS57_FISSO) HSP 1 Score: 232 bits (591), Expect = 3.410e-70 Identity = 111/167 (66.47%), Postives = 137/167 (82.04%), Query Frame = 1
Query: 1 KGCLVASINRGCKAITQGGGCHAALLKDGITRAPCLRMPDAMAAAALKRWSDDPQNFESVRAAFQTTTNFGKLQGVTSTVAGRNVFLRFNCFAGDAMGMNMISKGVLAVMELLQKVFPEMQLVAISGNMCSDKKSAAINWIEGRGKSVVCEARIPSKYVEATLKTTV 501
+GCLVAS NRG KAIT+GGG A +++DGITRAPC+RMP AMAAA LK W + P+NF ++AAF++TT+FGKL +T+AG+NV+LR CF+GDAMGMNM+SKG LAV+E L+K FPE+ LVA+SGNMC+DKK+AA NW+EGRGKSVV EA IP V TLKTTV
Sbjct: 274 EGCLVASTNRGAKAITEGGGALAQIVRDGITRAPCIRMPTAMAAAQLKLWCETPENFVQMKAAFESTTSFGKLHECKATIAGKNVYLRLVCFSGDAMGMNMVSKGTLAVIECLRKEFPELSLVALSGNMCTDKKAAATNWLEGRGKSVVVEATIPKDVVRKTLKTTV 440
BLAST of mRNA_H-elongata_contig73929.15083.1 vs. uniprot
Match: A0A7S2JXU4_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JXU4_9STRA) HSP 1 Score: 228 bits (580), Expect = 4.560e-69 Identity = 111/168 (66.07%), Postives = 133/168 (79.17%), Query Frame = 1
Query: 1 KGCLVASINRGCKAITQGGGCHAALLKDGITRAPCLRMPDAMAAAALKRWSDDPQNFESVRAAFQTTTNFGKLQGVTSTVAGRNVFLRFNCFAGDAMGMNMISKGVLAVMELLQKVFPEMQLVAISGNMCSDKKSAAINWIEGRGKSVVCEARIPSKYVEATLKTTVK 504
+GCLVAS NRGCKAIT GGG + LL+DGITRAPCLR A AAAL W+ +P NF ++AAF++TT+FGKL T TVAG+N +LR CF+GDAMGMNM+SKG LAV++LL++ FP ++LVA+SGNMC+DKK AAINWIEGRGKSVV EA IP V LKTTVK
Sbjct: 238 EGCLVASTNRGCKAITAGGGAVSTLLRDGITRAPCLRFESAAEAAALALWAQEPHNFAKLKAAFESTTSFGKLLSATPTVAGKNCYLRLKCFSGDAMGMNMVSKGSLAVVDLLRQHFPTLKLVALSGNMCTDKKPAAINWIEGRGKSVVVEATIPKDIVRTVLKTTVK 405
BLAST of mRNA_H-elongata_contig73929.15083.1 vs. uniprot
Match: A0A7S1YA95_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YA95_9STRA) HSP 1 Score: 230 bits (586), Expect = 4.680e-69 Identity = 112/167 (67.07%), Postives = 136/167 (81.44%), Query Frame = 1
Query: 1 KGCLVASINRGCKAITQGGGCHAALLKDGITRAPCLRMPDAMAAAALKRWSDDPQNFESVRAAFQTTTNFGKLQGVTSTVAGRNVFLRFNCFAGDAMGMNMISKGVLAVMELLQKVFPEMQLVAISGNMCSDKKSAAINWIEGRGKSVVCEARIPSKYVEATLKTTV 501
+GCLVAS RG KAITQGGG A +LKDGITRAPC+RM A AA LK W + PQNF+ ++AAF++TT+FGKL TVAGRNV+LR CF+GDAMGMNM+SKG LAV++LL++ FP++QLVA+SGNMC+DKK+AA NW+EGRGKSVV EA IP V +TLKTTV
Sbjct: 340 EGCLVASTQRGAKAITQGGGATAVVLKDGITRAPCVRMASAADAAKLKLWCEVPQNFQQLKAAFESTTSFGKLLSCNPTVAGRNVYLRLCCFSGDAMGMNMVSKGSLAVIDLLKRTFPQLQLVALSGNMCTDKKAAATNWLEGRGKSVVVEATIPQAVVRSTLKTTV 506
BLAST of mRNA_H-elongata_contig73929.15083.1 vs. uniprot
Match: A0A7S2I1A6_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I1A6_9STRA) HSP 1 Score: 226 bits (576), Expect = 8.990e-69 Identity = 109/168 (64.88%), Postives = 136/168 (80.95%), Query Frame = 1
Query: 1 KGCLVASINRGCKAITQGGGCHAALLKDGITRAPCLRMPDAMAAAALKRWSDDPQNFESVRAAFQTTTNFGKLQGVTSTVAGRNVFLRFNCFAGDAMGMNMISKGVLAVMELLQKVFPEMQLVAISGNMCSDKKSAAINWIEGRGKSVVCEARIPSKYVEATLKTTVK 504
+GCLVAS NRGCKAITQG G + +L+DGITRAPC+RM A AA LK W + P NF +++ AF++TT+FGKL V TVAG+NV+LR CFAGDAMGMNM+SKG LAV++ L++VFP++ LVA+SGNMC+DKK+AA NWI GRGKSVV EA IP+ V +TLKTTV+
Sbjct: 206 EGCLVASTNRGCKAITQGSGATSVILRDGITRAPCVRMSSAKQAADLKLWCEQPNNFATLKQAFESTTSFGKLLTVEPTVAGKNVYLRLQCFAGDAMGMNMVSKGSLAVIDHLKQVFPDLDLVALSGNMCTDKKAAATNWIHGRGKSVVIEATIPNHIVRSTLKTTVQ 373 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig73929.15083.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig73929.15083.1 >prot_H-elongata_contig73929.15083.1 ID=prot_H-elongata_contig73929.15083.1|Name=mRNA_H-elongata_contig73929.15083.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=171bp KGCLVASINRGCKAITQGGGCHAALLKDGITRAPCLRMPDAMAAAALKRWback to top mRNA from alignment at H-elongata_contig73929:1441..2756- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig73929.15083.1 ID=mRNA_H-elongata_contig73929.15083.1|Name=mRNA_H-elongata_contig73929.15083.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1316bp|location=Sequence derived from alignment at H-elongata_contig73929:1441..2756- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig73929:1441..2756- >mRNA_H-elongata_contig73929.15083.1 ID=mRNA_H-elongata_contig73929.15083.1|Name=mRNA_H-elongata_contig73929.15083.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1026bp|location=Sequence derived from alignment at H-elongata_contig73929:1441..2756- (Himanthalia elongata Himel1 dioecious)back to top |