prot_H-elongata_contig73811.15075.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig73811.15075.1 vs. uniprot
Match: D8LIC3_ECTSI (Ribosomal RNA-processing protein 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIC3_ECTSI) HSP 1 Score: 52.0 bits (123), Expect = 1.340e-6 Identity = 23/26 (88.46%), Postives = 26/26 (100.00%), Query Frame = 0
Query: 16 RYIGEVGDLVVGRISEVQSRRWSVEV 41
RYIGEVGDLVVGR++EVQS+RWSVEV
Sbjct: 63 RYIGEVGDLVVGRVTEVQSKRWSVEV 88
BLAST of mRNA_H-elongata_contig73811.15075.1 vs. uniprot
Match: A0A6H5KMR3_9PHAE (Ribosomal RNA-processing protein 4 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMR3_9PHAE) HSP 1 Score: 52.0 bits (123), Expect = 1.420e-6 Identity = 23/26 (88.46%), Postives = 26/26 (100.00%), Query Frame = 0
Query: 16 RYIGEVGDLVVGRISEVQSRRWSVEV 41
RYIGEVGDLVVGR++EVQS+RWSVEV
Sbjct: 63 RYIGEVGDLVVGRVAEVQSKRWSVEV 88
BLAST of mRNA_H-elongata_contig73811.15075.1 vs. uniprot
Match: B4E001_HUMAN (Exosome complex component RRP4 n=3 Tax=Homo sapiens TaxID=9606 RepID=B4E001_HUMAN) HSP 1 Score: 47.0 bits (110), Expect = 3.890e-5 Identity = 20/25 (80.00%), Postives = 23/25 (92.00%), Query Frame = 0
Query: 16 RYIGEVGDLVVGRISEVQSRRWSVE 40
RYIGEVGD+VVGRI+EVQ +RW VE
Sbjct: 75 RYIGEVGDIVVGRITEVQQKRWKVE 99
BLAST of mRNA_H-elongata_contig73811.15075.1 vs. uniprot
Match: A0A2J8UJB9_PONAB (Ribosomal RNA-processing protein 4 (Fragment) n=2 Tax=Hominidae TaxID=9604 RepID=A0A2J8UJB9_PONAB) HSP 1 Score: 47.0 bits (110), Expect = 6.420e-5 Identity = 20/25 (80.00%), Postives = 23/25 (92.00%), Query Frame = 0
Query: 16 RYIGEVGDLVVGRISEVQSRRWSVE 40
RYIGEVGD+VVGRI+EVQ +RW VE
Sbjct: 75 RYIGEVGDIVVGRITEVQQKRWKVE 99
BLAST of mRNA_H-elongata_contig73811.15075.1 vs. uniprot
Match: A0A2K5EZL6_AOTNA (Exosome component 2 n=4 Tax=Simiiformes TaxID=314293 RepID=A0A2K5EZL6_AOTNA) HSP 1 Score: 47.0 bits (110), Expect = 8.240e-5 Identity = 20/25 (80.00%), Postives = 23/25 (92.00%), Query Frame = 0
Query: 16 RYIGEVGDLVVGRISEVQSRRWSVE 40
RYIGEVGD+VVGRI+EVQ +RW VE
Sbjct: 41 RYIGEVGDIVVGRITEVQQKRWKVE 65
BLAST of mRNA_H-elongata_contig73811.15075.1 vs. uniprot
Match: A0A067C1K3_SAPPC (Ribosomal RNA-processing protein 4 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C1K3_SAPPC) HSP 1 Score: 47.0 bits (110), Expect = 8.330e-5 Identity = 20/26 (76.92%), Postives = 24/26 (92.31%), Query Frame = 0
Query: 16 RYIGEVGDLVVGRISEVQSRRWSVEV 41
RYIGEVGD+VVGRISEV S+RW V++
Sbjct: 59 RYIGEVGDIVVGRISEVGSKRWKVDI 84
BLAST of mRNA_H-elongata_contig73811.15075.1 vs. uniprot
Match: A0A1V9YVZ5_9STRA (Ribosomal RNA-processing protein 4 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YVZ5_9STRA) HSP 1 Score: 47.0 bits (110), Expect = 8.550e-5 Identity = 20/26 (76.92%), Postives = 24/26 (92.31%), Query Frame = 0
Query: 16 RYIGEVGDLVVGRISEVQSRRWSVEV 41
RYIGEVGD+VVGRISEV S+RW V++
Sbjct: 80 RYIGEVGDIVVGRISEVGSKRWKVDI 105
BLAST of mRNA_H-elongata_contig73811.15075.1 vs. uniprot
Match: A0A1V9YN11_9STRA (Ribosomal RNA-processing protein 4 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YN11_9STRA) HSP 1 Score: 47.0 bits (110), Expect = 8.560e-5 Identity = 20/26 (76.92%), Postives = 24/26 (92.31%), Query Frame = 0
Query: 16 RYIGEVGDLVVGRISEVQSRRWSVEV 41
RYIGEVGD+VVGRISEV S+RW V++
Sbjct: 80 RYIGEVGDIVVGRISEVGSKRWKVDI 105
BLAST of mRNA_H-elongata_contig73811.15075.1 vs. uniprot
Match: EXOS2_HUMAN (Exosome complex component RRP4 n=107 Tax=Tetrapoda TaxID=32523 RepID=EXOS2_HUMAN) HSP 1 Score: 47.0 bits (110), Expect = 8.620e-5 Identity = 20/25 (80.00%), Postives = 23/25 (92.00%), Query Frame = 0
Query: 16 RYIGEVGDLVVGRISEVQSRRWSVE 40
RYIGEVGD+VVGRI+EVQ +RW VE
Sbjct: 75 RYIGEVGDIVVGRITEVQQKRWKVE 99
BLAST of mRNA_H-elongata_contig73811.15075.1 vs. uniprot
Match: A3KFL5_HUMAN (Ribosomal RNA-processing protein 4 n=8 Tax=Hominoidea TaxID=314295 RepID=A3KFL5_HUMAN) HSP 1 Score: 47.0 bits (110), Expect = 8.670e-5 Identity = 20/25 (80.00%), Postives = 23/25 (92.00%), Query Frame = 0
Query: 16 RYIGEVGDLVVGRISEVQSRRWSVE 40
RYIGEVGD+VVGRI+EVQ +RW VE
Sbjct: 75 RYIGEVGDIVVGRITEVQQKRWKVE 99 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig73811.15075.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig73811.15075.1 ID=prot_H-elongata_contig73811.15075.1|Name=mRNA_H-elongata_contig73811.15075.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=42bpback to top |