prot_H-elongata_contig73809.15074.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig73809.15074.1
Unique Nameprot_H-elongata_contig73809.15074.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length48
Homology
[Close]
BLAST of mRNA_H-elongata_contig73809.15074.1 vs. uniprot
Match: D7FK06_ECTSI (CRAL/TRIO domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK06_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 1.770e-16
Identity = 33/48 (68.75%), Postives = 38/48 (79.17%), Query Frame = 0 
Query:    1 KWRESYGIDTILDEDLSSAGLGKEFFWCGFDRAGRPCLVFRASEHSKS 48
            +WR +Y +DTILDEDLS  G+  EF+W GFDR GRPCLVFRA EH KS
Sbjct:   78 EWRTTYKLDTILDEDLSGTGVSHEFYWSGFDRDGRPCLVFRACEHRKS 125
[Close]
BLAST of mRNA_H-elongata_contig73809.15074.1 vs. uniprot
Match: A0A6H5KAS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS6_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 3.300e-16
Identity = 33/48 (68.75%), Postives = 38/48 (79.17%), Query Frame = 0 
Query:    1 KWRESYGIDTILDEDLSSAGLGKEFFWCGFDRAGRPCLVFRASEHSKS 48
            +WR +Y +DTILDEDLS  G+  EF+W GFDR GRPCLVFRA EH KS
Sbjct:   78 EWRITYKLDTILDEDLSGTGVSHEFYWSGFDRDGRPCLVFRACEHRKS 125
[Close]
BLAST of mRNA_H-elongata_contig73809.15074.1 vs. uniprot
Match: A0A7S2GJ01_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GJ01_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 2.210e-8
Identity = 20/45 (44.44%), Postives = 30/45 (66.67%), Query Frame = 0 
Query:    1 KWRESYGIDTILDEDLSSAGLGKEFFWCGFDRAGRPCLVFRASEH 45
            +WR+++G++ +L ED S   L +E +W GFD AG P LV  A+ H
Sbjct:   59 EWRDTFGLEQLLQEDFSDMDLRREVYWEGFDLAGHPVLVINAARH 103
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig73809.15074.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FK06_ECTSI1.770e-1668.75CRAL/TRIO domain containing protein n=1 Tax=Ectoca... [more]
A0A6H5KAS6_9PHAE3.300e-1668.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2GJ01_9STRA2.210e-844.44Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036865CRAL-TRIO lipid binding domain superfamilyGENE3D3.40.525.10coord: 1..48
e-value: 3.9E-6
score: 28.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig73809contigH-elongata_contig73809:65..208 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig73809.15074.1mRNA_H-elongata_contig73809.15074.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig73809 65..208 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig73809.15074.1 ID=prot_H-elongata_contig73809.15074.1|Name=mRNA_H-elongata_contig73809.15074.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=48bp
KWRESYGIDTILDEDLSSAGLGKEFFWCGFDRAGRPCLVFRASEHSKS
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036865CRAL-TRIO_dom_sf