prot_H-elongata_contig7375.15067.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7375.15067.1
Unique Nameprot_H-elongata_contig7375.15067.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length37
Homology
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BLAST of mRNA_H-elongata_contig7375.15067.1 vs. uniprot
Match: D8LN51_ECTSI (Whsc1 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN51_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 3.860e-11
Identity = 27/34 (79.41%), Postives = 29/34 (85.29%), Query Frame = 0 
Query:    1 MECAPGRCPTLRGGAKYCLNTIIQTKSFPTTEVF 34
            MECAPGRCPTLRG +KYC N  IQTK+FP TEVF
Sbjct:  305 MECAPGRCPTLRGASKYCNNNAIQTKTFPATEVF 338
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7375.15067.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LN51_ECTSI3.860e-1179.41Whsc1 protein n=1 Tax=Ectocarpus siliculosus TaxID... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7375contigH-elongata_contig7375:7217..7327 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7375.15067.1mRNA_H-elongata_contig7375.15067.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7375 7202..7327 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7375.15067.1 ID=prot_H-elongata_contig7375.15067.1|Name=mRNA_H-elongata_contig7375.15067.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=37bp
MECAPGRCPTLRGGAKYCLNTIIQTKSFPTTEVFSR*
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