prot_H-elongata_contig73745.15066.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig73745.15066.1
Unique Nameprot_H-elongata_contig73745.15066.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length384
Homology
BLAST of mRNA_H-elongata_contig73745.15066.1 vs. uniprot
Match: A0A6H5K2S4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2S4_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 3.820e-41
Identity = 142/386 (36.79%), Postives = 180/386 (46.63%), Query Frame = 0
Query:   24 HEKSRRDLARRKRHILVSSLRVTSASECSHREPSGKAVGKSRKAAS---SSLEFLDVDVFFPSREMEIVGCRRRDSPESDVDVDVDTLVNLEPYRREVAAQRPATFGHRPTSASRMFTPNPSPMETLSHVPG-------GAIFGERNQLGWEGFWSRKAEPREVRMPNAPKPIMAGGEKKRRALGLSAIMLKELLSGENKC-----------QXXXXXXGRKRGIRVPKVAQAPCHAVLGLNMMGAKDGSSRGSLGERGSPYGTWLSASGDANRCGQEALNVTSA----SQSSNLGHHMGQPVAVQSPEEAELRRIFFGDRP-WDGTPALLPRPQDVRRAINLLSMPDPDERLCEKFVKTRKLAAGIPVTASSIHDEARRVAKLTN 383
            ++K  R+ +R+KR++L  S+R  SAS+ + +  + K    +R+ ++   S L+  D+  FF    ME     R   P   V+VDVDTL  LEPYRREV AQ+P TFGHRP SASRMF  NP  M T   +P        G I G +   G           R                K RR  GLSA MLK LL G+              Q           I     A  P + VL       ++  +  S+         W S   D  R   EAL    +    S  S LGH  G+     + E  EL RIF  +RP WDG PA LP PQ  RRAI+ L MPDPDERL +K +K+RK AAG+PVTASS  DE  R  +  N
Sbjct:   56 NKKPFREFSRKKRNLLAWSIRAASASDAAAQSTANKTHMPTRRLSTTVRSDLDGTDIGEFF---NMERGMSGRVLHPTDRVEVDVDTLPTLEPYRREVVAQQPITFGHRPLSASRMF--NPCTMATSCGIPSDGHHPSTGGIRGRKKGGGGHXXXXXXXRGRN--------------SKPRRTTGLSAPMLKALLRGDTPTGEGGAALVTASQHQQELFEPNGNIVSRDSAPKPNYLVLD-----GQEDLTDSSVNSEKLDESKWRSVD-DLGR--GEALGELESWLQTSSHSGLGH--GRRRLGNTKEGQELHRIFSSERPPWDGAPAPLPAPQHTRRAISSLLMPDPDERLRDKLIKSRKAAAGVPVTASSTKDERERELRPFN 412          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig73745.15066.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K2S4_9PHAE3.820e-4136.79Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig73745contigH-elongata_contig73745:94..2147 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig73745.15066.1mRNA_H-elongata_contig73745.15066.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig73745 94..2147 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig73745.15066.1 ID=prot_H-elongata_contig73745.15066.1|Name=mRNA_H-elongata_contig73745.15066.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=384bp
MKNPSLGKLTSADLRRTASFTVDHEKSRRDLARRKRHILVSSLRVTSASE
CSHREPSGKAVGKSRKAASSSLEFLDVDVFFPSREMEIVGCRRRDSPESD
VDVDVDTLVNLEPYRREVAAQRPATFGHRPTSASRMFTPNPSPMETLSHV
PGGAIFGERNQLGWEGFWSRKAEPREVRMPNAPKPIMAGGEKKRRALGLS
AIMLKELLSGENKCQNKCQNQGRKRGIRVPKVAQAPCHAVLGLNMMGAKD
GSSRGSLGERGSPYGTWLSASGDANRCGQEALNVTSASQSSNLGHHMGQP
VAVQSPEEAELRRIFFGDRPWDGTPALLPRPQDVRRAINLLSMPDPDERL
CEKFVKTRKLAAGIPVTASSIHDEARRVAKLTN*
back to top