mRNA_H-elongata_contig73616.15051.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig73616.15051.1 vs. uniprot
Match: A0A6H5L2F9_9PHAE (DUF3395 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2F9_9PHAE) HSP 1 Score: 176 bits (447), Expect = 1.430e-46 Identity = 116/237 (48.95%), Postives = 135/237 (56.96%), Query Frame = 2
Query: 8 RAEQEPVVRRRMERTVRDAANQSRLMAHMAGRNKAEEERKGGLIIVCARYGSQLSADYGMHWWSETSNLPAAGAAPAE----------EGVSLRDGVAVEQVGAANVDVTVPLQFFVKNSTLSLPPGSKSSLLGFYTPASCRPPR-----ASYGLSLRERHRDVWGHFSPNSGWDNARLFGEDAGMDEWSS-LPEA--QLYIRYEFAGRTFEDTLQDKVEVVLPSPSSIYRGSLEAR 664
R+E EP+ RRR+ R DAA+Q RLM HMA + + EE KGGL+I+ ARYG+ LS D G WW++ AAG A E AVE V NVDVTVPLQFFVK+STL+LP GSKS LLGF+TPA CR PR + Y R + RD WG GE G W S LP A QL IRY FAGRTFE+T +D EVVLPSP+S Y G R
Sbjct: 310 RSEGEPLRRRRLARDWGDAASQVRLMVHMADKRRHEEMEKGGLVILLARYGADLSRDCGERWWAQAPQNAAAGGGTAGTPAMPLSGLVESEGPEGAAAVELVSQPNVDVTVPLQFFVKDSTLTLPFGSKSHLLGFFTPAPCRLPRREPRYSDYREGARSQERDGWG--------------GEGTGG--WGSPLPAAAAQLRIRYLFAGRTFEETFRDCQEVVLPSPTSTYLGDSSVR 530
BLAST of mRNA_H-elongata_contig73616.15051.1 vs. uniprot
Match: D7G304_ECTSI (Heat shock protein 40 like protein/ DnaJ domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G304_ECTSI) HSP 1 Score: 172 bits (435), Expect = 3.130e-44 Identity = 110/236 (46.61%), Postives = 133/236 (56.36%), Query Frame = 2
Query: 8 RAEQEPVVRRRMERTVRDAANQSRLMAHMAGRNKAEEERKGGLIIVCARYGSQLSADYGMHWWSETSNLPAAGAAPAE----------EGVSLRDGVAVEQVGAANVDVTVPLQFFVKNSTLSLPPGSKSSLLGFYTPASCR-----PPRASYGLSLRERHRDVWGHFSPNSGWDNARLFGEDAGMDEWSSLPEA--QLYIRYEFAGRTFEDTLQDKVEVVLPSPSSIYRGSLEAR 664
R+E EP+ RRR+ R DAA+Q RLM HMA + + EE+ KGG++I+ ARYG+ LS D G WW++ AAG A E AVE V NVDVTVPLQFFVK+STL+LP GSKS LLGF+TPA CR PP + Y + R WG +GW LP A QL IRY FAGRTFE+T +D EVVLPSP+S Y G + R
Sbjct: 412 RSEGEPLRRRRLARDWGDAASQVRLMVHMADKRRHEEKEKGGMVILLARYGADLSRDCGERWWAQAPQNAAAGGGTAGTPAMPLSGLVESEGPEGAAAVELVSQPNVDVTVPLQFFVKDSTLTLPFGSKSHLLGFFTPAPCRLPRREPPSSDYREGAHSQERYGWGG-EGTAGWG--------------PPLPAAAAQLRIRYLFAGRTFEETFRDCQEVVLPSPTSAYLGDSDVR 632
BLAST of mRNA_H-elongata_contig73616.15051.1 vs. uniprot
Match: A0A835YTL3_9STRA (J domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTL3_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 4.230e-9 Identity = 45/110 (40.91%), Postives = 57/110 (51.82%), Query Frame = 2
Query: 140 IVCARYGSQLSADYGMHWWSETSNLPAAGAAPAEEGVSLRDGVAVEQVGAA------NVDVTVPLQFFVKNSTLSLPPGSKSSLLGFY--TPASCRPPRASYGLSLRERH 445
I+ ARYG+ L ADYG W+ + N +G +G A + AA N+DVTVPLQFFV LSLP G+KS+LLGFY T S+GL + H
Sbjct: 709 ILAARYGAALHADYGAQWFLQADNGGTSG--XXXXXXXXENGEATDAARAALACEPRNIDVTVPLQFFVARGALSLPAGAKSALLGFYPVTEGLEHAAPQSFGLGVPRGH 816
BLAST of mRNA_H-elongata_contig73616.15051.1 vs. uniprot
Match: A0A7S3XUL5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUL5_HETAK) HSP 1 Score: 66.2 bits (160), Expect = 6.910e-9 Identity = 60/194 (30.93%), Postives = 82/194 (42.27%), Query Frame = 2
Query: 50 TVRDAANQSRLMAHMAGRNKAEEERKGGLIIVCARYGSQLSADYGMHWWSETSNLPAAGAAPAEEGVSLRDGVAVEQVGAANVDVTVPLQFFVKNSTLSLPPG-SKSSLLGFYTPASCRPPRASYGLSLRERHRDVWGHFSPNSGWDNARLFGEDAGMDEWSSLPEAQLYIRYEFAGRTFEDTLQDKVEVVLPS 628
T AA Q+ LM +A ++ +E + GL+I+ ARYG+++ Y W+ + + VE+ N+DVTV LQFFVKNS L LP G SKS LLGFY A RH +G S P +L++RY + G +E D V LPS
Sbjct: 52 TRESAAAQALLMEKLAHSSREQEMEENGLVILEARYGNKVWKCYDPFWYKKKPDSK----------------TLVEE---ENIDVTVQLQFFVKNSELLLPAGQSKSLLLGFYDAA---------------RHAREYGRASAAXXXXXXXXXXXXXXXXXXXXXP--RLFVRYRYKGTAYELEAGDYQGVRLPS 209
BLAST of mRNA_H-elongata_contig73616.15051.1 vs. uniprot
Match: K3W6H1_GLOUD (J domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6H1_GLOUD) HSP 1 Score: 68.2 bits (165), Expect = 1.110e-8 Identity = 64/211 (30.33%), Postives = 96/211 (45.50%), Query Frame = 2
Query: 62 AANQSRLMAHMAGRNKAEEERKG---GLIIVCARYGSQLSADYGMHWWSETSN---LPAAGAAPAEEGVSLR--DGVAVEQVGAAN------VDVTVPLQFFVKNSTLSLPPGSKSSLLGFYTPASCRPPRASYGLSLRERHRDVWGHFSPNSGWDNARLFGEDAGMDEWSSLPEAQLYIRYEFAGRTFEDTLQDKVEVVLPSPSSIYRGS 652
A Q +LM A + +E++K GL+I+ ARYG ++ +T++ L + G A ++ R +G +Q AA VDVTVPLQFFVK+S+LSL SK+ LLGFY P + S+++ D + + +LY+RY + G+ FE T +D V LPS + GS
Sbjct: 453 AIAQQKLMMQCAQKKMEKEKQKADKKGLVILVARYGKNPTSPDPRERQGDTADSDVLYSGGGAESDSEDEARRGEGADGDQEAAAELLEQKWVDVTVPLQFFVKDSSLSLHGTSKAGLLGFYNPC------IDHDQSVQDT-------------------------QDLSFAADKPKLYVRYAYDGKVFEATFEDDQVVDLPSRYAQVMGS 632
BLAST of mRNA_H-elongata_contig73616.15051.1 vs. uniprot
Match: A0A8K1FHR5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHR5_PYTOL) HSP 1 Score: 64.7 bits (156), Expect = 1.410e-7 Identity = 63/202 (31.19%), Postives = 86/202 (42.57%), Query Frame = 2
Query: 56 RDAANQSRLMAHMAGRNKAEE----ERKG-GLIIVCARYGSQLSADYGMHWWSET---SNLPAAGAAPAE-EGVSLRDGVAVEQVGAAN--VDVTVPLQFFVKNSTLSLPPGSKSSLLGFYTPASCRPPRASYGLSLRERHRDVWGHFSPNSGWDNARLFGEDAGMDEWSSLPEAQLYIRYEFAGRTFEDTLQDKVEVVLPS 628
R A +Q +LM A + E +R G GL+I+ ARYG + M + T + P E E D A E A VDVT+P+QFFV++S+++LP SK+SLLGFY P + G+D+ E E QLY+RY + FE T +D V LPS
Sbjct: 443 RSALSQQQLMVRCADEKRQAEHQRTQRDGKGLVIILARYGKDPTNPDPMDATAATRVPQGSDSDDETPTESEPTRSVDDEADEATELARQWVDVTIPMQFFVQDSSVTLPASSKASLLGFYNPCA-----------------------------------GDDSAQTE-----EPQLYVRYAYDSLVFEATFRDAQAVQLPS 604
BLAST of mRNA_H-elongata_contig73616.15051.1 vs. uniprot
Match: A0A024TUS9_9STRA (DUF3395 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TUS9_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 3.500e-7 Identity = 61/198 (30.81%), Postives = 81/198 (40.91%), Query Frame = 2
Query: 62 AANQSRLMAHMAGRNKAEEERKGGLIIVCARYGSQLSADYGMHWWSETSNLPAAGAAPAEEGVSLRDGVAVEQVGAANVDVTVPLQFFVKNSTLSLPPGSKSSLLGFYTPASCRPPRASYGLSLRERHRDVWGHFSPNSGWDNARLFGEDAGMDEWSSLPEAQLYIRYEFAGRTFEDTLQDKVEVVLPSPSSIYRGSL 655
A +Q LM A +N A + GG+ ++ ARYG S H E+S E V NVDVT+P+QFF++N L LP SK+ LLGFY P + G + P DA S + LYIRY F G +E T D +VVLPS + + G +
Sbjct: 321 ALSQQTLMGKQAAKNTALD---GGVNVLVARYGQNPST---AHDCDESS---------------------FEHV---NVDVTIPVQFFLQNGRLYLPSTSKAGLLGFYNP--------------------MLGLYDP-----------ADA-----SHPAQPHLYIRYAFDGHVYEATFGDLQQVVLPSAHAQHMGQV 452
BLAST of mRNA_H-elongata_contig73616.15051.1 vs. uniprot
Match: A0A024TSG4_9STRA (J domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TSG4_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 4.190e-7 Identity = 61/198 (30.81%), Postives = 81/198 (40.91%), Query Frame = 2
Query: 62 AANQSRLMAHMAGRNKAEEERKGGLIIVCARYGSQLSADYGMHWWSETSNLPAAGAAPAEEGVSLRDGVAVEQVGAANVDVTVPLQFFVKNSTLSLPPGSKSSLLGFYTPASCRPPRASYGLSLRERHRDVWGHFSPNSGWDNARLFGEDAGMDEWSSLPEAQLYIRYEFAGRTFEDTLQDKVEVVLPSPSSIYRGSL 655
A +Q LM A +N A + GG+ ++ ARYG S H E+S E V NVDVT+P+QFF++N L LP SK+ LLGFY P + G + P DA S + LYIRY F G +E T D +VVLPS + + G +
Sbjct: 441 ALSQQTLMGKQAAKNTALD---GGVNVLVARYGQNPST---AHDCDESS---------------------FEHV---NVDVTIPVQFFLQNGRLYLPSTSKAGLLGFYNP--------------------MLGLYDP-----------ADA-----SHPAQPHLYIRYAFDGHVYEATFGDLQQVVLPSAHAQHMGQV 572
BLAST of mRNA_H-elongata_contig73616.15051.1 vs. uniprot
Match: A0A225WBP4_9STRA (DUF3395 domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WBP4_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 1.630e-6 Identity = 57/203 (28.08%), Postives = 78/203 (38.42%), Query Frame = 2
Query: 62 AANQSRLMAHMAGRNKAEEERKG---GLIIVCARYGSQLSA-----------DYGMHWWSETSNLPAAGAAPAEEGVSLRDGVAVEQVGAANVDVTVPLQFFVKNSTLSLPPGSKSSLLGFYTPASCRPPRASYGLSLRERHRDVWGHFSPNSGWDNARLFGEDAGMDEWSSLPEAQLYIRYEFAGRTFEDTLQDKVEVVLPS 628
A Q +LM A +E+++ GL+I+ RYG ++ D + E G G S+ E + VDVT+PLQFFVK+ L+L SK+ LLGFY P + E SP SS + LY+RY + G+ FE T D V LPS
Sbjct: 344 ALEQQKLMCRCAKEKMEQEQQREDGKGLVILLGRYGKNPTSPDSREARGDDLDKALQAMREQDLNGDGGEVETSNGDSVTQEADSELLEQKWVDVTIPLQFFVKDGELALTSSSKTGLLGFYNPC------------IGEDQTIADAQLSP-------------------SSAVKPLLYVRYAYDGQVFEATFDDNQAVSLPS 515
BLAST of mRNA_H-elongata_contig73616.15051.1 vs. uniprot
Match: A0A1E7EXQ6_9STRA (DUF3395 domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EXQ6_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 2.100e-6 Identity = 59/197 (29.95%), Postives = 82/197 (41.62%), Query Frame = 2
Query: 56 RDAANQSRLMAHMAGRNKAEEERKGGLIIVCARYGSQLSADYGMHWWSETSNLPAAGAAPAEEGVSLRDGVAVEQVGAANVDVTVPLQFFVKNSTLSLPPGSKSSLLGFYTPASCRPPRASYGL--SLRERHRDVWGHFSPNSGWDNARLFG---EDAGMDEWSS--LPEAQLYIRYEFAGRTFEDTLQDKVEVVLP 625
RDAA Q LMA A R E + GLII A Y S G W +VT+PLQF+V NSTL LP KS LLGFY + ++ + S R + W + W++ LF ED + ++ LP L + YEF ++++ T++D E+ LP
Sbjct: 752 RDAAIQKELMARQASRKTKNEAERDGLIIKDAIY----SIRNGDEW-----------------------------------NVTIPLQFWVSNSTLKLPARRKSELLGFYDIVTSMKNNSTLSVNSSNGRRRKSSWSYV-----WND--LFDWTPEDVLLRRKAAAELPSPTLTVSYEFKNQSYQITVKDSEELRLP 902 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig73616.15051.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig73616.15051.1 >prot_H-elongata_contig73616.15051.1 ID=prot_H-elongata_contig73616.15051.1|Name=mRNA_H-elongata_contig73616.15051.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=209bp MERTVRDAANQSRLMAHMAGRNKAEEERKGGLIIVCARYGSQLSADYGMHback to top mRNA from alignment at H-elongata_contig73616:834..3071+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig73616.15051.1 ID=mRNA_H-elongata_contig73616.15051.1|Name=mRNA_H-elongata_contig73616.15051.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2238bp|location=Sequence derived from alignment at H-elongata_contig73616:834..3071+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig73616:834..3071+ >mRNA_H-elongata_contig73616.15051.1 ID=mRNA_H-elongata_contig73616.15051.1|Name=mRNA_H-elongata_contig73616.15051.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1254bp|location=Sequence derived from alignment at H-elongata_contig73616:834..3071+ (Himanthalia elongata Himel1 dioecious)back to top |